TCONS_00073003 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073003
Unique NameTCONS_00073003
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2643

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073003 ID=TCONS_00073003|Name=TCONS_00073003|organism=Clytia hemisphaerica|type=transcript|length=2643bp
CAAAAACAATCCACACAGAAAGAAAACAATCTTTTTTTTGGTTGGAGTGA
GCAGCAgtgacattttttgttttgtcaaaCTAAGGTAACTTTGGTGTTTA
TTCTGCAAATTTACGTCTTTTATATAAAGTATGGATCCTTTGAATTGCAT
TGAGCTAACATTAAAGACACCAAATCAAAGGATCAATGATATCCAACTAA
AGTGTAAAGAAGATTGGACCATCAAAAACTTAAAGGAACACTTGCAAGAT
GTTTATCCTTCAAAGCCGAAATGGAATTCACAAAAGCTAATTTATCTTGG
TAAATTGCTTCAAGACGATCATGCACTGATAAAAGAGGTCTTTTCTagcT
GTGCAAGAACATTCCATCTAGTTTGTCATGAAACACAAACTGCAGAATAT
ATTCCTTCACAAACACCCTCTCAGAGTCCAGTAAGTACAcccACCCAAAG
TTCTGACACTGCTACCTCCTCTTCCTCAATGCCCACAACGACAGATACCA
CTGATGGATTAAGGTTCAGAGGTACTCAGCAAGCACAACCAAGCTCTGAG
CAACACCAACCGTCTCCATCAATGTCACCATCAATGTCACCATCACCTTA
CAATTTTCCGATCAATATGCAACAATACCAACAGCTGAACCCACAACAGC
AATATCAATTACAAATGCAACAATATTACATGCAAATGCAGCAATGGCAA
TATGCAATGTCTACCGGACAATGGCCCTACCAACAAAATAGTCAGCCTGC
AACACCTTCTTCATTCACTGCTACTCCACCAGCCACACCGCTTTCTCCAC
AAGAGCAACCACAACCACAAGCTGCACAACCTGCACAACCAGAAGCCCCT
CAACCGGCACCACAGCAACGTCCACAAAATGTTCCCATGAATGCCGGCCC
AGGCGGTGCCATGATACAAGATGATAATGAAAATGGACAGAATCGTGATT
GGTTGGATGTGTTATACATGTCAATGAGAGGATTGATGTTATTGAGTATC
ATATATTTCTATTCTTCAACTAGTCGCTTCTTGCTGGTTACTATATTGGG
TTTCATTGTTTACATGTACCAAGCAGGATGGTTTACAATGAACAGACCGA
ACCCACCTCAGGAACAAGATGCAGCAGCACAGAATAATGTTGACCAACCA
GATGGAGAAGGACATcaaaacgaagaagaagaaggagaacaAGATGAACA
GAACAATACAGAACAAGATGAGAACAATACAGAGAACAATGAAACCAACG
AAACCATTGAACCTCCTTCTCCAAGTGTTTTTCGAATCTTTTGTACTTTC
ATTGTATCTTTTGTGACCTCACTCATTCCTGCTACTCCCCCACCACTTCA
GCAGAATTAAGCtcttcttttttcgttttttttttttttggaaagatatt
tttatataCTCGTAATATTTTGTAATATATAAGTTTTCGAAGTTAAGCAC
CTCAGATCATTTGATAAATTGTTGTTCGTAATGCTGTTATGAACAGAAAA
GAAAGAGAGTCACGTCTATTTCGACTAATACTTGAACATTTTTTCGCGAA
ATCTTTGGCGAAGCCGTTCGTGACTTTTTTTactgaaaaaaagtgaaaat
tacgAGATTGACAAAAATGTAACAGATTTTCAACTCACATGAGAAGCTTT
CCTTGTTTTCCTACCGTTGGtttataatttatttcaaaagattttatttt
actttttatatatgtttatctttttttacagTATAAAATAATTCTGCTGT
GAAAACTCTATTGACACGTGGTGCTTAGGGAAAGTGCTGTTTTTTTTCGT
AAAATATTCCAAAGGTTCATCAACAATATTTGCTTAACCCCTTCCGAATG
AGAGGAATCCCTAATAGAAAATAAAGGAATCcccaagaaaaaaaattcag
atcTGAGACTTTCTCACTGGAATTTTCATGTCTTTCAAAACTGTTACTAC
GTAAACCCTTGGGAAGGCAATAAGACTTTCTCAAGTTTGACCTCATGAAT
ATTTCTTGATGGATTTTTATATATGGTAGAATAAAGGAAAAAGGATTTAT
ATAAAATATCATATTATGCTAAAATAGTATCTTATTATACAATGTTATTA
TAAAGNTAAAGGAAAAAGGATTTATATAAAATATCATATTATGCTAAAAT
AGTATCTTATTATACAATATTATTATAAAGGTATAATGTTTTCAGTAAGC
GGACGATAGATTGGATATCTTAAAGGCATTAGACTTATGGTATTGGGGTT
GACCAAATGATAAAATGTTAGGTTTGAAATGTCAATCGaaattatttgaa
tttattttcaaacataATGTCATAGCTCTGATCTATTTTTGCTACACGAT
TCTTCATTTTTCCCACGATTGTTTCAAGAGTTTATTAAGTCTCTTAGAAA
CATACTAACActttaaataaatatttcttcCTAATATGGTTTGGTTTCTA
AGGTAACAACTGGTAGCCATAGCAACATACAGAATCGTATTTTGTATCAC
ATTACTCAGACCAAGGAGCTTGTTCAACCCTATACAATATGATAGATTTT
TCTCtgtgatttttctttgttgtaCATAGTATAAATAGTTGTTGTATCAT
TGTGatcctaaaaaaacaaaacataaaacacTTTTTCGGACAT
Run BLAST on NCBI

