XLOC_006159 (gene) - C. hemisphaerica

Overview
NameXLOC_006159
Unique NameXLOC_006159
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000119:191781..199157+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006159 ID=XLOC_006159|Name=XLOC_006159|organism=Clytia hemisphaerica|type=gene|length=7377bp|location=Sequence derived from alignment at sc0000119:191781..199157+ (Clytia hemisphaerica)
CTTAAACAATACATCTTTAATTAACTTTAATGTTTTAgataaagaaattt aaaagatATCACATTGATATGATGGCAAGCTTGACCTGGAAGAAATCAAG GAAAAATGTCTCTTCTTCTGCTGCCAAACTCtttcaaaatgaagatgaag aagaaaatgaagaagaaattatAGAAGATTGGAGAGATATTGTTCCATCA AAAAAGAGTAAAGTAATGTTGGAAGATGGTGTCCAGAAAAGTAAACGTCT AGTCAATGATGCAACCCAACTTGCAGACGAAGAGAGGTGGGTTTATAGCC ATAAGTTTTGTATTTTAAATACCCCATGTCCTATTTCAATATAATCAACT TGATCGTTCACTGTGGCTTTTTATTTCAATCCCCTAGTGATAATAGTTAT TTGCCATCATAGATTAAGTATTTGCTTTGCTTCCAGTAGTATTTCTGAAG GATCATTTTAAAATCTATCTTTGATCCGGAGAATTTTAATTTTCTACAAA ATAGGACATTTTCATCATCTAACATTATTTCTTTCTTTAGGTATTGGGAA GCATTGCAAAAATTTGATGAGGCTTTATCATTCACACCTCTTAATGAAAA GATACACGAAATGAAAGCACAGGTAATTCTTCAGTGATGTTTATTGTACT GGGTGTTAGATTGAACAAGATAACATGTGACATGCTTAGATAGTTCAACT AAGGCTTTAGTAAAGTGATGTGAATTATTCTTCCCTCGAAATCATTTCTC ATTTTCTATCCGGTAGATATATAATCGACTTATCTTCACATAACTTACTA TAATTTccttaagagccagtttttttttaaacagggCAGGtacaatagtt tgaaacttactAAAACttagtaaaatcccaaaatattttgatcttaaaat ccataatggcagatttatgccaatttgaagtttgAACAGGAACAAACTCC CCTGGGACAGGTCAGGtggctctaaaatacccctaaaatcaaatacttag tgtttttgtgacgtcttaactccagctaccattttgaaaatcttggtttt tttgaaaattgtatagtTTGCCGaccatagtttcagaatcaccaAAAACC AATCCCTCATTTTGATTCGAGAAAGTATGGTTCtctatcaaaacaaattt taactggaatgcccaaaaatgtcaaaaacttcaaattggcataaatctgc cattatggattttcagaccaaaataatTTGGTTTTATTCTATCTTCTATA CTaattgagtttatgaaaaaactttgtaacgctagcccagtaacatatgt taaAGCCATTGACtttttacatagttataatgtatgttgattcagcagat tgaaataaatagaatcttttgtaatgaataaagaaaatgtggagcaagat ttttttcttccttttatttacaaatttgaaaggactcttttattaaaatt ttgctgacatcagtttcagacgagtcgggtgtatataacaccgtataatt cctttaaggtttctaaaatttgaacgccgcggctggaaaacctatccacc ttcgatacaaaaagtctcacgctaagtttgacaagcgtagaaaactcgga ttagagaagactctacacggctatttgtaaacgaaaaaagttctgacgtc aatttcatgcaaaagtactgcgacgtcacaaagtttcaaataaaaaggtg