TCONS_00072219 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072219
Unique NameTCONS_00072219
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1684

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072219 ID=TCONS_00072219|Name=TCONS_00072219|organism=Clytia hemisphaerica|type=transcript|length=1684bp
TATTGACCCccggaattaaaaaaaaaatcagaacgTTAAGTAGGCGGAGG
TTTTCTACTCATCATCACCTATTTTCACGTTCACAGCAGATAGGAACAAG
TATTTCAGTACTGTAACAGAATCACAATCACCTGTCAAATATATTGAACA
AAAATGGGTCAAACTGATTTAACTTGTGGCATGTCATGCCTGAAGTATCT
TCTCTTTGTTGTCAACTTCATCGTTTGGgtttgTGGTATTGTTGTGTTTG
GTGTTGGAATTTACAGTCGTATCAAAGCTGGTGACTGGAAAGATTTGGTT
GAAGATGTCAGTGTTGTGGATGCTGCAAACCTTCTCATTGCCTCTGGTGC
CATTGTCATGGTTATTGGATTTGTTGGATGCTGTGGAGCCTTGAAACAAA
AAGGGGACGCTTTTGGTTATTTACATCATCCTTCTCATGCTTATCTTCAT
TCTTGAAATCGCTGGAGGAATCTACGCTGCCGTTAAGAAAGATGATGTTC
TCAAATCCTTGAAAACGAACTTCCAACGATTAATGACTACATCTTATGGA
CAAACCGAAAACAACAAAGCAAACGAGGGATACACTAACTCCATTGACTG
GTTCCAAGAAAATGTCAAATGTTGTGGCTCCACCGGACCTAACTCATGGA
AAAATACTACTTGGACTAACACCAACAGGGACAAGGCAGTTAACGGGTCA
GATTACCAACTCTTCCCAAAATCATGCTGCAAATCTGGTGATTGTAACAT
GGGAAATGGCTTCCCTGTTACTTCAAATGACAACATCTTCATGGATgGTT
GCGTGACAGAAAGTGAACAGTTCTTGAACGATCACATGAAAGAATTGGTC
GGTGTCGGTGTCGGTATCGCTTTTATTCAAATCATCGGTATCGTGTTCGC
CATcttattgtgcaaaaaaatcggAGTAGAATCTGTCTAAAGATTTCGAC
CACCAAGAACACATACACATTAAACTTCTTGatcataaatcaaaattttt
gtcttaagtatttttttttgttaagtATTTATTTTATCAACCACAGTCAG
GTGTATTAAACTGAATTTTGTATCGATTTCTTGTcagtcttttttatttt
agggTTAGCTCTTCCTTTTTTGGGTGATTTCTTTGTCACattttgtttaa
tatttttacttttttatattaATCGATGTTGTTTTAACACTTTGTATATT
CAAATTGACAGGAACTAACTGTGCGTGAAAGAATGTAATTAATCTTACTT
AGCTGATGTAAAATCACTTTGTGtttaggctgcacacatcccttCTGGTA
tgtttgatataggggatgcgtatcgtgtgtCTGATTCCCGTCGTAGAACT
TTCTttaaaagctttagaaattcAATGATTGTGGTTACTAATCATGTCtc
taaaacttaaaaacacaCAGACGGGTcaactctcggacgggaattagATA
CACGGTACGTAAATCCCATATATTAAAACATATCAGGAAATGTGTGCAAC
CTCTTGTGTTAGACGTTCCATGACCACGAAGGATATCCAAGTTATCCCAG
CTAGCGAACGTGAACGTTGTTTCAAAATATTAATGAAATTAAGACCTTGC
TGTTTTCAAATCTGTGTTCTGACCTCTCATATTTCTTAGATAAAAGTTAG
GTTGTTTTAGGCTGTGACTTTTATAGGGAATACC
Run BLAST on NCBI

protein sequence of TCONS_00072219-protein

>TCONS_00072219-protein ID=TCONS_00072219-protein|Name=TCONS_00072219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=167bp
MLIFILEIAGGIYAAVKKDDVLKSLKTNFQRLMTTSYGQTENNKANEGYT
