TCONS_00067022 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067022
Unique NameTCONS_00067022
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1399

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067022 ID=TCONS_00067022|Name=TCONS_00067022|organism=Clytia hemisphaerica|type=transcript|length=1399bp
ACTGGGAAAGGTTGAAGGCAGCAGATCTCATACCTTAAATCTACCTTGGA
GACATCCGGCAGTACAAGCCGCAATTTCCAGACACAGTGCTGCATTGTCC
TGTTGTCCAGTGCAGTTTAGTCCATTTAGTCCAGCATCTCCAGCATCAcg
agattttttgttttaatctaTCATCAAAATGATCCGGGCAATATTAGATA
GCTAAAAAATCTACTGactttttcaattaaaaagatCGAAATTGAACAAG
GGTTAGCTTTCCGATATGAAAATATTCCAGTGATAAAGAGAGTTCACCGC
CTAGGTTGTGCTACTTTCCGGATCAGATTTAAAGGACCGGATCGCAATTT
TTTGTTATAGTCCACGGAACGCGCCGTAACTTTCCTTCAAGACttcatat
caaaatcaaaatgGCCAAGCGCACCAAAAAGGTTGGCATTACTGGTAAAT
ATGGTACCAGATATGGTGCTTCACTCAGAAAGATGGCCAAGAAAATCGAA
GTCAGTCAACATGCCAAATATACCTGCAACTTCTGTGGaaagGATTCCTT
GAAAAGAGATGCTGTGGGCATCTGGAAATGTAAAGGATGCAGAAAAACTA
TTGCTGGTGGAGCATGGGCACCAAACACATCCGCAGCTGTTACAGTCAGA
AGTGCTATCCGTCGTCTACGTGAATTACAAGAAATATAAATTTCGATCAT
TTACAATAACATTTGTGTCATTTATATCGACTTCTCTACTCCTGATACTA
TCACGTAGATACTGTTgagcttaaccctattcatcATACTAGACTTTTTG
TAacccaccccttaacttttgaactagttggtctttttggatgaaatttg
tgaggtagattcgctggagttaggtattcggtagtcgggattcgaaaaag
ctcaataaaaacttaacgaaaaaagatattaacttgaaataaaaaacgga
tgcaagcacacatactaaggaataaatcccaataaaaaaaattcagaatg
tgagctcagttgtcacgtgactatgggaaattcccctattcgggattcaa
atcatGTCAGGGACCTTTCTTCAAAAACTCGCCAGTCATCAAGGAAtagt
tggattgacttcaaataaaaaacggatgcaagttcacatgtcaaggaaaa
tattccaaacaaaaaaattcagaatatgagcttagttgtcacgtgactat
gggaaattcccctatttgggagttatttcaatttagagaccatttttaaa
aagcttaccagtcataaggaaatggttggattgacttcaaataacaaacg
gatgcaagttcacatgtcaagaaaaacattccaaaaaagaaaattcagaa
tatgagcttagttgtcacgtgactatgggaaattccccttttcaagagt
Run BLAST on NCBI

transcript from alignment at scaffold_462:907496..916048-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067022 ID=TCONS_00067022|Name=TCONS_00067022|organism=Clytia hemisphaerica|type=transcript|length=8553bp|location=Sequence derived from alignment at scaffold_462:907496..916048- (Clytia hemisphaerica)