tggcattttGTTGCACAATTTCGAATTATTTCATATCAACACAagcaaca aaatccaacattgttgtttgatgattaaacttcgtctaacattatttaaa aaggtttcaatgttggttgcattgcatatgcgccggtcttaagctgtccg catgtgaagccaacaaacgggaaaaccttcagtgctcaatctcaaagcgc gagcctctccttcacaactaaggctttttctttcctagaagcaatcctct caccacctcagacacctttgggcgtctgcaacgacgggtaccctcgataa ttttgacagggtcactatatggcatttcattgaacacaaacttccgttat cttaaaaagacatatcatcgaggcttacagacacaaaattttgactaatg tagaaagtttagatgtataatttttattattgtattcggcattttaagcc aaaacgatgtcaggcATTAACctacattatagtattttaaaggcttttgt tgtgcaaggaaaaccgttaaccggcgtttgcgacgacgggaaccgtctag ttatATACTATTCTAttatatccaaaaatgaaaaaaaaactaagtttcaa actattggatcTGCCCCAAACTGCCCCATTCTTAAAAAAGCTGACTCTTA ATATCTGACTAATGCGCCTGGTGTAGTGAAGCATTGATACTCTGTAATGG CAtactttaaatttaatttttaattgatGGATCAAGCGCtttaaatagta tttttttatgatttttcagaTTCTTCTAGAACTTGGAGAAATTTTCCCAG CAGTACAAGCTGCTGAGCAAGTTGTCAAATTGAATCCAACATGGGCTGAA GGTTTCCAAACATTGGGTAGAACACAGATTAGCATTGGAGAAATTGATAT GGTTTGTTTGTTCAACTTTTATGTTAACTTCCCCATGTCCAAGTTGTAAA TTTGGTTGCTTTTGGATAAATGTTTACTCAAAACATTTCCAGTATAATAA GACAACAACAGCAGTTTGACATTTGATAGGTGTATTTAAACCTTTTAATT CAGTGTTGATTCCCCATCATCACTAACTCAAATAAATGATATGATATTTT ACTTCTCAGGCGCTGAAAAATTTTTGTCGAGCTTATCATCTGAATCCTAC ACTTGACGATGTGAGTCCAATTGTATTTAATTTATTCAACTTCTGCTAAT ATCTTATTTTTCTCATAATGTCATGATTTACATAATTCCAAAGGGGGGGG TCAATACACCCCCTAGTCTAGAGCAACCCCCAAGTCCAGGTCCAGTCCCC TCTCAAAATTTTATGGAACCTCCGCCCCCACCTCAAAATTAGGGTGTCAT TGGGTTTTCCCCCACTTTCAAGACATTATGCACCACTCATATTAACTAAA ATAAAAGCATATTCACTCTTTAAAAGTGTTGCTTTTGAGTCAATTCATTA GTATCAATCAATTCAAGAAATTGGTTGAAATACATTTCAAGCGAAgcgag aaagaaaattttaaggattttaaccCAGTCCAAGACTGCAAAACGAGATA TTTGGAAAGATGGCTTCAAAGAACTTTGCCAACGCATTAATCCATCCTTT CTTCATGACTGTTCccctttttgaaaactttcccatttccacaagaaata tttttagccctcccccccccctttctgtGATTTTTAGAACATCTCTACCC CCTTCCCTTTAATAAAAGAgggggggggtgcaaactatgattTATGGGAA TTTGGTTGGTCTTTTTTAATCTCTACGTGAAtctaaaatttttcgctgat tttGTAAATTCATATGTTGgtttttatccttttttatccagctgaagaaa ttcaaaacattttgtaTAACATACAGCAGGGTTTATCCACATGTCAGGAA TACCATCACTGCGTATTATGGAATGATGGCCTTTTAAACaccagaaaata ttaaaatccaAGGAATGTTTCATTTCTAAATGTGATATGATGAGACATTT TATTTGATAGAAAGTAGGAGATTAATAAGGAAGAAACTCCTGAATCTAGC CtctaaaatttgtaaatttttctctaattctaTTTTGAACCATAGCTATT