NSIDWFQENVKCCGSTGPNSWKNTTWTNTNRDKAVNGSDYQLFPKSCCKS
GDCNMGNGFPVTSNDNIFMDGCVTESEQFLNDHMKELVGVGVGIAFIQII
GIVFAILLCKKIGVESV
Run BLAST on NCBI

transcript from alignment at scaffold_71:1182457..1191330-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072219 ID=TCONS_00072219|Name=TCONS_00072219|organism=Clytia hemisphaerica|type=transcript|length=8874bp|location=Sequence derived from alignment at scaffold_71:1182457..1191330- (Clytia hemisphaerica)
TATTGACCCCCGGAATTAAAAAAAAAATCAGAACGTTAAGTAGGCGGAGG
TTTTCTACTCATCATCACCTATTTTCACGTTCACAGCAGATAGGAACAAG
TATTTCAGTACTGTAACAGAATCACAATCACCTGTCAAATATATTGGTAT
GTATTTCTTACAACTAAATTTTGAATAGCTGTAACTCAATTCTTAGCATA
TTTTATATCAATCAAAAGTAAAGGAACACAATTTTGACAGCCAAAATAAA
CAGACCACTTTATTATTATATTTTAGCTCCTGTTTTTCTCGTTCATATTT
TATTCATAACTTGCTTTCCTACATTTTAACCTTTTATCTCTTCTTGATGA
AAAATAAGACTGTCTAGCTCTTTTGAGTTGCCATTTCCAAGATTTATTAT
TTTTATTCCACCTAACATTGTAGAACAAAAATGGGTCAAACTGATTTAAC
TTGTGGCATGTCATGCCTGAAGTATCTTCTCTTTGTTGTCAACTTCATCG
TTTGGGTGAGTGATTATCCTTAATTCAGTTTTGTGTATGTAATCATGGAG
TTGAATATGTCGGTAATTGGTCTTATGATTATTATAAATTGGGTCAAAAG
AAATTTTAAGGGCTCGCCTGATGAAATAAGACTTTCACATCGCTAGAACT
CAAGTTTGCTTTGAACTAAAATTCTAACTATACGTATTGACATTTTCAAG
CCTTCTAATATACAAGAATTAAATTATACCTAGCCCCACAAAATGGGTTT
ATGTTCCATGAAAGATATTTTCTTAAGCCAGAAAATGGAAAGTTCTTTTT
ATAAGCACTCGCTAATCCAGTCTGGAAAGGAGGGAAATGTTACGCCGGAG
ATGCGCCAACTTAACTTGGAAAAGCCAAAGGCAACAGATCTCAAATCTCA
AATCTACGCCGAATATATCCGGCGCACACGTCGCAATTTCCAGACTGGTC
GCTAATTCAGAATTTTTAGACAAAAAATTGCCTGGATGGTTTGGAATGAA
AGTATCAAGCAATAGATTTCATTAAAGAAAACATTGAATGAAAAATCTTG
TTATTTACATGCCTTTTTTAAGTCCAAGTATTTTCTTCAACACCAATGTA
AGAACCAATGGATCTTGTCTCATCTAATTTCTAACACTATAGAGCCAATA
CGATTTCATCAATAAACAAAAGAGCTCACTAAAAATGCACATTATATGAC
ATAATGAGCATGCAAACTTTAATCATAGTGGTTATTATAACAAACATCGC
CTGTTTTTTTATCATCAGGAATGTCCGACCCAAACAGCTTCATGTCCAAC
CCAAAAATCATAATTTTCAAGCTAAGGGAACCCTGATCAGACATTTTGTC
CGTCCCACTTGAAATCGTTATTTCGAGCCTTGTTTATATACCTCCATAAC
GTAATATTTGTTCCAAAAGACTTTGAGTTAAAAGGGCTAAAAATTTTGCT
ACTCATCTTAAATTCATTTTTGAGTTTAATTTTGCTCTACATCTAAGAAA
TCCTTGGTAGACAGAAACTACTAGTGTGTTATGGTGCACATGTATAAATT
TCCTTATTACTCAACTTTTCATCAATAACACACTAAATTTTAGCAAACTT
AACCAACATATTCATTTATTCATTACCAAACCCCTTCAATTGAAATGCTT
GCTTTCCATTGTTGTAAAAGAATCAATGACAATGGGATTTTAAAGCTCTT
TTCTCAAACACTTACACAAGTAGCTTTCTCTGTTATCCTATAAAACATAG
TGGAACTTCCCAGAAAAGAAGGCTGGCAGAAATTTAGTCTGAGAGAGGGA
