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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072710 ID=TCONS_00072710|Name=TCONS_00072710|organism=Clytia hemisphaerica|type=transcript|length=1913bp
cgaaattaaaaaaaatttattttgctgTCCTTACTGCGATTTTTTTGCTC
TTGCTTTGCAGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAA
GATGAGAGAGTGTATTTCAATCCACGTTGGACAAGCTGGTTGTCAAATCG
GTAACTCATGCTGGGAATTGTATTGTTTGGAACATGGAATCTCCCCCGAT
GGAACAGCTACCAATGAAATCACTGGAGATGAATCGTTCAGTACTTTCTT
TAGCGAAACGGGTGCTGGAAGACATGTTCCAAGAGCTGTTTTCGTTGATT
TGGAACCATCGGTTATTGATGAAATTCGATGCAGTACCTACAAATCCCTC
TTCCATCCTGACCAAATGATCGCTGGTAAAGAAGACGCCGCTAACAATTA
CGCCAGAGGTCATTACACCGTCGGTAAAGAGTACATCGACCGAACTTTGG
ATCATATCCGTAAATTGGCGGATCAGTGCACTGGTCTTCAAGGATTCTTG
TTGTTCCATTCCTTTGGTGGAGGTACCGGATCTGGTTTCTCGTCTCTCCT
CTTGGAAAGATTATCCATTGATTTTGGTAAAAAAGCCAAATTGGAATTTG
CTGTTTATCCAGCACCACAAGTCTCCACAGCTGTTGTTGAACCATACAAC
TCTGTCTTGACCACACATACCACTTTGGAGCACTCCGATTGCACTTTCAT
GGTGGATAATGAAGCTATCTATGATATCTGTCGCAAGAATCTGGACGTCG
AGCGTCCATCATATCACAATCTGAACCGAATGATCAGTCAAGTTGTTTCC
TCAGTCACTGCATCTCTTAGATTTGACGGCTCCTTGAATGTCGATTTGAA
TGAATTCCAAACCAACTTGGTTCCATACCCTAGAATCCATTTCCCGATGG
CCACTTATGCTCCTTTAGTTTCTGCTGAGAAAGCATACCACGAAAATCAT
TCAGTTCAAGAAATCACAAATGCTTGTTTTGAGCCTCAAAATCAACTAGT
CAAATGTGATCCAAGACACGGCAAATACATGTCTTGTTGTCTTCTCTACC
GTGGAGATGTGGTCCCAAAAGATGTCAATGCTTCCATCTCTGCCTTGAAA
ACTAAACGCACTATTCAATTCGTCGATTGGTGTCCAACCGGATTCAAAAT
CGGAATCAATTACCAGCCACCAACTATTGTTCCTGGAGCAGACATGGCTA
AAGTTTCCAGAGCTGTTTGCATGTTGTCTAACACAACTGCCATTGCTGAA
GCATGGGCTCGTCTTGATCATAAATTCGATTTAATGTACGCAAAACGTGC
TTTTGTGCACTGGTATGTCGGAGAAGGTATGGAAGAAGGTGAGTTCTCGG
AGGCTCGTGAAGATTTAGCTGCTCTTGAGAAAGATTACGAAGAGGTCGGA
ATGGATTCAGCAGATTGCGAAGACGAAGAAGATGAAGATTATTGAGGCTA
GAAATTTGTAGAAAAGAACTAttagaaattaataaaatgGAAGAGCTTTC
GACAATATTTGTTTATCAAGATTGACCAAATTTTAATTACAGAGTAATCT
AATTGGATGAGTTGTTTTTATTCCAGGTATTTTGGAATCATTGATTAAAT
TATTGGTTGCGTTTAAAATTATCTTTTAGTAAATTTTTCTCTCGTGTGCA
TTGTTAactatttttgaatatttaaacatattaactttctttatttttga
aatctaatgACATTTTAGCAAGTTATActttttatctaaaaagctaTTTT
TTCTTTGTCTAGTGTCTTCGTTAAAATCTTTCGCTCCGAAGAAATAAATT
AGACAAGAAACTAATCTCAGCAAGTCCAAAATTCACTCAAAACAGGTGTA