ACTGGGAAAGGTTGAAGGCAGCAGATCTCATACCTTAAATCTACCTTGGA GACATCCGGCAGTACAAGCCGCAATTTCCAGACACAGTGCTGCATTGTCC TGTTGTCCAGTGCAGTTTAGTCCATTTAGTCCAGCATCTCCAGCATCACG AGATTTTTTGTTTTAATCTATCATCAAAATGATCCGGGCAATATTAGATA GCTAAAAAATCTACTGACTTTTTCAATTAAAAAGATCGAAATTGAACAAG GGTTAGCTTTCCGATATGAAAATATTCCAGTGATAAAGAGAGTTCACCGC CTAGGTTGTGCTACTTTCCGGATCAGATTTAAAGGACCGGATCGCAATTT TTTGTTATAGTCCACGGAACGCGCCGTAACTTTCCTTCAAGACTTCATAT CAAAATCAAAATGGTGGGTGAAGACATATTTACAAATCCAAATCTCATGA AAATCTACTAGAATCTCGACGATCGTGTATTTGTTTTGCTCACTGAGGCT GGTTTGGCAGCAACTGACCTTTATTTAACCTTTTTCTGAGGAAAGTTTTC TATATCATTTATGAGTAGTTGTTTTTATTGGAGGATGAGCTCACGGATTT TTCGATTTTTTTACAGGCCAAGCGCACCAAAAAGGTTGGCATTACTGGTA AATATGGTACCAGATATGGTGCTTCACTCAGAAAGATGGCCAAGAAAATC GAAGTCAGTCAACATGCCAAATATACCTGCAACTTCTGTGGAAAGGTATA TCATCAAAATTATAATGATAAGGCCACAATCACATATAACTTGTGTTCGC TTTGTTTTTAGTTGGAAAAAAATTAGCTGGTCAGTCAACAAAAAATTTCA AAATAAGCTTTGAAAACCTATCAGGACCAATTTTGTTTTAATTGGATTTG GACAGTTTAAGTTTGCATTTGGCTAAAGCTTCAGATGCATCCGGCTGGAC TTAGAATTTTTTTCAAGTTGAATAGTGACCAAAGGGGGTCTCGAACCGGG AACCTATAGGTTCCGAAANNCGTTATTTGGGGTTACTTATACGAAGGTCT TAGTACTATATATAAATAAGTCTGACTGACGAGTTAGGCTAACTGTTATG ATCGCCATTACTCCGAAGAATCCACCACACGTGTGCACCGCCGACCGGGT GAGGTAACCCTATACTACGCGCTCCGTGTGGTATATGCGTGCGGCCCGCA CAGCCGGATGCATCTGAAGCATTAGCCGAATCTGTTTGTTTAAGGTGACA AGTCCAGAAGCCGAATCCATAAGTTACCTCCACATCCCCAACCATGATAG GGTGACCACCCCAGACCACCCACCTATGTCTTCATTTTTCCTTGTATATC GCGTGTAATAATCACTTGTGGTTTTAGTTAACACATGTGCATTGTATGTG ATGTAGAACATTTATATTAGCATTACGCAATGGTTTTTTCCAAATATGGT AATACAAGATTTCGCATTGAACTGACCACGTGCATTTGCGTAGGGTAAAA TGGCGAAATGCGAAAATCGATTTTGGCAAAATTTTTTTGAAAAATGACCC TACAAGATTTGACTATCTTTTTATTCCATGAAGAGATTACTTTCAAATAA AAATATATTGACAATGAATGGGTAAGCAGCTTTCTAGAAATCCAAACATA AGTTGCATAGCTTTTCACTTCAGGATTAAAAACAGTCAAAAACCAGCTTT TTCCAATTTTCTTCGAGTTACAGGAATTAATTCCTTGTTTGTTTTGATCT GAAATTTTCAGTAGGGTAGGACAACATGGTTCCCTTGCTCATATCAGGGG GGGGTGAGACGGGGGTAAGAGAATTAAAGTTTCTAAGTAAAATCTTAATT ATCACCCAAAAAAGTGCCTTTTTTTGTCCATATCTTTTAAATAGATTGTC CCAGCCTTATCCCTCTTTCAGTAAAGCTTCCTATACATTTTGTCCTTCAG AAAAACCAAAAATATTGGCCTTAATTGCTTGCTTTCAGTTCCTGTAGCCA GTAGTGTGACCACCTGTATTTCTATTTTAATTCGCGCGGCTATTGTCAAA ATATCTTTCAAACCAGACTCTTCCACTCAATATAAATAATAACTTTTCAT CAATGACCAAATGATAATCAATAGGTGGACTGTATAATGAGGAATCTAAT AATCGATAGACAGTCATAATGAGGATCTTAGGGGTCTTGGCAAAAACCTT TCAAATTTCTTGTTGGTGTTAGGCTGATAAGGGGAGCAGTCGGGTGTTTA AGATAAAAACTGCAATTATTGCTCTTTACGGAAATTATTGCCGAAAACGG CAATTTTTTCAACGATGAAATGCTGAATCAGCAGAANNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTCTTTCTGGCTGTGTTTC GGCATCGATGCAGGATCTTTTAACATATTATTTTAGAACTTTTCATGTTA