AAACCATACTGATTAATAACTTGGCTAACAAAAAGAGAATTTAAGGAACA
TCAATTTCAGTATCGATGATCATTGCGTACAGCTAGTTTCCATTTCTAAT
CCTGTTTGAACAGGGGGCATGATAACAGACCCAAACCTGAAATGAAATAC
ATCCTGTTAAGACAGAGATGGGATCCCTTTTTTTACCTACCTTGGAAGTC
CATTAACCTTTGTTTGAATAAAAATTGGATTTTCTTATTGGGAAATTCCC
TTTATCATTTTTAGGGAAATGTGTTTTCTCTCTATTGGCTATGTTTACAA
TCTGTTGCCTGATTTTCAGACAGAGTAATAATTTTTTGGCCAAATTTGGG
CCAGAAAGTCAGATTTTTGTGTTTGGGGAAATTCCCTTGTCATTAATATT
TTTAGGGAAAATGGGCATTTCTTGTGATTGGTTTGGTATTTATTTATGTA
GATTTATTTATTTATTTTGTCTTGCTATTCTTTCCTATTTTCTTATTACA
TTAGCCTTCAGGTAGTTCAATATAGCATCTTGCTTGTTGATTTTAAGTTA
TTCCATGGACTTTTCAATTCATAAGTTATTTTAAAATTCATGTAAGGAAA
CAATTGACGGTTTCAAAAGAAATATATGTAAAGATGGCATGCTGTAAAGG
TACAGGAGTTGAAAAGCAAAAACAGGACATCTGATATTATGTCTCATATC
TCTGAAACCTGTAGATTTTATTTTGACAACTAGTTTTTGTGGGTTGGCTA
AAAACAACTTGACCTGTTATTTATATCTCTTGTACAGAACTGTTTTAAAT
ATTAAATAAAATGTCATTGCTAAATTTAAACTGATTACTTTTTAATTTGC
TGTTTAATTTAAAAATAAGCAAGTTGTACTTTTTGAGAGGTTTTAAATTA
AGAACTACTTTGATAGTGCAATCTCATTCTAAAGTCAAATTTTAGGTGTT
TTAGCGTAAATTTTAAAGAATCGTAACTCAGGAACTGAATGACAAATTTC
AAAAAAAATAGGGCAGAATGTTTTTTAATGATATGAACATAATATTCAAA
AAATTAGCAAAATCTGAGGATATTACTTTCTCAACCAGTCTGATTTTTAC
AGAAAAAGGTTTCTAAGTTTAAGTCCAAATCGCCGTGTCTTTAGAGGTTA
AGATGTGTTGGACTTAAGGCTACACATCTCATGTCAATGCTTCATAGAAA
ATAAAATTTGCACTAAAATTTAGGACTTAAGGCTGTTTATGGTTGATATA
TTATGGAACATTCTAAATTTTAAATTTTTTCTTGAATTGCAAAATACACC
TCTTTCCCATTAGAATTCTGTGGAATTAAGGTCGTTTTTGGAAAGTGTGC
ATGCTGAAATAGGGGGTTATGGTCTTAAGTCAATTTTCGAAAAAATGGAC
TTAAGTCTGTCTTGAATTGACACGACAAAATGTTTAGACTTTCAGAAAAA
ACAATTTAGTGAATCATTTAAGTATGCCACAAATAATGCTCTTTGAGAAA
GTAATGAAATAAGGGAATCAGTATAGTAATATTTTATCTTTCTAAGGTTT
GTGGTATTGTTGTGTTTGGTGTTGGAATTTACAGTCGTATCAAAGCTGGT
GACTGGAAAGATTTGGTTGAAGATGTCAGTGTTGTGGATGCTGCAAACCT
TCTCATTGCCTCTGGTGCCATTGTCATGGTTATTGGATTTGTTGGATGCT
GTGGAGCCTTGAAACAAAAAGGGGACGCTTTTGGTTATTGTAAGTGATTC
TTTATTTCTTAAATAAATTCTTAAAACTTGATGACTAGACTGTTAATCAT
CAACCATTGCTTCGTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGCG
AGGACGAAAAAATTGCGAAATTCACGACATTTACTTTCGCGAATTTAACG
GAAAAATATTTTTCGTGAGCATAAACTTTCGCGAATCAAGACGTAAAATT
GAGAATTTTCACATGAAAAAATCTTAGAGGGTCAAATACTTCTTGGATTG
GCTTGAAATATTTGTTTTTGACTTATTAGTATTTTAGCAGGCTAAAAAGT
GCCATAAAAGTTACATTTTATTCAAAGTTTGAAGTTTAACAGATTTTCTA
ATTTGTCAAGAGTTTTTCGCGAGCATAAACTTTCGCGAATGGCCCTTCCT
AGAATTTTTAAAGACATTTACTTTTGCGAAAAGGGCCAAAATTCGCAAAA
ATCGCGAAAGTTTCTGCTCGCAAAAGTTTCTACGCCTAAAGTATTCAATA