ATAGAAGTTACGACAAGTGGAAAATTCTATTTCTCCTAGTTGAAAAACCT
CCCGAGGGGAAAC Run BLAST on NCBI protein sequence of TCONS_00072710-protein >TCONS_00072710-protein ID=TCONS_00072710-protein|Name=TCONS_00072710-protein|organism=Clytia hemisphaerica|type=polypeptide|length=480bp
KLKKIYFAVLTAIFLLLLCRRNNVENKILEVEKMRECISIHVGQAGCQIG
NSCWELYCLEHGISPDGTATNEITGDESFSTFFSETGAGRHVPRAVFVDL
EPSVIDEIRCSTYKSLFHPDQMIAGKEDAANNYARGHYTVGKEYIDRTLD
HIRKLADQCTGLQGFLLFHSFGGGTGSGFSSLLLERLSIDFGKKAKLEFA
VYPAPQVSTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDICRKNLDVE
RPSYHNLNRMISQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPMA
TYAPLVSAEKAYHENHSVQEITNACFEPQNQLVKCDPRHGKYMSCCLLYR
GDVVPKDVNASISALKTKRTIQFVDWCPTGFKIGINYQPPTIVPGADMAK
VSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGMDSADCEDEEDEDY Run BLAST on NCBI transcript from alignment at scaffold_82:502246..506111+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072710 ID=TCONS_00072710|Name=TCONS_00072710|organism=Clytia hemisphaerica|type=transcript|length=3866bp|location=Sequence derived from alignment at scaffold_82:502246..506111+ (Clytia hemisphaerica)
cgaaattaaaaaaaatttattttgctgTCCTTACTGCGATTTTTTTGCTC
TTGCTTTGCAGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAA
GATGGtaaacttatttctttaaaattgtttGATCCAACTTCCAAAAGAAA
ACCCAGAAAGAACGGGTACGGGGAATATATATAATCTCCAATATGGCAAT
TTACGAGATATACTGTAGACCTTAAAATTCTGACGAAGTATTACTTTGAC
AAGACTTATCGTGAGGCATTGAGAGATTTTAgaagtatatttaaaaaaaa
aaaaaaagactttagcTAGACATTACATTACGTGTCAATATGGCAAACGC
AAATTAATTTGCGGATATTTTAGTGAATAGCATTTCATAATTACAAAAAC
AATTTCGTTTCTCTCTCAATCGGATGCAATTCAGTTGTAAAGAGTAATTT
ACGTCTGTACAACCCATTTCTTTCAAAGACATTTGAATTGTGTAAGACGA
AAAACAAAACCCAGAATAAACGCAATAGCTTGTAGAACCAATGCAAAAAG
ACCTAGAGGTCATCAAAAATGGGGATCATTCCTTTCCCTCAGTATCTTAA
TCAACGTGGTTTTGCGACTGGAGCTATTCATCCCTTATGCTAAAATCATT
ATAAAGTGATTGAAGCCCGATTGAAGGGGCTACAGAGGAATCTTCAATCT
TTCTCAACTCAAGCTAGCAAAAGTTCAGCattaagattttaaattttgtg
tgAAAATGCTACATAAAGTTTTAAAGTTAATGAATAGTTCAATTGGATTT
AATCGTTTGATTCCGTTCCCAATTTTTAGAGAGAGTGTATTTCAATCCAC
GTTGGACAAGCTGGTTGTCAAATCGGTAACTCATGCTGGGAATTGTATTG
TTTGGAACATGGAATCTCCCCCGATGGAACAGCTACCAATGAAATCACTG
GAGATGAATCGTTCAGTACTTTCTTTAGCGAAACGGGTGCTGGAAGACAT