protein sequence of TCONS_00073003-protein

>TCONS_00073003-protein ID=TCONS_00073003-protein|Name=TCONS_00073003-protein|organism=Clytia hemisphaerica|type=polypeptide|length=409bp
MDPLNCIELTLKTPNQRINDIQLKCKEDWTIKNLKEHLQDVYPSKPKWNS
QKLIYLGKLLQDDHALIKEVFSSCARTFHLVCHETQTAEYIPSQTPSQSP
VSTPTQSSDTATSSSSMPTTTDTTDGLRFRGTQQAQPSSEQHQPSPSMSP
SMSPSPYNFPINMQQYQQLNPQQQYQLQMQQYYMQMQQWQYAMSTGQWPY
QQNSQPATPSSFTATPPATPLSPQEQPQPQAAQPAQPEAPQPAPQQRPQN
VPMNAGPGGAMIQDDNENGQNRDWLDVLYMSMRGLMLLSIIYFYSSTSRF
LLVTILGFIVYMYQAGWFTMNRPNPPQEQDAAAQNNVDQPDGEGHQNEEE
EGEQDEQNNTEQDENNTENNETNETIEPPSPSVFRIFCTFIVSFVTSLIP
ATPPPLQQN
Run BLAST on NCBI

transcript from alignment at scaffold_86:592720..600402-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073003 ID=TCONS_00073003|Name=TCONS_00073003|organism=Clytia hemisphaerica|type=transcript|length=7683bp|location=Sequence derived from alignment at scaffold_86:592720..600402- (Clytia hemisphaerica)
CAAAAACAATCCACACAGAAAGAAAACAATCTTTTTTTTGGTTGGAGTGA GCAGCAGTGACATTTTTTGTTTTGTCAAACTAAGGTAACTTTGGTGTTTA TTCTGCAAATTTACGTCTTTTATATAAAGTATGGATCCTTTGAATTGCAT TGAGCTAACATTAAAGACACCAAATCAAAGGATCAATGATATCCAACTAA AGTGTAAAGAAGATTGGACCATCAAAAACTTAAAGGAACACTTGCAAGAT GTTTATCCTTCAAAGCCGGTATGTGTTAAAATTTCCTCTTTCCCCTGTTA GCTTTTGATGATTTTAAATCTTCTTAGAGAGTTCTAAAGAAAGATGTGCA TACAATTAGACCTCATTCACCCTTCCATGTTCTTCCTGGCTGTTTTTTCA GTACAAAATGCAGTTTTTATAGCTATCTCTTGTGACTTGTGTGTAATGTA AAAAATACTGTCAACTGCTCCAACTTGCCTTGGGACTACCTGACAAAACA TGGGACGGCAATTTGGCCAGGCAAAACGATGAAGCATTCATCATGTCACT TGCGCGGCAAGTTCAAGAGCAGCCACCGGCAGATTTATTTGAAATATCTG CTCTTTTTTTCTAGGAGTAAATTTTATGGATAAATCTAGGAAAGACTTTC CTCAAAACGCCCAGGTAAAATCCAGGGGTCGCCTTAAAGACATCTGTTCT TAAAATTCAGGAGCATGTTTTAAAGAAAAGCACATGCAATTTTGCAGCGG AAAATCCAGGAGCTAAAATTGTGAAAAACACAACCCAGATGCCAGATTTT TTTTTCCAAGGAGCTTCATAATTTTCATAAAAGGTCTCACTTTCTAGGAG CATTTTAACTTTCTTAGAAAATAGCTGTTATATATTTTTGCAAGTTACAC ACTCGTTATTAGTTAATCCCATTGGGCGCTAGGCGGTTAGGCAGCGGGCG TTCTCTAATTCTCCAATCTGCGTCCGGTCATTTTGAATGAAAACAAAAAA GTTAAAAAGGGCGCGCTATCAGTGAAAGTTATTGTGACATGTTATGACAG AAAGTATGATTGATAAACTTGGAAGAGTTATCAAAACAAATTTGTTGTCA AAGAGATTTAACAGTAAGTGAAAATACAGGCTAGATATCAACAGTCCCAT GTTTCGACCAATCATCCCAAGTTAGAACAGTTGACGGTAGGAGTTTAAGC TTAAATTGACTTATGGTTTTTGATGCTACAATCTTTTAAACTCCAGAAAA GTCTAGTTCTACTTTGCAATCTTTCTGAATAAAGTGCGCATGCACTGAAA TTTAAAATCAGTTGGGAAAATACACGTTTTTTATGAGCCTTAACTTGGCT CCGAGCCTGGAGTTCTTTATTTTTCAAGAATGTTTCAGCCTCAAAGTTCC TTACTTACTAAGCTGCTAGTTTCGAATTTTTCAGTTGTAAATTTTTTCTG AGGCTGAAATCTGCCTCACAGGTCAATACCCGTCCTGTTTAAAATCAGAT TATAAAAATACAGGACAAGTCTGCTGTCTAGAGCAGTTCCTTAACAATTC CTTATTTTTCGGGCCATTTTCAGCCTAAAGTTCCTTATAAACATGTTCCT TATAAAGAAACGTTTAGGTATCTTTAATCCCCCACCCAAATTGTTTCTGC CTTAACTGCGTTCACTTTCTATTGCAAAACTTAGTCATGGGCACATGATT GACTTCTAGGCTTGAAAGCAAACCTGGATGAAATGAACTGACCAACAACA GTGCCTTGTTTTTATTCTGTTTAAATTAAAGGCTGCTACACACTCAGCAT TTTATGGTCGGCGAACAAGATACACGGCTCAGGCGCTTTGGTCGCTGTAC GCTTTTCTCATTCCACTCTGCAGCACATGTTTTTCTCTCTTCTTTTGTTT ATCATCTTTTTGCACATGATACACATCTTTTGCACACGAGACAAGAAAAA AATCTCTCTTCTGATTGGTTGATTTGATAAAAACAAAGGGTGTGCTGTTC AGCTTCGCGAAAAAAGTTAAAAGTTTCAACTCTTGTTGCGCTCAAAGCAA ACGCCTTTGAAGGCTTGAATTATGTAATTTATTCAATAATTAAGCCGTGC