TTAAAAAAGAACAAAAGAAGCTCTGTTGGCAGGTAGCTTTAGCAATAAGC
AAAAAGCTCGTCCCAGCTGTTGAAAAAACTACTTAAAGCACTATAGCTCT
CACTCAACAAAATTGTGGATTTTAAAAATTAGATATTCAGAATCTATTAA
AAATTTCGCTTTCAATGATATATAACATCATGGGGTTTTGTGAATGTGCT
GGAAAGATATTGGTTCTTGAAAGGTCAATAAATGGCCCATTTTGGCCTAA
AATTTGATGAAACAATGAAAATCACAAATACGAATAATATATTATTCTCA
TCGTATTTCAACATATTGCCATCAAAACAATTATTAAATATTTCCCAAGG
CATTATTTTCAAAGATCAAAAATCANTGATATTCTTTATGTCTATATAAA
AATTTTTGACATTCTGAAAACTTCATTTTTTGCCATTTTTCAGATTTTTT
GGGACGAGCTTTTTGCTTATTGCTCTTTATTATGCTTTACTTTTAAATAC
TCTAGTACAAAACATAATTTNTGGACATTTTTGGAAAAAAATGAGAATGA
AACATTTTCGAAAAAAAATCTGTTAGTATTTTTCCCTTGGCTATTTCTAA
GGTATGACTAATTCTAAAATTAAATTTTAGCAGCTAAATAGTACCAGATG
ACTTGTTTGAACATANCTTTTGAATACTCTAGTACAAAACATAATTAAGA
ATTCTGTCACTTTGCTTTTCATTTCCTTGGTTTGTCAGGTTTTGTATTTG
ATTGCATTGTTTGATTTTAGTACATCATCCTTCTCATGCTTATCTTCATT
CTTGAAATCGCTGGAGGAATCTACGCTGCCGTTAAGAAAGATGATGTTCT
CAAATCCTTGAAAACGAACTTCCAACGATTAATGACTACATCTTATGGAC
AAACCGAAAACAACAAAGCAAACGAGGGATACACTAACTCCATTGACTGG
TTCCAAGAAAATGTAAGTATTGTCTTTGTTTTTGTCAGTTTTAGTGATTT
ATTATAATTAAGTGTTTGCAGGCATCTTATTACGACTTTATCCAGTGCTA
AGAATACATATATACTATTAATAATAGAAGATATACTATTAATAATAGAA
CTCCTTTTTGAAATTAGACAACCAGAGCTAAAAATTCTATATCAGAACTA
TAAACTAGGCTACCTCTTTTCTTTTTAACTTTACAGCAATAAAATACTGA
CAAGTTTAACACAAAACATTGACAAGTAATCTCTGGGACAATTGGTCGAA
ACATGGGACTATTGATATCTTGCCTGTATTTTCACTTACTGTTAAATCTC
TTTGACAACAAATTTGTTTGATAACTCCCAAGTTTAGCAATCATACTTTC
TGCTATAACATGTCACAATAACTTTCACTGGTAGCGCGCCCTTTTTAAAT
TTTTGTTTCAATTCAAAATGACCAGACGCCGATTAGAGAACGCCCAAACG
CCCAACCGCCTATCGCCTGATGGGATTAACAAATAAAGAGTGTAACTTGT
CGCGCGAGTGACTTCAAACGCTCAATTGTTTTGCCACTAGTATGGTCTTT
TTTGTTCCAGACATTCGCGTGTGTTCCACTACGGATTTTTTTCATGTTTC
GATTTAAAATCCTACTCGATGCGAAAGAGAAATTGTGTAATGTACTTTTT
AAATAAACCGTTCATTAAGTCAAATCAAATGACTTTGGAGGTTTGGTGAA
ATGTTGGCCGAATTGCCGTCCCATGTTTTGTCAGATGGTACCAAGTTAGA
GCAGTTGATGGTAAGGTACTTGCAGCCTTTCAGTGCCTTGCATGACGGGC
AGCTAAAATGTTGGCTTGAAATCTAAAATGAAACTACTGAAAACAAAAGT
AAAATCAGCCCACACCAAATCCCGTAATCTTGATATAGGAGTTTTAGTCT
TAACTGTTAGATATTATTACTTTTATTCCTATCTAGCAATTTAATTTCAA
TATTTCACAGGTCAAATGTTGTGGCTCCACCGGACCTAACTCATGGAAAA
ATACTACTTGGACTAACACCAACAGGGACAAGGCAGTTAACGGGTCAGAT
TACCAACTCTTCCCAAAATCATGCTGCAAATCTGGTGATTGTAACATGGG
AAATGGCTTCCCTGTTACTTCAAATGACAACATCTTCATGGATGTAAGTC
TAACAAATGATCTAAGATAAATGGAATATTATTTGGCATTCCATTTCATA
TCCATACAGGGAGATAGACTATCATTTCCAAGGGTAATTTTAGCAGAATT