GTTCCAAGAGCTGTTTTCGTTGATTTGGAACCATCGGTTATTGGTAAGAT
TCTTTGCAGCAAACATCAAAACCTCGTCTATCTAAATTAGCCTATCTCAA
ATGATTCACTCATCTGTTACATGCTTTTTTATTCGAATTCAATTGATTTG
AGGAAATTCATGAACTTTCTTCTATTGCTGTTGATTTTGTAAAACTCAAT
TCGTAAAAGAGTGTTCAAACATTAAAAGTTGAGTACTATGGTGACGTAGA
AAAATatcatgtactgaaaacacGAATCCTATAAAATGTCAAGGTGAACT
TTGAGCTGACATAGTTTGGTGTCTGAAATTGACTGGAATTGACTTTTAGA
GATACATCCTTTCAATTCAACTAACACTTTATTCAAAGTTGTTTGATACT
TTAGATGCGGATCAGAATGCAACATGCAAAATAGTTCTTCTGTTCAAACA
CAAGCAGAAAGACTTTTTATTGAAGGACCTCAGATTTTCAGAAATCTAGA
GGAAGAACATAGGTGGTTTTAGACCCTGTAGAACTTATCAgatatttgta
attgtaattcattgtttttttaacGAGCGTTACGCTCCTTCGCATGTTCC
CGACGTACTCGCTCTTGAATATTGTATCATTGTTTGATTATATATTGTAG
TTGAACACCATTTAAGAGTGCTCGATAACTGTGTAGAGCCAttcataaat
ttatttcaagATTTCACTGTTAAAAAAGTACATTACTTCGAGTTTCATGC
TTACGGCAAATCATCAGACGTACAAATAAAAACACTTTCCTATATTTATT
TACAGATGAAATTCGATGCAGTACCTACAAATCCCTCTTCCATCCTGACC
AAATGATCGCTGGTAAAGAAGACGCCGCTAACAATTACGCCAGAGGTCAT
TACACCGTCGGTAAAGAGTACATCGACCGAACTTTGGATCATATCCGTAA
ATTGGCGGATCAGTGCACTGGTCTTCAAGGATTCTTGTTGTTCCATTCCT
TTGGTGGAGGTACCGGATCTGGTTTCTCGTCTCTCCTCTTGGAAAGATTA
TCCATTGATTTTGGTAAAAAAGCCAAATTGGAATTTGCTGTTTATCCAGC
ACCACAAGTCTCCACAGCTGTTGTTGAACCATACAACTCTGTCTTGACCA
CACATACCACTTTGGAGCACTCCGATTGCACTTTCATGGTGGATAATGAA
GCTATCTATGATATCTGTCGCAAGAATCTGGACGTCGAGCGTCCATCATA
TCACAATCTGAACCGAATGATCAGTCAAGTTGTTTCCTCAGTCACTGCAT
CTCTTAGATTTGACGGCTCCTTGAATGTCGATTTGAATGAATTCCAAACC
AACTTGGTTCCATACCCTAGAATCCATTTCCCGATGGCCACTTATGCTCC
TTTAGTTTCTGCTGAGAAAGCATACCACGAAAATCATTCAGTTCAAGAAA
TCACAAATGCTTGTTTTGAGCCTCAAAATCAACTAGTCAAATGTGATCCA
AGACACGGCAAATACATGTCTTGTTGTCTTCTCTACCGTGGAGATGTGGT
CCCAAAAGATGTCAATGCTTCCATCTCTGCCTTGAAAACTAAACGCACTA
TTCAATTCGTCGATTGGTGTCCAACCGGATTCAAAATCGGAATCAATTAC
CAGCCACCAACTATTGTTCCTGGAGCAGACATGGCTAAAGTTTCCAGAGC
TGTTTGCATGTTGTCTAACACAACTGCCATTGCTGAAGCATGGGCTCGTC
TTGATCATAAATTCGATTTAATGTACGCAAAACGTGCTTTTGTGCACTGG
TATGTCGGAGAAGGTAAGTTgcagtattttcaaaaataactgaTGAGGTT
TATCAGTAGGCGAAGGAATCTTACTAAAACCTACCAACCTAATAGTGATT
TCAGCAAACCCAAGGTCCTCTTTGTATATGGATAGCTAGCTGTCTACTCA
AAATTACGACCGTAGCAGAATGCTATACCTTTATACTAAGGTCACGTGGT
CTTACttctgttgttgttgctgttgttggtCTCATTAGGATTTAGCTTGA
CTCATTTTCCATAAAcataccgagtttatcgttctacatctgaaatttta