ACCTTGTTCGACGACCATAAAATGCTGAGTGGGTAGCAGCCTTTAATTTA AACAGAATAAAAACAAGGCACTGTTGTTGGTCAGTTCATTTCATCCAGGT TTGCTTTCAAGCCTAGAAGTCAATCATGTGCCCATGACTAAGTTTTGCAA TAGAAAGTGAACGCAGTTAAGGCAGAAACAATTTGGGTGGGGGATTAAAG ATACCTAAACGTTTCTTTATAAGGAACATGTTTATAAGGAACTTTAGGCT GAAAATGGCCCGAAAAATAAGGAATTGTTAAGGAACTGCTCTAGACAGCA GACTTGTCCTGTATTTTTATAATCTGATTTTAAACAGGACGGGTATTGAC CTGTGAGGCAGATTTCAGCCTCAGAAAAAATTTACAACTGAAAAATTCGA AACTAGCAGCTTAGTAAGTAAGGAACTTTGAGGCTGAAACATTCTTGAAA AATAAAGAACTCCAGGCTCGGAGCCAAGTTAAGGCTCATAAAAAACGTGT ATTTTCCCAACTGATTTTAAATTTCAGTGCATGCGCACTTTATTCAGAAA GATTGCAAAGTAGAACTAGACTTTTCTGGAGTTTAAAAGATTGTAGCATC AAAAACCATAAGTCAATTTAANAATCATACTTTCTGTCATAACATGTCAC AATAACTTTCACTGATAGCGCGCCCTTTTTAACTTTTTTGTTTTCATTCA AAATGACCGGACGCAGATTGGAGAACTAGAGAACGCCCGCTGCCTAACCG CCTAGCGCCCAATGGGATTAACTAATAACGAGTGTGTAACTTGCTGGGCG AGTGGCGTCAAACGCTCCATCGTTTTGCCACTAATTTGGTCTTCTTCGTT CCAGACATTCGCGTGTTTTCCACTTCGAATTTTTTTCTTCATATTTTTGA TTAAATCTCTAAAAAAGGGTGTCATAATTAGATGAAGGATCCTAACATTA GATGGTTCTAATCAACTGGTTCATTTTTACACCTCATCTAATGAAAATGG AATTAAAACATTACAGTAGTTTTGAAAGTTTGTGTGGTTGTAAGCTATTG TGGTAAATTAGCTCCCCTTTACTTTTGCAATGTAAAAATTGAAAGAAATG ACCTTTTATTGAAAATTAACCGTCTCAATTGTTCTGGTTTATTGATCAAT CATACAAAAGCAGATTAGTCCTATGGGGGTCTCCTTTTCATCGTTCCAAA TAGTTTTAGTTTGATGCTTCGCCAGTGTGAAATAACATTTTGAATGTTTT GATGTTTTAGAATCCCATTGACAAACCTTTATGGAAAGTCCTTATAGACG ATTTTTCTTAACCAACAGTTGCATGGTATTATTAATAAACTGTTTTTTCT TTATAGAAATGGAATTCACAAAAGCTAATTTATCTTGGTAAATTGCTTCA AGACGATCATGCACTGATAAAAGAGGTCTTTTCTGTAAGTATTATTAATG AAGTATATAATTTTACTAGTTTTTATTAGGGAAATGGAAAAATGGAGACT CGATAGCTATTAATATATATGTAGCCCTATTCTTCTTAATATTTAATTCT CCTATTACAGTATATAAATGTTAAGATGAATGTAGCAAATGATTATAGTT GTTTTAGAGAAAGTGACGGACTATTGAATAACTAATTACTCCACAACAGT TACCTAGAGACAAGATCATTTATCACTTTTTATTGGCTGAGGGAAAGTAA TGTATGTGAAGTAATTTGTTATTCAATAGGCCGTCGCGTTCTCCAAAATA ACTATTGTAGAGCCCTAATCCTAGATTCATTTCCCAAACTTTGTAAAACC CCATCAGTTATTAAGCCTATTACTTTGAGTTAATACCTCATTCTTTTAAA TGTCGCCTCAAATAAATGACCTTCTTTTATAGAAAACTTTGGAAACTGCC CTCAAATAAACACGCCTCTTCTTTTTATGTATTGGAACTGATTTTTGCCT GTTGCTACATCCCTAAAATGGCATATTTCTATTGAAGTTACCTTATAGTT CTAAACTATTAACTTAACCCCCCTCTTTTAACCATCTAAGAAACACTGTG GTATTTATTTGAAGTAACACGGTATTAGCTTCGTCGTATATATGAATTTT TATTTTTTTAGAGCTGTGCAAGAACATTCCATCTAGTTTGTCATGAAACA CAAACTGCAGAATATATTCCTTCACAAACACCCTCTCAGAGTCCAGTAAG TACAGTAAGTTTGTCCTATTACTTTTCCATGTTTGACCTCAATAGAAAAT CAAATCTTAATTTAATGGCCGCTCTCTTATACAAAGCTTGAAAATTATGC ACAGTGTTTGAAAAATATTGTCGATGCATAGTCAGAAGAGAATTGCATTA ATGTCTTGATTTCAGGCTTTTAGAAAGATCAATAACGACTTCCTCTGTAG TTTGAGTCATATACTTGACTGTACTTGATTACCACATAATATTTTGCCAG AGATCTCTAAATAAAATTCAACAAAATCGATAAACATAAATTGGTCAAAC AGGGTTACAGTGTGGAATACAATCAAATCAAAAATGTATTTTTATTTTTC AGCCCACCCAAAGTTCTGACACTGCTACCTCCTCTTCCTCAATGCCCACA ACGACAGATACCACTGATGGATTAAGGTTCAGAGGTACTCAGCAAGCACA ACCAAGGTCAGTCAATTTTGTTATTACTTGAAAGAAGATTGTCATTAACT TTTAGATTAGTCCTGCTCCTGTAAAACTGAAAATGCAAGCTAGTTCATAA ATTGTATTCAAATCAAAAGCTATGAATGTCAGTGAACTCTGTATATTATT TAACCTCGATAGAAGCACTTGTGTATTCCATTACTACAAAATCATTCTCA ACAGAGAGAGATGCTCTCAAACTTGAATGTCACTTTCAACCAAAAAGTGT AGTACCAAACATAGTACATATTTCTTTTACAAAATAATTCTCGAGCACGA ATTTCACTTTAAACTTGAAAGAGTGGCAATGAGCAATTGTTTTTTATTTC