TCCAGGGGTCTAAATGTGTTTTTCCCATTTTTCCAGGGGATAAATATTTT
TAAATTTCCATGGGGTAAAAGACTAATTTTAGTTTTTCCACCTCACTTTA
AGGTATGAAAAGAATATTTTTGCAAATTTTGCCACTTCCCGAGGTATTCA
CACATATCCAAGAAATATTTTTGAATTTAAGAGGTTCGTACAGGGGGTGG
CTGTATGGAAATTTAGTGGTTTGACCCATTGCTGGATGAATCCTTGAGCT
CTATGAGAGACGGGTAACTTTTTAATAATAACTAATTGTTTACATGTGGA
CTTGTTTTTAGACTCCTTGTTTAAAAATTGAAATGAGATGGATTGCTTAA
TTCGAAATCAGAATTTGGATATTAAAAAAAATCTATGATTCTCAAGGCAT
TTAAAACTGAAAAGCTTGAAATTCTTAAAAGTACATTTAAATGAAGAGGA
TCTTTAAATTCTTTTCCACTTTTTATAAAAAAATTGTTTTCATGACTATT
TATTTATCTTGTTTGGTGGTTTTGGATATTAGAAACTTTCCGTCAGATAT
TTCCGTTAAAACTGCATATGCATGCCTTTCCATAAGCTAATCATTTAGAG
AACTTATATAGGAACCCTAACAAGAGAATACTTAATATTTAATGAAAAAA
ATCTTTCTCCGTCCTATTTCTTTTGGATAATCCTTAATCATTTCCTTTCC
ACTTTCAAACATTGAAAATCGAGTGTCCGGACTGTATACTAATTTATTAA
AGGTTTTATTTTTACATAAGTGTTCCCGTTTCATATCAGGACAGTGTCTT
CCTATTGTTATTTGCTGATATAAGCAAAAAATGTTTTTCTTTTCCTCTTT
CTGACCAATCTTGCTCCACATCCGTGTCACTCCAATGTGAAAAAGCTTGT
AAATTAAAATTGAGTAAGCAAACGATAGATATCACTCTTATTTCACGTAA
AATAGTAGTAAGATGTGAATCAAAAACAGCACTTCTTATACCACTAATCA
TAACTTGAGATTCTCTTCTTTCTTTTCAGGGTTGCGTGANTATGATTCTC
AAGGCATTTAAAACTGAAAAGCTTGAAATTCTTAAAAGTACATTTAAATG
AAGAGGATCTTTAAATTCTTTTCCACTTTTTATAAAAAAACTGTTTTCAT
GACTATTTATTTATCTTGTTTGGTGGTTTTGGATATTAGAAACTTTCCGT
CAGATATTTCCGTTAAAACTGCATATGCATGCCTTTCCATAAGCTAATCA
TTTAGAGAACTTATATAGGAACCCTAACAAGAGAATACTTAATATTTAAT
GAAAAAAATCTTTCTCCGTCCTATTTCTTTTGGATAATCCTTAATCATTT
CCTTTCCACTTTCAAACATTGAAAATCGAGTGTCCGGACTGTATACTAAT
TTATTAAAGGTTTTATTTTTACATAAGTGTTCCCGTTTCATATCAGGACA
GTGTCTTCCTATTGTTATTTGCTGATATAAGCAAAAAATGTTTTTCTTTT
CCTCTTTCTGACCAATCTTGCTCCACATCCGTGTCACTCCAATGTGAAAA
AGCTTGTAAATTAAAATTGAGTAAGCAAACGATAGATATCACTCTTATTT
CACGTAAAATAGTAGTAAGATGTGAATCAAAAACAGCACTTCTTATACCA
CTAATCATAACTTGAGATTCTCTTCTTTCTTTTCAGGGTTGCGTGACAGA
AAGTGAACAGTTCTTGAACGATCACATGAAAGAATTGGTCGGTGTCGGTG
TCGGTATCGCTTTTATTCAAATCATCGGTATCGTGTTCGCCATCTTATTG
TGCAAAAAAATCGGAGTAGAATCTGTCTAAAGATTTCGACCACCAAGAAC
ACATACACATTAAACTTCTTGATCATAAATCAAAATTTTTGTCTTAAGTA
TTTTTTTTTGTTAAGTATTTATTTTATCAACCACAGTCAGGTGTATTAAA
CTGAATTTTGTATCGATTTCTTGTCAGTCTTTTTTATTTTAGGGTTAGCT
CTTCCTTTTTTGGGTGATTTCTTTGTCACATTTTGTTTAATATTTTTACT
TTTTTATATTAATCGATGTTGTTTTAACACTTTGTATATTCAAATTGACA
GGAACTAACTGTGCGTGAAAGAATGTAATTAATCTTACTTAGCTGATGTA
AAATCACTTTGTGTTTAGGCTGCACACATCCCTTCTGGTATGTTTGATAT
AGGGGATGCGTATCGTGTGTCTGATTCCCGTCGTAGAACTTTCTTTAAAA