gttttgctaagctcatttgacgtcaatcgatacCTCGATTGTTAAGTGtg
tgtgaaggtttcgatcacagacttgcaccgcaatggactgtgttcgaatt
cCAAGCACTGCCAgacagggtgttagggaaatatggtgataccTTCACTC
ATACGTCAATTTCTATATTTCATTTCTAGGTATGGAAGAAGGTGAGTTCT
CGGAGGCTCGTGAAGATTTAGCTGCTCTTGAGAAAGATTACGAAGAGGTC
GGAATGGATTCAGCAGATTGCGAAGACGAAGAAGATGAAGATTATTGAGG
CTAGAAATTTGTAGAAAAGAACTAttagaaattaataaaatgGAAGAGCT
TTCGACAATATTTGTTTATCAAGATTGACCAAATTTTAATTACAGAGTAA
TCTAATTGGATGAGTTGTTTTTATTCCAGGTATTTTGGAATCATTGATTA
AATTATTGGTTGCGTTTAAAATTATCTTTTAGTAAATTTTTCTCTCGTGT
GCATTGTTAactatttttgaatatttaaacatattaactttctttatttt
tgaaatctaatgACATTTTAGCAAGTTATActttttatctaaaaagctaT
TTTTTCTTTGTCTAGTGTCTTCGTTAAAATCTTTCGCTCCGAAGAAATAA
ATTAGACAAGAAACTAATCTCAGCAAGTCCAAAATTCACTCAAAACAGGT
GTAATAGAAGTTACGACAAGTGGAAAATTCTATTTCTCCTAGTTGAAAAA
CCTCCCGAGGGGAAAC Coding sequence (CDS) from alignment at scaffold_82:502246..506111+ >TCONS_00072710 ID=TCONS_00072710|Name=TCONS_00072710|organism=Clytia hemisphaerica|type=CDS|length=5772bp|location=Sequence derived from alignment at scaffold_82:502246..506111+ (Clytia hemisphaerica)
aaattaaaaaaaatttattttgctgTCCTTACTGCGATTTTTTTGCTCTT
GCTTTGCAGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAAGA
TGAGAGAGTGTATTTCAATCCACGTTGGACAAGCTGGTTGTCAAATCGGT
AACTCATGCTGGGAATTGTATTGTTTGGAACATGGAATCTCCCCCGATGG
AACAGCTACCAATGAAATCACTGGAGATGAATCGTTCAGTACTTTCTTTA
GCGAAACGGGTGCTGGAAGACATGTTCCAAGAGCTGTTTTCGTTGATTTG
GAACCATCGGTTATTGATGAAATTCGATGCAGTACCTACAAATCCCTCTT
CCATCCTGACCAAATGATCGCTGGTAAAGAAGACGCCGCTAACAATTACG
CCAGAGGTCATTACACCGTCGGTAAAGAGTACATCGACCGAACTTTGGAT
CATATCCGTAAATTGGCGGATCAGTGCACTGGTCTTCAAGGATTCTTGTT
GTTCCATTCCTTTGGTGGAGGTACCGGATCTGGTTTCTCGTCTCTCCTCT
TGGAAAGATTATCCATTGATTTTGGTAAAAAAGCCAAATTGGAATTTGCT
GTTTATCCAGCACCACAAGTCTCCACAGCTGTTGTTGAACCATACAACTC
TGTCTTGACCACACATACCACTTTGGAGCACTCCGATTGCACTTTCATGG
TGGATAATGAAGCTATCTATGATATCTGTCGCAAGAATCTGGACGTCGAG
CGTCCATCATATCACAATCTGAACCGAATGATCAGTCAAGTTGTTTCCTC
AGTCACTGCATCTCTTAGATTTGACGGCTCCTTGAATGTCGATTTGAATG
AATTCCAAACCAACTTGGTTCCATACCCTAGAATCCATTTCCCGATGGCC
ACTTATGCTCCTTTAGTTTCTGCTGAGAAAGCATACCACGAAAATCATTC
AGTTCAAGAAATCACAAATGCTTGTTTTGAGCCTCAAAATCAACTAGTCA
AATGTGATCCAAGACACGGCAAATACATGTCTTGTTGTCTTCTCTACCGT
