XLOC_045280 (gene) - C. hemisphaerica

Overview
NameXLOC_045280
Unique NameXLOC_045280
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:592720..600402-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045280 ID=XLOC_045280|Name=XLOC_045280|organism=Clytia hemisphaerica|type=gene|length=7683bp|location=Sequence derived from alignment at scaffold_86:592720..600402- (Clytia hemisphaerica)
CAAAAACAATCCACACAGAAAGAAAACAATCTTTTTTTTGGTTGGAGTGA GCAGCAGTGACATTTTTTGTTTTGTCAAACTAAGGTAACTTTGGTGTTTA TTCTGCAAATTTACGTCTTTTATATAAAGTATGGATCCTTTGAATTGCAT TGAGCTAACATTAAAGACACCAAATCAAAGGATCAATGATATCCAACTAA AGTGTAAAGAAGATTGGACCATCAAAAACTTAAAGGAACACTTGCAAGAT GTTTATCCTTCAAAGCCGGTATGTGTTAAAATTTCCTCTTTCCCCTGTTA GCTTTTGATGATTTTAAATCTTCTTAGAGAGTTCTAAAGAAAGATGTGCA TACAATTAGACCTCATTCACCCTTCCATGTTCTTCCTGGCTGTTTTTTCA GTACAAAATGCAGTTTTTATAGCTATCTCTTGTGACTTGTGTGTAATGTA AAAAATACTGTCAACTGCTCCAACTTGCCTTGGGACTACCTGACAAAACA TGGGACGGCAATTTGGCCAGGCAAAACGATGAAGCATTCATCATGTCACT TGCGCGGCAAGTTCAAGAGCAGCCACCGGCAGATTTATTTGAAATATCTG CTCTTTTTTTCTAGGAGTAAATTTTATGGATAAATCTAGGAAAGACTTTC CTCAAAACGCCCAGGTAAAATCCAGGGGTCGCCTTAAAGACATCTGTTCT TAAAATTCAGGAGCATGTTTTAAAGAAAAGCACATGCAATTTTGCAGCGG AAAATCCAGGAGCTAAAATTGTGAAAAACACAACCCAGATGCCAGATTTT TTTTTCCAAGGAGCTTCATAATTTTCATAAAAGGTCTCACTTTCTAGGAG CATTTTAACTTTCTTAGAAAATAGCTGTTATATATTTTTGCAAGTTACAC ACTCGTTATTAGTTAATCCCATTGGGCGCTAGGCGGTTAGGCAGCGGGCG TTCTCTAATTCTCCAATCTGCGTCCGGTCATTTTGAATGAAAACAAAAAA GTTAAAAAGGGCGCGCTATCAGTGAAAGTTATTGTGACATGTTATGACAG AAAGTATGATTGATAAACTTGGAAGAGTTATCAAAACAAATTTGTTGTCA AAGAGATTTAACAGTAAGTGAAAATACAGGCTAGATATCAACAGTCCCAT GTTTCGACCAATCATCCCAAGTTAGAACAGTTGACGGTAGGAGTTTAAGC TTAAATTGACTTATGGTTTTTGATGCTACAATCTTTTAAACTCCAGAAAA GTCTAGTTCTACTTTGCAATCTTTCTGAATAAAGTGCGCATGCACTGAAA TTTAAAATCAGTTGGGAAAATACACGTTTTTTATGAGCCTTAACTTGGCT CCGAGCCTGGAGTTCTTTATTTTTCAAGAATGTTTCAGCCTCAAAGTTCC TTACTTACTAAGCTGCTAGTTTCGAATTTTTCAGTTGTAAATTTTTTCTG AGGCTGAAATCTGCCTCACAGGTCAATACCCGTCCTGTTTAAAATCAGAT TATAAAAATACAGGACAAGTCTGCTGTCTAGAGCAGTTCCTTAACAATTC CTTATTTTTCGGGCCATTTTCAGCCTAAAGTTCCTTATAAACATGTTCCT TATAAAGAAACGTTTAGGTATCTTTAATCCCCCACCCAAATTGTTTCTGC CTTAACTGCGTTCACTTTCTATTGCAAAACTTAGTCATGGGCACATGATT GACTTCTAGGCTTGAAAGCAAACCTGGATGAAATGAACTGACCAACAACA GTGCCTTGTTTTTATTCTGTTTAAATTAAAGGCTGCTACACACTCAGCAT