GCTTTAGAAATTCAATGATTGTGGTTACTAATCATGTCTCTAAAACTTAA
AAACACACAGACGGGTCAACTCTCGGACGGGAATTAGATACACGGTACGT
AAATCCCATATATTAAAACATATCAGGAAATGTGTGCAACCTCTTGTGTT
AGACGTTCCATGACCACGAAGGATATCCAAGTTATCCCAGCTAGCGAACG
TGAACGTTGTTTCAAAATATTAATGAAATTAAGACCTTGCTGTTTTCAAA
TCTGTGTTCTGACCTCTCATATTTCTTAGATAAAAGTTAGGTTGTTTTAG
GCTGTGACTTTTATAGGGAATACC

Coding sequence (CDS) from alignment at scaffold_71:1182457..1191330-

>TCONS_00072219 ID=TCONS_00072219|Name=TCONS_00072219|organism=Clytia hemisphaerica|type=CDS|length=1512bp|location=Sequence derived from alignment at scaffold_71:1182457..1191330- (Clytia hemisphaerica)
GGTTGCGTGACAGAAAGTGAACAGTTCTTGAACGATCACATGAAAGAATT
GGTCGGTGTCGGTGTCGGTATCGCTTTTATTCAAATCATCGGTATCGTGT
TCGCCATCTTATTGTGCAAAAAAATCGGAGTAGAATCTGTCTAAGTCAAA
TGTTGTGGCTCCACCGGACCTAACTCATGGAAAAATACTACTTGGACTAA
CACCAACAGGGACAAGGCAGTTAACGGGTCAGATTACCAACTCTTCCCAA
AATCATGCTGCAAATCTGGTGATTGTAACATGGGAAATGGCTTCCCTGTT
ACTTCAAATGACAACATCTTCATGGATATGCTTATCTTCATTCTTGAAAT
CGCTGGAGGAATCTACGCTGCCGTTAAGAAAGATGATGTTCTCAAATCCT
TGAAAACGAACTTCCAACGATTAATGACTACATCTTATGGACAAACCGAA
AACAACAAAGCAAACGAGGGATACACTAACTCCATTGACTGGTTCCAAGA
AAATGGTTGCGTGACAGAAAGTGAACAGTTCTTGAACGATCACATGAAAG
AATTGGTCGGTGTCGGTGTCGGTATCGCTTTTATTCAAATCATCGGTATC
GTGTTCGCCATCTTATTGTGCAAAAAAATCGGAGTAGAATCTGTCTAAGT
CAAATGTTGTGGCTCCACCGGACCTAACTCATGGAAAAATACTACTTGGA
CTAACACCAACAGGGACAAGGCAGTTAACGGGTCAGATTACCAACTCTTC
CCAAAATCATGCTGCAAATCTGGTGATTGTAACATGGGAAATGGCTTCCC
TGTTACTTCAAATGACAACATCTTCATGGATATGCTTATCTTCATTCTTG
AAATCGCTGGAGGAATCTACGCTGCCGTTAAGAAAGATGATGTTCTCAAA
TCCTTGAAAACGAACTTCCAACGATTAATGACTACATCTTATGGACAAAC
CGAAAACAACAAAGCAAACGAGGGATACACTAACTCCATTGACTGGTTCC
AAGAAAATGGTTGCGTGACAGAAAGTGAACAGTTCTTGAACGATCACATG
AAAGAATTGGTCGGTGTCGGTGTCGGTATCGCTTTTATTCAAATCATCGG
TATCGTGTTCGCCATCTTATTGTGCAAAAAAATCGGAGTAGAATCTGTCT
AAGTCAAATGTTGTGGCTCCACCGGACCTAACTCATGGAAAAATACTACT
TGGACTAACACCAACAGGGACAAGGCAGTTAACGGGTCAGATTACCAACT
CTTCCCAAAATCATGCTGCAAATCTGGTGATTGTAACATGGGAAATGGCT
TCCCTGTTACTTCAAATGACAACATCTTCATGGATATGCTTATCTTCATT
CTTGAAATCGCTGGAGGAATCTACGCTGCCGTTAAGAAAGATGATGTTCT
CAAATCCTTGAAAACGAACTTCCAACGATTAATGACTACATCTTATGGAC
AAACCGAAAACAACAAAGCAAACGAGGGATACACTAACTCCATTGACTGG
TTCCAAGAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044838XLOC_044838Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072219-proteinTCONS_00072219-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072219-exon-scaffold_71-1575043694:1191185..1191330TCONS_00072219-exon-scaffold_71-1575043694:1191185..1191330Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1575043694:1190826..1190907TCONS_00072219-exon-scaffold_71-1575043694:1190826..1190907Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1575043694:1187792..1187984TCONS_00072219-exon-scaffold_71-1575043694:1187792..1187984Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1575043694:1186319..1186510TCONS_00072219-exon-scaffold_71-1575043694:1186319..1186510Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1575043694:1185138..1185320TCONS_00072219-exon-scaffold_71-1575043694:1185138..1185320Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1575043694:1182457..1183344TCONS_00072219-exon-scaffold_71-1575043694:1182457..1183344Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1510915933:1191185..1191330TCONS_00072219-exon-scaffold_71-1510915933:1191185..1191330Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1510915933:1190826..1190907TCONS_00072219-exon-scaffold_71-1510915933:1190826..1190907Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1510915933:1187792..1187984TCONS_00072219-exon-scaffold_71-1510915933:1187792..1187984Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1510915933:1186319..1186510TCONS_00072219-exon-scaffold_71-1510915933:1186319..1186510Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1510915933:1185138..1185320TCONS_00072219-exon-scaffold_71-1510915933:1185138..1185320Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1510915933:1182457..1183344TCONS_00072219-exon-scaffold_71-1510915933:1182457..1183344Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1491911889:1191185..1191330TCONS_00072219-exon-scaffold_71-1491911889:1191185..1191330Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1491911889:1190826..1190907TCONS_00072219-exon-scaffold_71-1491911889:1190826..1190907Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1491911889:1187792..1187984TCONS_00072219-exon-scaffold_71-1491911889:1187792..1187984Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1491911889:1186319..1186510TCONS_00072219-exon-scaffold_71-1491911889:1186319..1186510Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1491911889:1185138..1185320TCONS_00072219-exon-scaffold_71-1491911889:1185138..1185320Clytia hemisphaericaexon