TTTAAAACTTCCTAGCTCTGAGCAACACCAACCGTCTCCATCAATGTCAC CATCAATGTCACCATCACCTTACAATTTTCCGATCAATATGCAACAATAC CAACAGCTGAACCCACAACAGCAATATCAATTACAAATGCAACAATATTA CATGCAAATGCAGCAATGGCAATATGCAATGTCTACCGGACAATGGCCCT ACCAACAAAAGTAAAACTCCTTTTAACAAATGAATTTTGCATAGCATCTC TCAAACTAAATTCTCTCTTTCTCCATTTTCCTGAAGTCTTAAACAAGAGG TCGATTTTGTGCTTTTCTCTTAATATGTTAAAAAAAAATTTGTTAGAAAC TTTTATTCCTTTTCAGTAGTCAGCCTGCAACACCTTCTTCATTCACTGCT ACTCCACCAGCCACACCGCTTTCTCCACAAGAGCAACCACAACCACAAGC TGCACAACCTGCACAACCAGAAGCCCCTCAACCGGCACCACAGCAACGTC CACAAAATGTTCCCATGAATGCCGGCCCAGGCGGTGCCATGATACAAGAT GATAATGAAAATGGACAGAATCGTGATTGGTTGGATGTGTTATACATGTC AATGAGAGGATTGATGTTATTGAGTATCATATATTTCTATTCTTCAACTA GTCGCTTCTTGCTGGTTACTATATTGGGTTTCATTGTTTACATGTACCAA GCAGGATGGTTTACAATGAACAGACCGAACCCACCTCAGGAACAAGGTTT GTTGGTAGTTTTTTTATCAAACTTCATGTTTTTGCTAAGTAATTATAAAC TTTCCTCTATCGGGGAGTGTTTTGGAATTTTTGAAGCTAGTTGGGATATG TATATGTTGATAGGGGTTGAAATTTCCCATGTAATCACGGAATATATATT GTAAAAGTTTTTTTTTTTTTTCTAAAAATTTTTGACCTGACCCGATATTT ACTTGGAATGATCTTGAATACTTTACAGTTTTTCTGTCGGCTTTCTTAGG TCTCTTCAAACAGCTTACTTATATTATTATTAACATATCAATACTCCTAT TTTTCCAGATGCAGCAGCACAGAATAATGTTGACCAACCAGATGGAGAAG GACATCAAAACGAAGAAGAAGAAGGAGAACAAGATGAACAGAACAATACA GAACAAGATGAGAACAATACAGAGAACAATGAAACCAACGAAACCATTGA ACCTCCTTCTCCAAGTGTTTTTCGAATCTTTTGTACTTTCATTGTATCTT TTGTGACCTCACTCATTCCTGCTACTCCCCCACCACTTCAGCAGAATTAA GCTCTTCTTTTTTCGTTTTTTTTTTTTTTGGAAAGATATTTTTATATACT CGTAATATTTTGTAATATATAAGTTTTCGAAGTTAAGCACCTCAGATCAT TTGATAAATTGTTGTTCGTAATGCTGTTATGAACAGAAAAGAAAGAGAGT CACGTCTATTTCGACTAATACTTGAACATTTTTTCGCGAAATCTTTGGCG AAGCCGTTCGTGACTTTTTTTACTGAAAAAAAGTGAAAATTACGAGATTG ACAAAAATGTAACAGATTTTCAACTCACATGAGAAGCTTTCCTTGTTTTC CTACCGTTGGTTTATAATTTATTTCAAAAGATTTTATTTTACTTTTTATA TATGTTTATCTTTTTTTACAGTATAAAATAATTCTGCTGTGAAAACTCTA TTGACACGTGGTGCTTAGGGAAAGTGCTGTTTTTTTTCGTAAAATATTCC AAAGGTTCATCAACAATATTTGCTTAACCCCTTCCGAATGAGAGGAATCC CTAATAGAAAATAAAGGAATCCCCAAGAAAAAAAATTCAGATCTGAGACT TTCTCACTGGAATTTTCATGTCTTTCAAAACTGTTACTACGTAAACCCTT GGGAAGGCAATAAGACTTTCTCAAGTTTGACCTCATGAATATTTCTTGAT GGATTTTTATATATGGTAGAATAAAGGAAAAAGGATTTATATAAAATATC ATATTATGCTAAAATAGTATCTTATTATACAATGTTATTATAAAGNTAAA GGAAAAAGGATTTATATAAAATATCATATTATGCTAAAATAGTATCTTAT TATACAATATTATTATAAAGGTATAATGTTTTCAGTAAGCGGACGATAGA TTGGATATCTTAAAGGCATTAGACTTATGGTATTGGGGTTGACCAAATGA TAAAATGTTAGGTTTGAAATGTCAATCGAAATTATTTGAATTTATTTTCA AACATAATGTCATAGCTCTGATCTATTTTTGCTACACGATTCTTCATTTT TCCCACGATTGTTTCAAGAGTTTATTAAGTCTCTTAGAAACATACTAACA CTTTAAATAAATATTTCTTCCTAATATGGTTTGGTTTCTAAGGTAACAAC TGGTAGCCATAGCAACATACAGAATCGTATTTTGTATCACATTACTCAGA CCAAGGAGCTTGTTCAACCCTATACAATATGATAGATTTTTCTCTGTGAT TTTTCTTTGTTGTACATAGTATAAATAGTTGTTGTATCATTGTGATCCTA AAAAAACAAAACATAAAACACTTTTTCGGACAT

Coding sequence (CDS) from alignment at scaffold_86:592720..600402-

>TCONS_00073003 ID=TCONS_00073003|Name=TCONS_00073003|organism=Clytia hemisphaerica|type=CDS|length=8610bp|location=Sequence derived from alignment at scaffold_86:592720..600402- (Clytia hemisphaerica)
ATGCAGCAGCACAGAATAATGTTGACCAACCAGATGGAGAAGGACATCAA
AACGAAGAAGAAGAAGGAGAACAAGATGAACAGAACAATACAGAACAAGA
TGAGAACAATACAGAGAACAATGAAACCAACGAAACCATTGAACCTCCTT