TTGAGCAACGAAAAATCGAAAAAATCACTTTTATAAACCCGAAAAACCTT TTTCTCGATGCAATTTTACAATTTTCAAACACCTCTGACATCTTTGCCCT TAAAAGGACAACACATTTTGCTGATTCAGCATTTNNNNNNNNNNNNNNNN TTTGCTGATTCAGCATTTCATCGTTTAAAAAATTGCCGTTTTCGGCAATA ATTTCCGAAAAGAGCAATAATTGCAGTTTTTATCTTAAACACCCGACTGG GGAGAGGGGATTCGACTACATAACAATAAAAAGTAAGTTTTGAAAGGAAA ATCGTAATTTTACATGTTCATTTCAACTGATTTTCAATCATTTCTCACTA GGATTCCTTGAAAAGAGATGCTGTGGGCATCTGGAAATGTAAAGGATGCA GAAAAACTATTGCTGGTGGAGCATGGGCACCAAAGTATGTATTTATTTTA TTCATTTTTCAACCTAAAACATCAAAGAAATATTTTGAACATAATACACA TGTTCCTATTTTGGTAACTTTGAGAAAATTGCAATTAAAGTTTTCCCTTG ATTCCGAAACCATTTTTAATGGCTTTGAAGTTAATGTTTTCTGAAAGCTG TATATTTGTTGTTTTTTTGGACCTACCCCGGTGGGCTGTAGGTCCTATAA ATTAACCTCTGTTCGTTCGTTCATTCGTCCGTTCGTCCGTTCGTTACCAG CTTTTCTCGGGATTGGCTCATTAGTTTTTCCTAATTTTTGGCACAAAGAT GCAAAATGGTAATGCCCAAAATGTAACGGAGCCCGATTTTCGAAAAAAAT TCATTTCCAGCCGAAAATGCCGGAAATATGCCGAAAACCGGTTTTTTGGC ATTTTCTCGAGATTTCATCATTAGTTTTTTCTAATTTTTTGCACAAAGAT GCGTATTAGCAATGCCTAAAACATGGATTAGTCATATTTTTGAGAAAAAT TCTATTCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGC AGATTTTCATTGGACTTTTTCCTTATATTTCGTTGTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TTTTCGCTAAACGATATATTTTCTGACTGATTTTTTTCTCCTCGCATTGC TATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTT CAATAAAAAGGCATTCTTTTGGAAAGTAGATATGTTTGTACATAACAGGT GCAACTTAGTAAGAGTGGACTTAAGCCTTTTTTTAATTGAACATGAATTT TGAAAAATGTTTGAGGGTTAATTTCTCCCTTTTAAAGCTAAAAACCTGCA CACGACACTCTGAAATAAAGTCACTTCATAGTGCGGAAAGGGGTCTGATC CCCCCCTTGTTAAATGATCCCCCTTCTTGGCATCCCCCAACCTTTAAAAA TGGTTATCCCCCATGGGTTTTGGGCTAAATTTTCGAAAATATATACTGTA TAGTGTGATCCGATAATCCCTTCTTGCTGCTACCCATCCCCTTATAATTA AAAAAAAATGGCAAACTTCTTTCTTGCTTCTTGTTGACTCAGACTACCCA AACAGAAAAACATCCTTTCATGCAGACCAGATTTCATAACAGTGCTGGAA AATAATCTACAATATATGTAAGCCCCCCCCCTTCCTTGCTATCCCCCCTT TTTTCATGAAAATTTCTGATCCTCCTCCTTCTTCGTTTTTTCGGAAGGTG TCACCCCCTTAACTATGTACCTTAACTATGTAAACTCAAATAAACCAAAA ATCAATATCACCACTCTCTATCGGTATTATAATGAAATTAGCAAATATAA AAAGGATTTCCAGNGCGAACTATGCACTTACACCTAGATTCAAGATAAAG AGAAAGGACAATATCAGTAAAATAAAGAAAAACTTATTTAAATATTTTGG TGGACTTCTTCCCTTTTATAATAAAAAGATAGACTTGGGCCTTTCTATTA TATATAGCAGAGCTTCACTGTGAAGTTTTGGGCCTAACTTTAAGAACTAC TTGTTATGTACATTAAAAAAGAGACAATTGGCCAGAGATTGACAAAAACT AAAGATTTCAAAATTCATAAAAACGGACCTAAGTCCCTTTTGAACTAGGG GGTAGCCGGACTTGGCCTCTTTGGAATTAAGGTAGTGAGTCATGTTTTAT AAGAACCACTGTTATTATTTGTTAATGACTTTCAGGCTAATTGATATCAA