TTTATGGTCGGCGAACAAGATACACGGCTCAGGCGCTTTGGTCGCTGTAC GCTTTTCTCATTCCACTCTGCAGCACATGTTTTTCTCTCTTCTTTTGTTT ATCATCTTTTTGCACATGATACACATCTTTTGCACACGAGACAAGAAAAA AATCTCTCTTCTGATTGGTTGATTTGATAAAAACAAAGGGTGTGCTGTTC AGCTTCGCGAAAAAAGTTAAAAGTTTCAACTCTTGTTGCGCTCAAAGCAA ACGCCTTTGAAGGCTTGAATTATGTAATTTATTCAATAATTAAGCCGTGC ACCTTGTTCGACGACCATAAAATGCTGAGTGGGTAGCAGCCTTTAATTTA AACAGAATAAAAACAAGGCACTGTTGTTGGTCAGTTCATTTCATCCAGGT TTGCTTTCAAGCCTAGAAGTCAATCATGTGCCCATGACTAAGTTTTGCAA TAGAAAGTGAACGCAGTTAAGGCAGAAACAATTTGGGTGGGGGATTAAAG ATACCTAAACGTTTCTTTATAAGGAACATGTTTATAAGGAACTTTAGGCT GAAAATGGCCCGAAAAATAAGGAATTGTTAAGGAACTGCTCTAGACAGCA GACTTGTCCTGTATTTTTATAATCTGATTTTAAACAGGACGGGTATTGAC CTGTGAGGCAGATTTCAGCCTCAGAAAAAATTTACAACTGAAAAATTCGA AACTAGCAGCTTAGTAAGTAAGGAACTTTGAGGCTGAAACATTCTTGAAA AATAAAGAACTCCAGGCTCGGAGCCAAGTTAAGGCTCATAAAAAACGTGT ATTTTCCCAACTGATTTTAAATTTCAGTGCATGCGCACTTTATTCAGAAA GATTGCAAAGTAGAACTAGACTTTTCTGGAGTTTAAAAGATTGTAGCATC AAAAACCATAAGTCAATTTAANAATCATACTTTCTGTCATAACATGTCAC AATAACTTTCACTGATAGCGCGCCCTTTTTAACTTTTTTGTTTTCATTCA AAATGACCGGACGCAGATTGGAGAACTAGAGAACGCCCGCTGCCTAACCG CCTAGCGCCCAATGGGATTAACTAATAACGAGTGTGTAACTTGCTGGGCG AGTGGCGTCAAACGCTCCATCGTTTTGCCACTAATTTGGTCTTCTTCGTT CCAGACATTCGCGTGTTTTCCACTTCGAATTTTTTTCTTCATATTTTTGA TTAAATCTCTAAAAAAGGGTGTCATAATTAGATGAAGGATCCTAACATTA GATGGTTCTAATCAACTGGTTCATTTTTACACCTCATCTAATGAAAATGG AATTAAAACATTACAGTAGTTTTGAAAGTTTGTGTGGTTGTAAGCTATTG TGGTAAATTAGCTCCCCTTTACTTTTGCAATGTAAAAATTGAAAGAAATG ACCTTTTATTGAAAATTAACCGTCTCAATTGTTCTGGTTTATTGATCAAT CATACAAAAGCAGATTAGTCCTATGGGGGTCTCCTTTTCATCGTTCCAAA TAGTTTTAGTTTGATGCTTCGCCAGTGTGAAATAACATTTTGAATGTTTT GATGTTTTAGAATCCCATTGACAAACCTTTATGGAAAGTCCTTATAGACG ATTTTTCTTAACCAACAGTTGCATGGTATTATTAATAAACTGTTTTTTCT TTATAGAAATGGAATTCACAAAAGCTAATTTATCTTGGTAAATTGCTTCA AGACGATCATGCACTGATAAAAGAGGTCTTTTCTGTAAGTATTATTAATG AAGTATATAATTTTACTAGTTTTTATTAGGGAAATGGAAAAATGGAGACT CGATAGCTATTAATATATATGTAGCCCTATTCTTCTTAATATTTAATTCT CCTATTACAGTATATAAATGTTAAGATGAATGTAGCAAATGATTATAGTT GTTTTAGAGAAAGTGACGGACTATTGAATAACTAATTACTCCACAACAGT TACCTAGAGACAAGATCATTTATCACTTTTTATTGGCTGAGGGAAAGTAA TGTATGTGAAGTAATTTGTTATTCAATAGGCCGTCGCGTTCTCCAAAATA ACTATTGTAGAGCCCTAATCCTAGATTCATTTCCCAAACTTTGTAAAACC CCATCAGTTATTAAGCCTATTACTTTGAGTTAATACCTCATTCTTTTAAA TGTCGCCTCAAATAAATGACCTTCTTTTATAGAAAACTTTGGAAACTGCC