CTCCAAGTGTTTTTCGAATCTTTTGTACTTTCATTGTATCTTTTGTGACC
TCACTCATTCCTGCTACTCCCCCACCACTTCAGCAGAATTAATAGTCAGC
CTGCAACACCTTCTTCATTCACTGCTACTCCACCAGCCACACCGCTTTCT
CCACAAGAGCAACCACAACCACAAGCTGCACAACCTGCACAACCAGAAGC
CCCTCAACCGGCACCACAGCAACGTCCACAAAATGTTCCCATGAATGCCG
GCCCAGGCGGTGCCATGATACAAGATGATAATGAAAATGGACAGAATCGT
GATTGGTTGGATGTGTTATACATGTCAATGAGAGGATTGATGTTATTGAG
TATCATATATTTCTATTCTTCAACTAGTCGCTTCTTGCTGGTTACTATAT
TGGGTTTCATTGTTTACATGTACCAAGCAGGATGGTTTACAATGAACAGA
CCGAACCCACCTCAGGAACAAGCTCTGAGCAACACCAACCGTCTCCATCA
ATGTCACCATCAATGTCACCATCACCTTACAATTTTCCGATCAATATGCA
ACAATACCAACAGCTGAACCCACAACAGCAATATCAATTACAAATGCAAC
AATATTACATGCAAATGCAGCAATGGCAATATGCAATGTCTACCGGACAA
TGGCCCTACCAACAAAACCCACCCAAAGTTCTGACACTGCTACCTCCTCT
TCCTCAATGCCCACAACGACAGATACCACTGATGGATTAAGGTTCAGAGG
TACTCAGCAAGCACAACCAAGAGCTGTGCAAGAACATTCCATCTAGTTTG
TCATGAAACACAAACTGCAGAATATATTCCTTCACAAACACCCTCTCAGA
GTCCAGTAAGTACAAAATGGAATTCACAAAAGCTAATTTATCTTGGTAAA
TTGCTTCAAGACGATCATGCACTGATAAAAGAGGTCTTTTCTATGGATCC
TTTGAATTGCATTGAGCTAACATTAAAGACACCAAATCAAAGGATCAATG
ATATCCAACTAAAGTGTAAAGAAGATTGGACCATCAAAAACTTAAAGGAA
CACTTGCAAGATGTTTATCCTTCAAAGCCGATGCAGCAGCACAGAATAAT
GTTGACCAACCAGATGGAGAAGGACATCAAAACGAAGAAGAAGAAGGAGA
ACAAGATGAACAGAACAATACAGAACAAGATGAGAACAATACAGAGAACA
ATGAAACCAACGAAACCATTGAACCTCCTTCTCCAAGTGTTTTTCGAATC
TTTTGTACTTTCATTGTATCTTTTGTGACCTCACTCATTCCTGCTACTCC
CCCACCACTTCAGCAGAATTAATAGTCAGCCTGCAACACCTTCTTCATTC
ACTGCTACTCCACCAGCCACACCGCTTTCTCCACAAGAGCAACCACAACC
ACAAGCTGCACAACCTGCACAACCAGAAGCCCCTCAACCGGCACCACAGC
AACGTCCACAAAATGTTCCCATGAATGCCGGCCCAGGCGGTGCCATGATA
CAAGATGATAATGAAAATGGACAGAATCGTGATTGGTTGGATGTGTTATA
CATGTCAATGAGAGGATTGATGTTATTGAGTATCATATATTTCTATTCTT
CAACTAGTCGCTTCTTGCTGGTTACTATATTGGGTTTCATTGTTTACATG
TACCAAGCAGGATGGTTTACAATGAACAGACCGAACCCACCTCAGGAACA
AGCTCTGAGCAACACCAACCGTCTCCATCAATGTCACCATCAATGTCACC
ATCACCTTACAATTTTCCGATCAATATGCAACAATACCAACAGCTGAACC
CACAACAGCAATATCAATTACAAATGCAACAATATTACATGCAAATGCAG
CAATGGCAATATGCAATGTCTACCGGACAATGGCCCTACCAACAAAACCC
ACCCAAAGTTCTGACACTGCTACCTCCTCTTCCTCAATGCCCACAACGAC
AGATACCACTGATGGATTAAGGTTCAGAGGTACTCAGCAAGCACAACCAA
GAGCTGTGCAAGAACATTCCATCTAGTTTGTCATGAAACACAAACTGCAG
AATATATTCCTTCACAAACACCCTCTCAGAGTCCAGTAAGTACAAAATGG
AATTCACAAAAGCTAATTTATCTTGGTAAATTGCTTCAAGACGATCATGC
ACTGATAAAAGAGGTCTTTTCTATGGATCCTTTGAATTGCATTGAGCTAA
CATTAAAGACACCAAATCAAAGGATCAATGATATCCAACTAAAGTGTAAA
GAAGATTGGACCATCAAAAACTTAAAGGAACACTTGCAAGATGTTTATCC
TTCAAAGCCGATGCAGCAGCACAGAATAATGTTGACCAACCAGATGGAGA
AGGACATCAAAACGAAGAAGAAGAAGGAGAACAAGATGAACAGAACAATA
CAGAACAAGATGAGAACAATACAGAGAACAATGAAACCAACGAAACCATT
GAACCTCCTTCTCCAAGTGTTTTTCGAATCTTTTGTACTTTCATTGTATC
TTTTGTGACCTCACTCATTCCTGCTACTCCCCCACCACTTCAGCAGAATT
AATAGTCAGCCTGCAACACCTTCTTCATTCACTGCTACTCCACCAGCCAC
ACCGCTTTCTCCACAAGAGCAACCACAACCACAAGCTGCACAACCTGCAC
AACCAGAAGCCCCTCAACCGGCACCACAGCAACGTCCACAAAATGTTCCC
ATGAATGCCGGCCCAGGCGGTGCCATGATACAAGATGATAATGAAAATGG
ACAGAATCGTGATTGGTTGGATGTGTTATACATGTCAATGAGAGGATTGA
TGTTATTGAGTATCATATATTTCTATTCTTCAACTAGTCGCTTCTTGCTG
GTTACTATATTGGGTTTCATTGTTTACATGTACCAAGCAGGATGGTTTAC
AATGAACAGACCGAACCCACCTCAGGAACAAGCTCTGAGCAACACCAACC