GGAGATGTGGTCCCAAAAGATGTCAATGCTTCCATCTCTGCCTTGAAAAC
TAAACGCACTATTCAATTCGTCGATTGGTGTCCAACCGGATTCAAAATCG
GAATCAATTACCAGCCACCAACTATTGTTCCTGGAGCAGACATGGCTAAA
GTTTCCAGAGCTGTTTGCATGTTGTCTAACACAACTGCCATTGCTGAAGC
ATGGGCTCGTCTTGATCATAAATTCGATTTAATGTACGCAAAACGTGCTT
TTGTGCACTGGTATGTCGGAGAAGGTATGGAAGAAGGTGAGTTCTCGGAG
GCTCGTGAAGATTTAGCTGCTCTTGAGAAAGATTACGAAGAGGTCGGAAT
GGATTCAGCAGATTGCGAAGACGAAGAAGATGAAGATTATTGAaaattaa
aaaaaatttattttgctgTCCTTACTGCGATTTTTTTGCTCTTGCTTTGC
AGAAGAAACAACGTTGAAAATAAGATCTTGGAGGTTGAAAAGATGAGAGA
GTGTATTTCAATCCACGTTGGACAAGCTGGTTGTCAAATCGGTAACTCAT
GCTGGGAATTGTATTGTTTGGAACATGGAATCTCCCCCGATGGAACAGCT
ACCAATGAAATCACTGGAGATGAATCGTTCAGTACTTTCTTTAGCGAAAC
GGGTGCTGGAAGACATGTTCCAAGAGCTGTTTTCGTTGATTTGGAACCAT
CGGTTATTGATGAAATTCGATGCAGTACCTACAAATCCCTCTTCCATCCT
GACCAAATGATCGCTGGTAAAGAAGACGCCGCTAACAATTACGCCAGAGG
TCATTACACCGTCGGTAAAGAGTACATCGACCGAACTTTGGATCATATCC
GTAAATTGGCGGATCAGTGCACTGGTCTTCAAGGATTCTTGTTGTTCCAT
TCCTTTGGTGGAGGTACCGGATCTGGTTTCTCGTCTCTCCTCTTGGAAAG
ATTATCCATTGATTTTGGTAAAAAAGCCAAATTGGAATTTGCTGTTTATC
CAGCACCACAAGTCTCCACAGCTGTTGTTGAACCATACAACTCTGTCTTG
ACCACACATACCACTTTGGAGCACTCCGATTGCACTTTCATGGTGGATAA
TGAAGCTATCTATGATATCTGTCGCAAGAATCTGGACGTCGAGCGTCCAT
CATATCACAATCTGAACCGAATGATCAGTCAAGTTGTTTCCTCAGTCACT
GCATCTCTTAGATTTGACGGCTCCTTGAATGTCGATTTGAATGAATTCCA
AACCAACTTGGTTCCATACCCTAGAATCCATTTCCCGATGGCCACTTATG
CTCCTTTAGTTTCTGCTGAGAAAGCATACCACGAAAATCATTCAGTTCAA
GAAATCACAAATGCTTGTTTTGAGCCTCAAAATCAACTAGTCAAATGTGA
TCCAAGACACGGCAAATACATGTCTTGTTGTCTTCTCTACCGTGGAGATG
TGGTCCCAAAAGATGTCAATGCTTCCATCTCTGCCTTGAAAACTAAACGC
ACTATTCAATTCGTCGATTGGTGTCCAACCGGATTCAAAATCGGAATCAA
TTACCAGCCACCAACTATTGTTCCTGGAGCAGACATGGCTAAAGTTTCCA
GAGCTGTTTGCATGTTGTCTAACACAACTGCCATTGCTGAAGCATGGGCT
CGTCTTGATCATAAATTCGATTTAATGTACGCAAAACGTGCTTTTGTGCA
CTGGTATGTCGGAGAAGGTATGGAAGAAGGTGAGTTCTCGGAGGCTCGTG
AAGATTTAGCTGCTCTTGAGAAAGATTACGAAGAGGTCGGAATGGATTCA
GCAGATTGCGAAGACGAAGAAGATGAAGATTATTGAaaattaaaaaaaat
ttattttgctgTCCTTACTGCGATTTTTTTGCTCTTGCTTTGCAGAAGAA
ACAACGTTGAAAATAAGATCTTGGAGGTTGAAAAGATGAGAGAGTGTATT
TCAATCCACGTTGGACAAGCTGGTTGTCAAATCGGTAACTCATGCTGGGA
ATTGTATTGTTTGGAACATGGAATCTCCCCCGATGGAACAGCTACCAATG