CTCAAATAAACACGCCTCTTCTTTTTATGTATTGGAACTGATTTTTGCCT GTTGCTACATCCCTAAAATGGCATATTTCTATTGAAGTTACCTTATAGTT CTAAACTATTAACTTAACCCCCCTCTTTTAACCATCTAAGAAACACTGTG GTATTTATTTGAAGTAACACGGTATTAGCTTCGTCGTATATATGAATTTT TATTTTTTTAGAGCTGTGCAAGAACATTCCATCTAGTTTGTCATGAAACA CAAACTGCAGAATATATTCCTTCACAAACACCCTCTCAGAGTCCAGTAAG TACAGTAAGTTTGTCCTATTACTTTTCCATGTTTGACCTCAATAGAAAAT CAAATCTTAATTTAATGGCCGCTCTCTTATACAAAGCTTGAAAATTATGC ACAGTGTTTGAAAAATATTGTCGATGCATAGTCAGAAGAGAATTGCATTA ATGTCTTGATTTCAGGCTTTTAGAAAGATCAATAACGACTTCCTCTGTAG TTTGAGTCATATACTTGACTGTACTTGATTACCACATAATATTTTGCCAG AGATCTCTAAATAAAATTCAACAAAATCGATAAACATAAATTGGTCAAAC AGGGTTACAGTGTGGAATACAATCAAATCAAAAATGTATTTTTATTTTTC AGCCCACCCAAAGTTCTGACACTGCTACCTCCTCTTCCTCAATGCCCACA ACGACAGATACCACTGATGGATTAAGGTTCAGAGGTACTCAGCAAGCACA ACCAAGGTCAGTCAATTTTGTTATTACTTGAAAGAAGATTGTCATTAACT TTTAGATTAGTCCTGCTCCTGTAAAACTGAAAATGCAAGCTAGTTCATAA ATTGTATTCAAATCAAAAGCTATGAATGTCAGTGAACTCTGTATATTATT TAACCTCGATAGAAGCACTTGTGTATTCCATTACTACAAAATCATTCTCA ACAGAGAGAGATGCTCTCAAACTTGAATGTCACTTTCAACCAAAAAGTGT AGTACCAAACATAGTACATATTTCTTTTACAAAATAATTCTCGAGCACGA ATTTCACTTTAAACTTGAAAGAGTGGCAATGAGCAATTGTTTTTTATTTC TTTAAAACTTCCTAGCTCTGAGCAACACCAACCGTCTCCATCAATGTCAC CATCAATGTCACCATCACCTTACAATTTTCCGATCAATATGCAACAATAC CAACAGCTGAACCCACAACAGCAATATCAATTACAAATGCAACAATATTA CATGCAAATGCAGCAATGGCAATATGCAATGTCTACCGGACAATGGCCCT ACCAACAAAAGTAAAACTCCTTTTAACAAATGAATTTTGCATAGCATCTC TCAAACTAAATTCTCTCTTTCTCCATTTTCCTGAAGTCTTAAACAAGAGG TCGATTTTGTGCTTTTCTCTTAATATGTTAAAAAAAAATTTGTTAGAAAC TTTTATTCCTTTTCAGTAGTCAGCCTGCAACACCTTCTTCATTCACTGCT ACTCCACCAGCCACACCGCTTTCTCCACAAGAGCAACCACAACCACAAGC TGCACAACCTGCACAACCAGAAGCCCCTCAACCGGCACCACAGCAACGTC CACAAAATGTTCCCATGAATGCCGGCCCAGGCGGTGCCATGATACAAGAT GATAATGAAAATGGACAGAATCGTGATTGGTTGGATGTGTTATACATGTC AATGAGAGGATTGATGTTATTGAGTATCATATATTTCTATTCTTCAACTA GTCGCTTCTTGCTGGTTACTATATTGGGTTTCATTGTTTACATGTACCAA GCAGGATGGTTTACAATGAACAGACCGAACCCACCTCAGGAACAAGGTTT GTTGGTAGTTTTTTTATCAAACTTCATGTTTTTGCTAAGTAATTATAAAC TTTCCTCTATCGGGGAGTGTTTTGGAATTTTTGAAGCTAGTTGGGATATG TATATGTTGATAGGGGTTGAAATTTCCCATGTAATCACGGAATATATATT GTAAAAGTTTTTTTTTTTTTTCTAAAAATTTTTGACCTGACCCGATATTT ACTTGGAATGATCTTGAATACTTTACAGTTTTTCTGTCGGCTTTCTTAGG TCTCTTCAAACAGCTTACTTATATTATTATTAACATATCAATACTCCTAT