GTCTCCATCAATGTCACCATCAATGTCACCATCACCTTACAATTTTCCGA
TCAATATGCAACAATACCAACAGCTGAACCCACAACAGCAATATCAATTA
CAAATGCAACAATATTACATGCAAATGCAGCAATGGCAATATGCAATGTC
TACCGGACAATGGCCCTACCAACAAAACCCACCCAAAGTTCTGACACTGC
TACCTCCTCTTCCTCAATGCCCACAACGACAGATACCACTGATGGATTAA
GGTTCAGAGGTACTCAGCAAGCACAACCAAGAGCTGTGCAAGAACATTCC
ATCTAGTTTGTCATGAAACACAAACTGCAGAATATATTCCTTCACAAACA
CCCTCTCAGAGTCCAGTAAGTACAAAATGGAATTCACAAAAGCTAATTTA
TCTTGGTAAATTGCTTCAAGACGATCATGCACTGATAAAAGAGGTCTTTT
CTATGGATCCTTTGAATTGCATTGAGCTAACATTAAAGACACCAAATCAA
AGGATCAATGATATCCAACTAAAGTGTAAAGAAGATTGGACCATCAAAAA
CTTAAAGGAACACTTGCAAGATGTTTATCCTTCAAAGCCGATGCAGCAGC
ACAGAATAATGTTGACCAACCAGATGGAGAAGGACATCAAAACGAAGAAG
AAGAAGGAGAACAAGATGAACAGAACAATACAGAACAAGATGAGAACAAT
ACAGAGAACAATGAAACCAACGAAACCATTGAACCTCCTTCTCCAAGTGT
TTTTCGAATCTTTTGTACTTTCATTGTATCTTTTGTGACCTCACTCATTC
CTGCTACTCCCCCACCACTTCAGCAGAATTAATAGTCAGCCTGCAACACC
TTCTTCATTCACTGCTACTCCACCAGCCACACCGCTTTCTCCACAAGAGC
AACCACAACCACAAGCTGCACAACCTGCACAACCAGAAGCCCCTCAACCG
GCACCACAGCAACGTCCACAAAATGTTCCCATGAATGCCGGCCCAGGCGG
TGCCATGATACAAGATGATAATGAAAATGGACAGAATCGTGATTGGTTGG
ATGTGTTATACATGTCAATGAGAGGATTGATGTTATTGAGTATCATATAT
TTCTATTCTTCAACTAGTCGCTTCTTGCTGGTTACTATATTGGGTTTCAT
TGTTTACATGTACCAAGCAGGATGGTTTACAATGAACAGACCGAACCCAC
CTCAGGAACAAGCTCTGAGCAACACCAACCGTCTCCATCAATGTCACCAT
CAATGTCACCATCACCTTACAATTTTCCGATCAATATGCAACAATACCAA
CAGCTGAACCCACAACAGCAATATCAATTACAAATGCAACAATATTACAT
GCAAATGCAGCAATGGCAATATGCAATGTCTACCGGACAATGGCCCTACC
AACAAAACCCACCCAAAGTTCTGACACTGCTACCTCCTCTTCCTCAATGC
CCACAACGACAGATACCACTGATGGATTAAGGTTCAGAGGTACTCAGCAA
GCACAACCAAGAGCTGTGCAAGAACATTCCATCTAGTTTGTCATGAAACA
CAAACTGCAGAATATATTCCTTCACAAACACCCTCTCAGAGTCCAGTAAG
TACAAAATGGAATTCACAAAAGCTAATTTATCTTGGTAAATTGCTTCAAG
ACGATCATGCACTGATAAAAGAGGTCTTTTCTATGGATCCTTTGAATTGC
ATTGAGCTAACATTAAAGACACCAAATCAAAGGATCAATGATATCCAACT
AAAGTGTAAAGAAGATTGGACCATCAAAAACTTAAAGGAACACTTGCAAG
ATGTTTATCCTTCAAAGCCGATGCAGCAGCACAGAATAATGTTGACCAAC
CAGATGGAGAAGGACATCAAAACGAAGAAGAAGAAGGAGAACAAGATGAA
CAGAACAATACAGAACAAGATGAGAACAATACAGAGAACAATGAAACCAA
CGAAACCATTGAACCTCCTTCTCCAAGTGTTTTTCGAATCTTTTGTACTT
TCATTGTATCTTTTGTGACCTCACTCATTCCTGCTACTCCCCCACCACTT
CAGCAGAATTAATAGTCAGCCTGCAACACCTTCTTCATTCACTGCTACTC
CACCAGCCACACCGCTTTCTCCACAAGAGCAACCACAACCACAAGCTGCA
CAACCTGCACAACCAGAAGCCCCTCAACCGGCACCACAGCAACGTCCACA
AAATGTTCCCATGAATGCCGGCCCAGGCGGTGCCATGATACAAGATGATA
ATGAAAATGGACAGAATCGTGATTGGTTGGATGTGTTATACATGTCAATG
AGAGGATTGATGTTATTGAGTATCATATATTTCTATTCTTCAACTAGTCG
CTTCTTGCTGGTTACTATATTGGGTTTCATTGTTTACATGTACCAAGCAG
GATGGTTTACAATGAACAGACCGAACCCACCTCAGGAACAAGCTCTGAGC
AACACCAACCGTCTCCATCAATGTCACCATCAATGTCACCATCACCTTAC
AATTTTCCGATCAATATGCAACAATACCAACAGCTGAACCCACAACAGCA
ATATCAATTACAAATGCAACAATATTACATGCAAATGCAGCAATGGCAAT
ATGCAATGTCTACCGGACAATGGCCCTACCAACAAAACCCACCCAAAGTT
CTGACACTGCTACCTCCTCTTCCTCAATGCCCACAACGACAGATACCACT
GATGGATTAAGGTTCAGAGGTACTCAGCAAGCACAACCAAGAGCTGTGCA
AGAACATTCCATCTAGTTTGTCATGAAACACAAACTGCAGAATATATTCC
TTCACAAACACCCTCTCAGAGTCCAGTAAGTACAAAATGGAATTCACAAA
AGCTAATTTATCTTGGTAAATTGCTTCAAGACGATCATGCACTGATAAAA
GAGGTCTTTTCTATGGATCCTTTGAATTGCATTGAGCTAACATTAAAGAC
ACCAAATCAAAGGATCAATGATATCCAACTAAAGTGTAAAGAAGATTGGA