TATGATTAACTTAAACTTGCAGATGGATGAATCGTTTGCCTTTTTTGCAG TGTATGCTAAGCTTTGAAGGCAGAAAGTTTTGTGGAGGAAAAGCCGTGAA ATTTCTTAAGTTAACAAAACTTTTGGAAAAATTTCCATTTTTTGAAAATC TTTTTTTAATGGAAATAACTTTCGCAAATGGCTCAAAATGTTTTTCTACA ATCCCTAAGGAAGAAATATTGATAGCCGTTTGTCATAAGCCTTTTTATCT TCTTTTTTTTTTTTGCTTTTAATTAACTGAGAGGAAAAAACCATTTTTTC CGCTTACTTTCTTACATCGACCAGCTAGCGTTAACTTTGGCAAAAAAGGC GAAACTCTCTGCCCTAAAGTATCTTATCGGCCCTTTTTACACCGGCCTTT GGCGTTATTTTTGGGCACGTGGCGTAATAAGGGCCGGTGTAAAAAGGGGC CAAGATTTTGAAATTTTTATCTAAAAGTGGCGTTAATTTTCGATCATTGT TTCTCAATTTAAAGGATTTTAGGTATAATTCGAAGACAAAAATTATCCAT TCTTTTACTTCATATCTAGGGCCTTACGAAAATCAGTGATTTTGAATGGA ATTTTCAACAATTTACTACTGAAACATGACATTTTAATGAAAATTTTAAT GATTATTTACAAATTTGAAGCATAAGTAGCCATTTTTACAAATTTTGGCG TTATTTTAACGGCCCTTATTGGCGTAAGCCCAAAATTAGGCTGTGGCGTA ATAAGAGCCGGCGTAAAAAGGGCCTATAAGGTACTTAATATTCGATTTTT TTCTCAAAGCTAATCAACACCAATTTTTCACATCGTTCTGACCCAGTAAA ATATCAAATCTTTTCTTCTTGTTTTATAGCACATCCGCAGCTGTTACAGT CAGAAGTGCTATCCGTCGTCTACGTGAATTACAAGAAATATAAATTTCGA TCATTTACAATAACATTTGTGTCATTTATATCGACTTCTCTACTCCTGAT ACTATCACGTAGATACTGTTGAGCTTAACCCTATTCATCATACTAGACTT TTTGTAACCCACCCCTTAACTTTTGAACTAGTTGGTCTTTTTGGATGAAA TTTGTGAGGTAGATTCGCTGGAGTTAGGTATTCGGTAGTCGGGATTCGAA AAAGCTCAATAAAAACTTAACGAAAAAAGATATTAACTTGAAATAAAAAA CGGATGCAAGCACACATACTAAGGAATAAATCCCAATAAAAAAAATTCAG AATGTGAGCTCAGTTGTCACGTGACTATGGGAAATTCCCCTATTCGGGAT TCAAATCATGTCAGGGACCTTTCTTCAAAAACTCGCCAGTCATCAAGGAA TAGTTGGATTGACTTCAAATAAAAAACGGATGCAAGTTCACATGTCAAGG AAAATATTCCAAACAAAAAAATTCAGAATATGAGCTTAGTTGTCACGTGA CTATGGGAAATTCCCCTATTTGGGAGTTATTTCAATTTAGAGACCATTTT TAAAAAGCTTACCAGTCATAAGGAAATGGTTGGATTGACTTCAAATAACA AACGGATGCAAGTTCACATGTCAAGAAAAACATTCCAAAAAAGAAAATTC AGAATATGAGCTTAGTTGTCACGTGACTATGGGAAATTCCCCTTTTCAAG AGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041862XLOC_041862Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067022-exon-scaffold_462-1575043694:915636..916048TCONS_00067022-exon-scaffold_462-1575043694:915636..916048Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1575043694:915304..915432TCONS_00067022-exon-scaffold_462-1575043694:915304..915432Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1575043694:912015..912097TCONS_00067022-exon-scaffold_462-1575043694:912015..912097Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1575043694:907496..908269TCONS_00067022-exon-scaffold_462