TCONS_00072219-exon-scaffold_71-1491911889:1182457..1183344TCONS_00072219-exon-scaffold_71-1491911889:1182457..1183344Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:1182457..1191330 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1434.58	1418.8	1891.2	1911.08	1332.94	988.8	1009.41	1050.31	1163.08	1188.48	1039.31	852.703	497.344	464.829	267.832	286.76	393.424	534.204	427.327	460.284	383.138	378.155	584.382	529.722	225.105	217.879	331.961	286.534	373.804	402.012
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008952Tetraspanin_EC2
IPR018499Tetraspanin/Peripherin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
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BLAST of TCONS_00072219 vs. Swiss-Prot (Human)
Match: CD151 (CD151 antigen OS=Homo sapiens GN=CD151 PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 6.215e-24
Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 1 
Query:  151 KMGQTDLTCGMSCLKYLLFVVNFIVWVCGIVVFGVGIYSRIKAGDWKDLVEDVSVVDAANLLIASGAIVMVIGFVGCCGALKQKGD 408
            +  +   TCG  CLKYLLF  N   W+ G+ V  VGI++     D+  L+   + +  A +L+ +G +VMV G +GCC   K++ +
Sbjct:    3 EFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLATAYILVVAGTVVMVTGVLGCCATFKERRN 88

HSP 2 Score: 63.929 bits (154), Expect = 6.215e-24
Identity = 46/156 (29.49%), Postives = 75/156 (48.08%), Query Frame = 2 
Query:  464 GGIYAAVKKDDVLKSLKTNFQRLMTTSYGQTENNKANEGYTNSIDWFQENVKCCGSTGPXXXXXXXXXXXXRDKAVNGSDYQLFPKSCCKSGDCNMGNGFPVTSNDNIFMDGCVTESEQFLNDHMKELVGVGVGIAFIQIIGIVFAILLCKKIGVE 931
             GI A      +   LK N +  MT  Y Q      +E  T+++D  Q+   CCGS     W+++ W    R +   G   ++ P SCCK+     G      SN      GC+T+ E F+ +H++ +  VG+GIA +Q+ G++F   L + + +E
Sbjct:  107 AGILAYAYYQQLNTELKENLKDTMTKRYHQ----PGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWI---RSQEAGG---RVVPDSCCKTVVALCGQR-DHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGMIFTCCLYRSLKLE 251
The following BLAST results are available for this feature:
BLAST of TCONS_00072219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CD1516.215e-2434.88CD151 antigen OS=Homo sapiens GN=CD151 PE=1 SV=3[more]
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