CCATCAAAAACTTAAAGGAACACTTGCAAGATGTTTATCCTTCAAAGCCG
ATGCAGCAGCACAGAATAATGTTGACCAACCAGATGGAGAAGGACATCAA
AACGAAGAAGAAGAAGGAGAACAAGATGAACAGAACAATACAGAACAAGA
TGAGAACAATACAGAGAACAATGAAACCAACGAAACCATTGAACCTCCTT
CTCCAAGTGTTTTTCGAATCTTTTGTACTTTCATTGTATCTTTTGTGACC
TCACTCATTCCTGCTACTCCCCCACCACTTCAGCAGAATTAATAGTCAGC
CTGCAACACCTTCTTCATTCACTGCTACTCCACCAGCCACACCGCTTTCT
CCACAAGAGCAACCACAACCACAAGCTGCACAACCTGCACAACCAGAAGC
CCCTCAACCGGCACCACAGCAACGTCCACAAAATGTTCCCATGAATGCCG
GCCCAGGCGGTGCCATGATACAAGATGATAATGAAAATGGACAGAATCGT
GATTGGTTGGATGTGTTATACATGTCAATGAGAGGATTGATGTTATTGAG
TATCATATATTTCTATTCTTCAACTAGTCGCTTCTTGCTGGTTACTATAT
TGGGTTTCATTGTTTACATGTACCAAGCAGGATGGTTTACAATGAACAGA
CCGAACCCACCTCAGGAACAAGCTCTGAGCAACACCAACCGTCTCCATCA
ATGTCACCATCAATGTCACCATCACCTTACAATTTTCCGATCAATATGCA
ACAATACCAACAGCTGAACCCACAACAGCAATATCAATTACAAATGCAAC
AATATTACATGCAAATGCAGCAATGGCAATATGCAATGTCTACCGGACAA
TGGCCCTACCAACAAAACCCACCCAAAGTTCTGACACTGCTACCTCCTCT
TCCTCAATGCCCACAACGACAGATACCACTGATGGATTAAGGTTCAGAGG
TACTCAGCAAGCACAACCAAGAGCTGTGCAAGAACATTCCATCTAGTTTG
TCATGAAACACAAACTGCAGAATATATTCCTTCACAAACACCCTCTCAGA
GTCCAGTAAGTACAAAATGGAATTCACAAAAGCTAATTTATCTTGGTAAA
TTGCTTCAAGACGATCATGCACTGATAAAAGAGGTCTTTTCTATGGATCC
TTTGAATTGCATTGAGCTAACATTAAAGACACCAAATCAAAGGATCAATG
ATATCCAACTAAAGTGTAAAGAAGATTGGACCATCAAAAACTTAAAGGAA
CACTTGCAAGATGTTTATCCTTCAAAGCCGATGCAGCAGCACAGAATAAT
GTTGACCAACCAGATGGAGAAGGACATCAAAACGAAGAAGAAGAAGGAGA
ACAAGATGAACAGAACAATACAGAACAAGATGAGAACAATACAGAGAACA
ATGAAACCAACGAAACCATTGAACCTCCTTCTCCAAGTGTTTTTCGAATC
TTTTGTACTTTCATTGTATCTTTTGTGACCTCACTCATTCCTGCTACTCC
CCCACCACTTCAGCAGAATTAATAGTCAGCCTGCAACACCTTCTTCATTC
ACTGCTACTCCACCAGCCACACCGCTTTCTCCACAAGAGCAACCACAACC
ACAAGCTGCACAACCTGCACAACCAGAAGCCCCTCAACCGGCACCACAGC
AACGTCCACAAAATGTTCCCATGAATGCCGGCCCAGGCGGTGCCATGATA
CAAGATGATAATGAAAATGGACAGAATCGTGATTGGTTGGATGTGTTATA
CATGTCAATGAGAGGATTGATGTTATTGAGTATCATATATTTCTATTCTT
CAACTAGTCGCTTCTTGCTGGTTACTATATTGGGTTTCATTGTTTACATG
TACCAAGCAGGATGGTTTACAATGAACAGACCGAACCCACCTCAGGAACA
AGCTCTGAGCAACACCAACCGTCTCCATCAATGTCACCATCAATGTCACC
ATCACCTTACAATTTTCCGATCAATATGCAACAATACCAACAGCTGAACC
CACAACAGCAATATCAATTACAAATGCAACAATATTACATGCAAATGCAG
CAATGGCAATATGCAATGTCTACCGGACAATGGCCCTACCAACAAAACCC
ACCCAAAGTTCTGACACTGCTACCTCCTCTTCCTCAATGCCCACAACGAC
AGATACCACTGATGGATTAAGGTTCAGAGGTACTCAGCAAGCACAACCAA
GAGCTGTGCAAGAACATTCCATCTAGTTTGTCATGAAACACAAACTGCAG
AATATATTCCTTCACAAACACCCTCTCAGAGTCCAGTAAGTACAAAATGG
AATTCACAAAAGCTAATTTATCTTGGTAAATTGCTTCAAGACGATCATGC
ACTGATAAAAGAGGTCTTTTCTATGGATCCTTTGAATTGCATTGAGCTAA
CATTAAAGACACCAAATCAAAGGATCAATGATATCCAACTAAAGTGTAAA
GAAGATTGGACCATCAAAAACTTAAAGGAACACTTGCAAGATGTTTATCC
TTCAAAGCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045280XLOC_045280Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073003-proteinTCONS_00073003-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073003-exon-scaffold_86-1575043694:600135..600402TCONS_00073003-exon-scaffold_86-1575043694:600135..600402Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1575043694:596869..596946TCONS_00073003-exon-scaffold_86-1575043694:596869..596946Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1575043694