CGAAGAAGACATCAAATGGGCAAGAGAACTTCTCAAACAGAaagaagaaa tgaagaaaactgAAGAATCAAAAGAAACTGAACGTAGTAAtggtgaagaa gaaaaatgcgCTAAATGTCACCGATGTTTCAAAGTCAATGAGAAAGCCTT GTCCATGAATGGTAACGAAGAAAAGAGAACAGAAGATGAGATACCAAAAA CATGAGTAAGTTTTAATTCCATTTTTATTTACTGTTTGTATTTCGAGGGA TTGAGTTTAGTCGGTGTTGATATTCTTCATATATAACTCTGGTATCAACA ATGCCAAAGAATGTCAAGATTTTAGCCCATAACGTTAGTTTTGAAATTAG TTTTCCCTCTTTCAACATACTTTATAACATGAATATTAGGAGACGTGTAA CCAACAGGAATGGATAATTCTCGTGTTAATAAAATCCCCGTTAATTTTTG AAGGTTTACTCATAAACCTGCTCATTTGTGTCAATTTGTGATgttgtgtt aatttcaaggccgttaaatgcttccatacttatattcatgtaataaggtt TATTCGATTCATGATCAATCGAATTTTTTCGACAGTTGAATTCAACCAAA TTTGAGCGACGAtttgtcgaaccaatcaaatttgacCAATGATTAATCGA ACTCGATCGATCGAGTTTGATTGTTGAttgatcgaacgcaatcgaactcA GTTACATATCAATGTAACTCGATGTGTGGTCATAGATTTGTAAAAGCCCG AAGTACTAGATGTGCtcttgctgaaaagtgtgccgaggttaggtaggaaa tcctagaatttcagcgtttgaccaatcagaagtttcacgggttttcgaaa acaatagcaataatattttttccgatattcaatttttttgcctgcaattg cttaaagcacgccatctagcccttcgggctttataaatctatttgTACGA TTCACTTTGATTGCCATCCCGTGAAATTAGTATTTAGTTTATCAATTTTC CAAAGAGATGCacaattttctttataagaacaattttataagaacacgag gctgaaaattggccgGAACCCAAGAACAAATTAAGTACAATCCTCAGCCT AAGATTTCAGAAATCACTTATAGAAAGTtctgattttaacagattttaag tttttatgtaaagaaactaagcgttttaagaacatcgtaaggaCATTTAA GcctggaaattttaaaagaattaagCCCACCCTGAGCCTAAAACtactgt ttcttataaaaaaaagtgtatttagTTGGTTGACGATCCAGTCGAAAACG GCTTCATAAAATGTCTCCTTAAATTTTCTGGTTATACGAgctcaaaaaat gtcatatgagCATTAGAATTCTGGatttaaacattaaaaattcTCTTAAC TTAGAATATCTTTCATTACTAATGTAAATTTTATGATGTGACACGTATAA ATTTTGTGATGACAAGTTCATCGAGATAATGAACAGATGTGCAAAGTTTT CATTTTGAGAAAGGGCTGATCAATCTTAATGACTCCATATTTGGTCATCT CCTTATAAGGACTTTGTGTGATATATCATTTCTGCTAATATTTGACGGAC CAACGCACACaaatcttttcaactttttctttaaGCTTTTGAGCTTTTTT AGCTTGAGTTGTAACTTTTACATCAATTATAACACCAAATTAATATTTCC ATAGCTCAGCAATGTCTTAAGCAgccattttttaaaacatagcCATGGCC CTTACCAAGCCAAAAATTCACAAACAACTATGGTTAAAAAACCTATTTCA CTCACAATTTCCAAAATGTTCCTTTCTATACGTTAACTGTAACTAATGGG AAAACGTTGTTTTGTGATaatattttaataataattGGTCATCCGTATGA ATTTTGattcaaattgattttgatattttcgatGTTGTCATTCTGAAGTG TTTACTAGGGACCAAGGAATGATCAGTCTATCAACCCCTAAACATCAAAA TTGGTTTAATACATTGGGCTATTCTAGAAATGGTCTGtaccctatgttga