AAATCACTGGAGATGAATCGTTCAGTACTTTCTTTAGCGAAACGGGTGCT
GGAAGACATGTTCCAAGAGCTGTTTTCGTTGATTTGGAACCATCGGTTAT
TGATGAAATTCGATGCAGTACCTACAAATCCCTCTTCCATCCTGACCAAA
TGATCGCTGGTAAAGAAGACGCCGCTAACAATTACGCCAGAGGTCATTAC
ACCGTCGGTAAAGAGTACATCGACCGAACTTTGGATCATATCCGTAAATT
GGCGGATCAGTGCACTGGTCTTCAAGGATTCTTGTTGTTCCATTCCTTTG
GTGGAGGTACCGGATCTGGTTTCTCGTCTCTCCTCTTGGAAAGATTATCC
ATTGATTTTGGTAAAAAAGCCAAATTGGAATTTGCTGTTTATCCAGCACC
ACAAGTCTCCACAGCTGTTGTTGAACCATACAACTCTGTCTTGACCACAC
ATACCACTTTGGAGCACTCCGATTGCACTTTCATGGTGGATAATGAAGCT
ATCTATGATATCTGTCGCAAGAATCTGGACGTCGAGCGTCCATCATATCA
CAATCTGAACCGAATGATCAGTCAAGTTGTTTCCTCAGTCACTGCATCTC
TTAGATTTGACGGCTCCTTGAATGTCGATTTGAATGAATTCCAAACCAAC
TTGGTTCCATACCCTAGAATCCATTTCCCGATGGCCACTTATGCTCCTTT
AGTTTCTGCTGAGAAAGCATACCACGAAAATCATTCAGTTCAAGAAATCA
CAAATGCTTGTTTTGAGCCTCAAAATCAACTAGTCAAATGTGATCCAAGA
CACGGCAAATACATGTCTTGTTGTCTTCTCTACCGTGGAGATGTGGTCCC
AAAAGATGTCAATGCTTCCATCTCTGCCTTGAAAACTAAACGCACTATTC
AATTCGTCGATTGGTGTCCAACCGGATTCAAAATCGGAATCAATTACCAG
CCACCAACTATTGTTCCTGGAGCAGACATGGCTAAAGTTTCCAGAGCTGT
TTGCATGTTGTCTAACACAACTGCCATTGCTGAAGCATGGGCTCGTCTTG
ATCATAAATTCGATTTAATGTACGCAAAACGTGCTTTTGTGCACTGGTAT
GTCGGAGAAGGTATGGAAGAAGGTGAGTTCTCGGAGGCTCGTGAAGATTT
AGCTGCTCTTGAGAAAGATTACGAAGAGGTCGGAATGGATTCAGCAGATT
GCGAAGACGAAGAAGATGAAGATTATTGAaaattaaaaaaaatttatttt
gctgTCCTTACTGCGATTTTTTTGCTCTTGCTTTGCAGAAGAAACAACGT
TGAAAATAAGATCTTGGAGGTTGAAAAGATGAGAGAGTGTATTTCAATCC
ACGTTGGACAAGCTGGTTGTCAAATCGGTAACTCATGCTGGGAATTGTAT
TGTTTGGAACATGGAATCTCCCCCGATGGAACAGCTACCAATGAAATCAC
TGGAGATGAATCGTTCAGTACTTTCTTTAGCGAAACGGGTGCTGGAAGAC
ATGTTCCAAGAGCTGTTTTCGTTGATTTGGAACCATCGGTTATTGATGAA
ATTCGATGCAGTACCTACAAATCCCTCTTCCATCCTGACCAAATGATCGC
TGGTAAAGAAGACGCCGCTAACAATTACGCCAGAGGTCATTACACCGTCG
GTAAAGAGTACATCGACCGAACTTTGGATCATATCCGTAAATTGGCGGAT
CAGTGCACTGGTCTTCAAGGATTCTTGTTGTTCCATTCCTTTGGTGGAGG
TACCGGATCTGGTTTCTCGTCTCTCCTCTTGGAAAGATTATCCATTGATT
TTGGTAAAAAAGCCAAATTGGAATTTGCTGTTTATCCAGCACCACAAGTC
TCCACAGCTGTTGTTGAACCATACAACTCTGTCTTGACCACACATACCAC
TTTGGAGCACTCCGATTGCACTTTCATGGTGGATAATGAAGCTATCTATG
ATATCTGTCGCAAGAATCTGGACGTCGAGCGTCCATCATATCACAATCTG
AACCGAATGATCAGTCAAGTTGTTTCCTCAGTCACTGCATCTCTTAGATT
TGACGGCTCCTTGAATGTCGATTTGAATGAATTCCAAACCAACTTGGTTC