:596099..596191TCONS_00073003-exon-scaffold_86-1575043694:596099..596191Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1575043694:595647..595750TCONS_00073003-exon-scaffold_86-1575043694:595647..595750Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1575043694:595093..595287TCONS_00073003-exon-scaffold_86-1575043694:595093..595287Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1575043694:594557..594936TCONS_00073003-exon-scaffold_86-1575043694:594557..594936Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1575043694:592720..594244TCONS_00073003-exon-scaffold_86-1575043694:592720..594244Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1510915933:600135..600402TCONS_00073003-exon-scaffold_86-1510915933:600135..600402Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1510915933:596869..596946TCONS_00073003-exon-scaffold_86-1510915933:596869..596946Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1510915933:596099..596191TCONS_00073003-exon-scaffold_86-1510915933:596099..596191Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1510915933:595647..595750TCONS_00073003-exon-scaffold_86-1510915933:595647..595750Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1510915933:595093..595287TCONS_00073003-exon-scaffold_86-1510915933:595093..595287Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1510915933:594557..594936TCONS_00073003-exon-scaffold_86-1510915933:594557..594936Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1510915933:592720..594244TCONS_00073003-exon-scaffold_86-1510915933:592720..594244Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1491911889:600135..600402TCONS_00073003-exon-scaffold_86-1491911889:600135..600402Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1491911889:596869..596946TCONS_00073003-exon-scaffold_86-1491911889:596869..596946Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1491911889:596099..596191TCONS_00073003-exon-scaffold_86-1491911889:596099..596191Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1491911889:595647..595750TCONS_00073003-exon-scaffold_86-1491911889:595647..595750Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1491911889:595093..595287TCONS_00073003-exon-scaffold_86-1491911889:595093..595287Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1491911889:594557..594936TCONS_00073003-exon-scaffold_86-1491911889:594557..594936Clytia hemisphaericaexon
TCONS_00073003-exon-scaffold_86-1491911889:592720..594244TCONS_00073003-exon-scaffold_86-1491911889:592720..594244Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:592720..600402 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0631163 0.0694268 0.0151126 0.0154578 5.41108 12.7267 3.7878 4.68181 3.68286 7.80992 14.0185 3.54982 25.4705 12.0562 0.0958722 0.112543 0.157095 0.122488 0.493543 0.286338 0.24824 0.334653 0.142922 0.134952 53.524 47.2256 0.231043 0.28333 0.131054 0.231888
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073003 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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