TTTTCCAGATGCAGCAGCACAGAATAATGTTGACCAACCAGATGGAGAAG GACATCAAAACGAAGAAGAAGAAGGAGAACAAGATGAACAGAACAATACA GAACAAGATGAGAACAATACAGAGAACAATGAAACCAACGAAACCATTGA ACCTCCTTCTCCAAGTGTTTTTCGAATCTTTTGTACTTTCATTGTATCTT TTGTGACCTCACTCATTCCTGCTACTCCCCCACCACTTCAGCAGAATTAA GCTCTTCTTTTTTCGTTTTTTTTTTTTTTGGAAAGATATTTTTATATACT CGTAATATTTTGTAATATATAAGTTTTCGAAGTTAAGCACCTCAGATCAT TTGATAAATTGTTGTTCGTAATGCTGTTATGAACAGAAAAGAAAGAGAGT CACGTCTATTTCGACTAATACTTGAACATTTTTTCGCGAAATCTTTGGCG AAGCCGTTCGTGACTTTTTTTACTGAAAAAAAGTGAAAATTACGAGATTG ACAAAAATGTAACAGATTTTCAACTCACATGAGAAGCTTTCCTTGTTTTC CTACCGTTGGTTTATAATTTATTTCAAAAGATTTTATTTTACTTTTTATA TATGTTTATCTTTTTTTACAGTATAAAATAATTCTGCTGTGAAAACTCTA TTGACACGTGGTGCTTAGGGAAAGTGCTGTTTTTTTTCGTAAAATATTCC AAAGGTTCATCAACAATATTTGCTTAACCCCTTCCGAATGAGAGGAATCC CTAATAGAAAATAAAGGAATCCCCAAGAAAAAAAATTCAGATCTGAGACT TTCTCACTGGAATTTTCATGTCTTTCAAAACTGTTACTACGTAAACCCTT GGGAAGGCAATAAGACTTTCTCAAGTTTGACCTCATGAATATTTCTTGAT GGATTTTTATATATGGTAGAATAAAGGAAAAAGGATTTATATAAAATATC ATATTATGCTAAAATAGTATCTTATTATACAATGTTATTATAAAGNTAAA GGAAAAAGGATTTATATAAAATATCATATTATGCTAAAATAGTATCTTAT TATACAATATTATTATAAAGGTATAATGTTTTCAGTAAGCGGACGATAGA TTGGATATCTTAAAGGCATTAGACTTATGGTATTGGGGTTGACCAAATGA TAAAATGTTAGGTTTGAAATGTCAATCGAAATTATTTGAATTTATTTTCA AACATAATGTCATAGCTCTGATCTATTTTTGCTACACGATTCTTCATTTT TCCCACGATTGTTTCAAGAGTTTATTAAGTCTCTTAGAAACATACTAACA CTTTAAATAAATATTTCTTCCTAATATGGTTTGGTTTCTAAGGTAACAAC TGGTAGCCATAGCAACATACAGAATCGTATTTTGTATCACATTACTCAGA CCAAGGAGCTTGTTCAACCCTATACAATATGATAGATTTTTCTCTGTGAT TTTTCTTTGTTGTACATAGTATAAATAGTTGTTGTATCATTGTGATCCTA AAAAAACAAAACATAAAACACTTTTTCGGACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073005TCONS_00073005Clytia hemisphaericatranscript
TCONS_00073004TCONS_00073004Clytia hemisphaericatranscript
TCONS_00073003TCONS_00073003Clytia hemisphaericatranscript
TCONS_00073002TCONS_00073002Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073003-proteinTCONS_00073003-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:592720..600402 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HERPUD2homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.15 8.69 2.45 1.57 21.92 15.74 25.16 27.67 24.13 25.33 35.11 26 45.9 49.4 20.68 24.93 20.99 25.29 49.39 46.68 47.25 46.56 23.82 31.49 79.89 65.09 42.98 38.67 20.25 19.89