-1575043694:907496..908269Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1510915933:915636..916048TCONS_00067022-exon-scaffold_462-1510915933:915636..916048Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1510915933:915304..915432TCONS_00067022-exon-scaffold_462-1510915933:915304..915432Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1510915933:912015..912097TCONS_00067022-exon-scaffold_462-1510915933:912015..912097Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1510915933:907496..908269TCONS_00067022-exon-scaffold_462-1510915933:907496..908269Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1491911889:915636..916048TCONS_00067022-exon-scaffold_462-1491911889:915636..916048Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1491911889:915304..915432TCONS_00067022-exon-scaffold_462-1491911889:915304..915432Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1491911889:912015..912097TCONS_00067022-exon-scaffold_462-1491911889:912015..912097Clytia hemisphaericaexon
TCONS_00067022-exon-scaffold_462-1491911889:907496..908269TCONS_00067022-exon-scaffold_462-1491911889:907496..908269Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:907496..916048 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
429.182 422.843 493.508 595.087 61.9293 47.7988 57.3686 58.266 604.446 496.691 623.462 814.47 816.268 872.667 769.151 719.682 874.736 833.975 505.963 503.002 801.152 770.055 616.441 582.115 122.852 118.881 690.287 738.269 530.634 545.343
Blast
BLAST of TCONS_00067022 vs. Swiss-Prot (Human)
Match: RL37A (60S ribosomal protein L37a OS=Homo sapiens GN=RPL37A PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 2.810e-42
Identity = 70/91 (76.92%), Postives = 80/91 (87.91%), Query Frame = 3
Query:  411 MAKRTKKVGITGKYGTRYGASLRKMAKKIEVSQHAKYTCNFCGKDSLKRDAVGIWKCKGCRKTIAGGAWAPNTSAAVTVRSAIRRLRELQE 683
            MAKRTKKVGI GKYGTRYGASLRKM KKIE+SQHAKYTC+FCGK  +KR AVGIW C  C KT+AGGAW  NT++AVTV+SAIRRL+EL++
Sbjct:    1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91          
The following BLAST results are available for this feature:
BLAST of TCONS_00067022 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RL37A2.810e-4276.9260S ribosomal protein L37a OS=Homo sapiens GN=RPL3... [more]
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