CATACCCTAGAATCCATTTCCCGATGGCCACTTATGCTCCTTTAGTTTCT
GCTGAGAAAGCATACCACGAAAATCATTCAGTTCAAGAAATCACAAATGC
TTGTTTTGAGCCTCAAAATCAACTAGTCAAATGTGATCCAAGACACGGCA
AATACATGTCTTGTTGTCTTCTCTACCGTGGAGATGTGGTCCCAAAAGAT
GTCAATGCTTCCATCTCTGCCTTGAAAACTAAACGCACTATTCAATTCGT
CGATTGGTGTCCAACCGGATTCAAAATCGGAATCAATTACCAGCCACCAA
CTATTGTTCCTGGAGCAGACATGGCTAAAGTTTCCAGAGCTGTTTGCATG
TTGTCTAACACAACTGCCATTGCTGAAGCATGGGCTCGTCTTGATCATAA
ATTCGATTTAATGTACGCAAAACGTGCTTTTGTGCACTGGTATGTCGGAG
AAGGTATGGAAGAAGGTGAGTTCTCGGAGGCTCGTGAAGATTTAGCTGCT
CTTGAGAAAGATTACGAAGAGGTCGGAATGGATTCAGCAGATTGCGAAGA
CGAAGAAGATGAAGATTATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072710-exon-scaffold_82-1491911889:502246..502349 | TCONS_00072710-exon-scaffold_82-1491911889:502246..502349 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1510915933:502246..502349 | TCONS_00072710-exon-scaffold_82-1510915933:502246..502349 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1575043694:502246..502349 | TCONS_00072710-exon-scaffold_82-1575043694:502246..502349 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1491911889:503075..503288 | TCONS_00072710-exon-scaffold_82-1491911889:503075..503288 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1510915933:503075..503288 | TCONS_00072710-exon-scaffold_82-1510915933:503075..503288 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1575043694:503075..503288 | TCONS_00072710-exon-scaffold_82-1575043694:503075..503288 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1491911889:504051..505058 | TCONS_00072710-exon-scaffold_82-1491911889:504051..505058 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1510915933:504051..505058 | TCONS_00072710-exon-scaffold_82-1510915933:504051..505058 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1575043694:504051..505058 | TCONS_00072710-exon-scaffold_82-1575043694:504051..505058 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1491911889:505525..506111 | TCONS_00072710-exon-scaffold_82-1491911889:505525..506111 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1510915933:505525..506111 | TCONS_00072710-exon-scaffold_82-1510915933:505525..506111 | Clytia hemisphaerica | exon |