ggaggagtgacgtccagggtggtctaaGAAGGGTCTGGTTTTCGAGTATA GAAATCCAgcgtggtcagtaaaatgagggtgaaaatccagggtggtcagt aaaatgagagtgaaaatccagggtggtcagtaaaacgaggtcgTAAATCC AGACCTCAAATTCTTTCGGAATGAGCCCATTAGGTTTGCGTCTtaagtgt tttctttttaattttaccttTTAAGACGTCACGTTTTAAGATCTCTAGAG AAGGAATAAGCTTAAGCAAAAGTCCATTGAAACGAAACTTTCCGTCTCAA TAAGCCTTCTATGGCTCATGGTACTAAACCCTTTTGTACAAGCCATTGTT TGGCTCGCCTAAGAGCTTACTTAGCCATTCAATAACAGTTGCTTAGCCAT TTAATGATTAGCAGTTTTCGATATTTAAACTGAGCCATCGCCCTTCCATA TCTTCAGTTGCATATCAGCGCTCACACCAGAATTACTTTTTGAGAGAATT CCTTCGTTATTTTTTCTTCTACTTCACAAGATGAGCGAAATCACTGATGA TCAACTCGAAGAATTGAGAGTAAGTGTGACCATTATTTGTCTTTCTTCGT GAGATGACTTGTAAGGCAGTAAACGTGGCCTCACATCCCGAGGGAATACC CACATCGATCAGGTTGTCTTGAGACTGTTTATTTTCTGGAATTGGGAAAA ACCTTTGTTGAATTCTTTTTGCAATCCTTTGAGCATCCTGACAGACTGAA GACCGCCAGGCCTACTTAAGAAATCTAATCAAAGGTGTTTCTTTTgtgaa taaataaaaacattttagttTCGAGTATATCCCTACGTTTCTATTGTTTT AGGACGCTTTCACACTTTTCGACAAAAAAGGCGACGATAAAGTCGAGTTT AGTCAAATCATCGACGTCTTGCGATCACTCAAACTCAACCCACTCACGAC AGATGTCGAAAAAGTCATCAAAGATTCCGGCTTAGAAGGCACCCGTGTCG ACTTCGCTACTTTCGCTAGCATTTACGAGCAATTCAAGAAACGGCCATCA ATCGCTAACCGTGATGATTTAATCGAAATGTTCAAAACGTTCGATCGTGA CAGTTCAAAGACCGTCTTTGGAGGTGAATTCAGACAAATTTTACTCAATA TGGGTGATAAAATGAGTGAGCCAGAAATCGATACTATGGTTTCACCCAGT GAAAATGCAGAAGGCTACATCCCTTACGAAACTCTCTTGGATTTCGTTAT GTCAAAATAAATTAATATCGACTTAACTAGATTAGAAATAACATCTGAAT TCTCATTCAAAAAGGGACAATTTCATAAACTTTCAAAGAACAAAAGGACT ACTCTTCTGgagttgaaattttttgtttaaagctattttattttcatcaa atttatgcaaaaatattgTAATTTTATTATACCAATATTATATTTTGTTG TAAGATAGGCCACTGATAAATTTGTGGAAAAGAAAACTAGAGCTGAGTTT CAACAGAGGCTAACAtctgttaaaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010957TCONS_00010957Clytia hemisphaericatranscript
TCONS_00010958TCONS_00010958Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010957-proteinTCONS_00010957-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:191781..199157 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TTC33PREDICTED: tetratricopeptide repeat protein 33 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.83 30.12 9.36 5.06 3.32 3.37 5.91 6.64 5.25 4.39 3.64 4.86 2.19 3.14 2.54 1.98 1485.17 1788.21 1.04 1.39 939.08 917.8 16.98 15.45 4.11 3.51 1.63 1.48 4.08 5.82