| TCONS_00072710-exon-scaffold_82-1575043694:505525..506111 | TCONS_00072710-exon-scaffold_82-1575043694:505525..506111 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_82 | supercontig | scaffold_82:502246..506111 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0005200 | structural constituent of cytoskeleton |
| GO:0003924 | GTPase activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005874 | microtubule |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007017 | microtubule-based process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007017 |
microtubule-based process |
| cellular_component |
GO:0005874 |
microtubule |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
| molecular_function |
GO:0005200 |
structural constituent of cytoskeleton |
Blast
BLAST of TCONS_00072710 vs. Swiss-Prot (Human)
Match: TBA1C (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1) HSP 1 Score: 761.14 bits (1964), Expect = 0.000e+0 Identity = 370/440 (84.09%), Postives = 412/440 (93.64%), Query Frame = 3
Query: 102 MRECISIHVGQAGCQIGNSCWELYCLEHGISPDGTATNEIT---GDESFSTFFSETGAGRHVPRAVFVDLEPSVIDEIRCSTYKSLFHPDQMIAGKEDAANNYARGHYTVGKEYIDRTLDHIRKLADQCTXXXXXXXXXXXXXXXXXXXXXXXXERLSIDFGKKAKLEFAVYPAPQVSTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDICRKNLDVERPSYHNLNRMISQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPMATYAPLVSAEKAYHENHSVQEITNACFEPQNQLVKCDPRHGKYMSCCLLYRGDVVPKDVNASISALKTKRTIQFVDWCPTGFKIGINYQPPTIVPGADMAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSA 1412
MRECISIHVGQAG QIGN+CWELYCLEHGI PDG ++ T GD+SF+TFFSETGAG+HVPRAVFVDLEP+VIDE+R TY+ LFHP+Q+I GKEDAANNYARGHYT+GKE ID LD IRKLADQCTGLQGFL+FHSFGGGTGSGF+SLL+ERLS+D+GKK+KLEF++YPAPQVSTAVVEPYNS+LTTHTTLEHSDC FMVDNEAIYDICR+NLD+ERP+Y NLNR+ISQ+VSS+TASLRFDG+LNVDL EFQTNLVPYPRIHFP+ATYAP++SAEKAYHE +V EITNACFEP NQ+VKCDPRHGKYM+CCLLYRGDVVPKDVNA+I+ +KTKRTIQFVDWCPTGFK+GINYQPPT+VPG D+AKV RAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG DSA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSA 440
The following BLAST results are available for this feature:
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