XLOC_041862 (gene) - C. hemisphaerica

Overview
NameXLOC_041862
Unique NameXLOC_041862
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_462:907496..916048-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041862 ID=XLOC_041862|Name=XLOC_041862|organism=Clytia hemisphaerica|type=gene|length=8553bp|location=Sequence derived from alignment at scaffold_462:907496..916048- (Clytia hemisphaerica)
ACTGGGAAAGGTTGAAGGCAGCAGATCTCATACCTTAAATCTACCTTGGA
GACATCCGGCAGTACAAGCCGCAATTTCCAGACACAGTGCTGCATTGTCC
TGTTGTCCAGTGCAGTTTAGTCCATTTAGTCCAGCATCTCCAGCATCACG
AGATTTTTTGTTTTAATCTATCATCAAAATGATCCGGGCAATATTAGATA
GCTAAAAAATCTACTGACTTTTTCAATTAAAAAGATCGAAATTGAACAAG
GGTTAGCTTTCCGATATGAAAATATTCCAGTGATAAAGAGAGTTCACCGC
CTAGGTTGTGCTACTTTCCGGATCAGATTTAAAGGACCGGATCGCAATTT
TTTGTTATAGTCCACGGAACGCGCCGTAACTTTCCTTCAAGACTTCATAT
CAAAATCAAAATGGTGGGTGAAGACATATTTACAAATCCAAATCTCATGA
AAATCTACTAGAATCTCGACGATCGTGTATTTGTTTTGCTCACTGAGGCT
GGTTTGGCAGCAACTGACCTTTATTTAACCTTTTTCTGAGGAAAGTTTTC
TATATCATTTATGAGTAGTTGTTTTTATTGGAGGATGAGCTCACGGATTT
TTCGATTTTTTTACAGGCCAAGCGCACCAAAAAGGTTGGCATTACTGGTA
AATATGGTACCAGATATGGTGCTTCACTCAGAAAGATGGCCAAGAAAATC
GAAGTCAGTCAACATGCCAAATATACCTGCAACTTCTGTGGAAAGGTATA
TCATCAAAATTATAATGATAAGGCCACAATCACATATAACTTGTGTTCGC
TTTGTTTTTAGTTGGAAAAAAATTAGCTGGTCAGTCAACAAAAAATTTCA
AAATAAGCTTTGAAAACCTATCAGGACCAATTTTGTTTTAATTGGATTTG
GACAGTTTAAGTTTGCATTTGGCTAAAGCTTCAGATGCATCCGGCTGGAC
TTAGAATTTTTTTCAAGTTGAATAGTGACCAAAGGGGGTCTCGAACCGGG
AACCTATAGGTTCCGAAANNCGTTATTTGGGGTTACTTATACGAAGGTCT
TAGTACTATATATAAATAAGTCTGACTGACGAGTTAGGCTAACTGTTATG
ATCGCCATTACTCCGAAGAATCCACCACACGTGTGCACCGCCGACCGGGT
GAGGTAACCCTATACTACGCGCTCCGTGTGGTATATGCGTGCGGCCCGCA
CAGCCGGATGCATCTGAAGCATTAGCCGAATCTGTTTGTTTAAGGTGACA
AGTCCAGAAGCCGAATCCATAAGTTACCTCCACATCCCCAACCATGATAG
GGTGACCACCCCAGACCACCCACCTATGTCTTCATTTTTCCTTGTATATC
GCGTGTAATAATCACTTGTGGTTTTAGTTAACACATGTGCATTGTATGTG
ATGTAGAACATTTATATTAGCATTACGCAATGGTTTTTTCCAAATATGGT
AATACAAGATTTCGCATTGAACTGACCACGTGCATTTGCGTAGGGTAAAA
TGGCGAAATGCGAAAATCGATTTTGGCAAAATTTTTTTGAAAAATGACCC
TACAAGATTTGACTATCTTTTTATTCCATGAAGAGATTACTTTCAAATAA
AAATATATTGACAATGAATGGGTAAGCAGCTTTCTAGAAATCCAAACATA
AGTTGCATAGCTTTTCACTTCAGGATTAAAAACAGTCAAAAACCAGCTTT
TTCCAATTTTCTTCGAGTTACAGGAATTAATTCCTTGTTTGTTTTGATCT
GAAATTTTCAGTAGGGTAGGACAACATGGTTCCCTTGCTCATATCAGGGG
GGGGTGAGACGGGGGTAAGAGAATTAAAGTTTCTAAGTAAAATCTTAATT
ATCACCCAAAAAAGTGCCTTTTTTTGTCCATATCTTTTAAATAGATTGTC
CCAGCCTTATCCCTCTTTCAGTAAAGCTTCCTATACATTTTGTCCTTCAG
AAAAACCAAAAATATTGGCCTTAATTGCTTGCTTTCAGTTCCTGTAGCCA
GTAGTGTGACCACCTGTATTTCTATTTTAATTCGCGCGGCTATTGTCAAA
ATATCTTTCAAACCAGACTCTTCCACTCAATATAAATAATAACTTTTCAT
CAATGACCAAATGATAATCAATAGGTGGACTGTATAATGAGGAATCTAAT
AATCGATAGACAGTCATAATGAGGATCTTAGGGGTCTTGGCAAAAACCTT
TCAAATTTCTTGTTGGTGTTAGGCTGATAAGGGGAGCAGTCGGGTGTTTA
AGATAAAAACTGCAATTATTGCTCTTTACGGAAATTATTGCCGAAAACGG
CAATTTTTTCAACGATGAAATGCTGAATCAGCAGAANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTCTTTCTGGCTGTGTTTC
GGCATCGATGCAGGATCTTTTAACATATTATTTTAGAACTTTTCATGTTA
TTGAGCAACGAAAAATCGAAAAAATCACTTTTATAAACCCGAAAAACCTT
TTTCTCGATGCAATTTTACAATTTTCAAACACCTCTGACATCTTTGCCCT
TAAAAGGACAACACATTTTGCTGATTCAGCATTTNNNNNNNNNNNNNNNN
TTTGCTGATTCAGCATTTCATCGTTTAAAAAATTGCCGTTTTCGGCAATA
ATTTCCGAAAAGAGCAATAATTGCAGTTTTTATCTTAAACACCCGACTGG
GGAGAGGGGATTCGACTACATAACAATAAAAAGTAAGTTTTGAAAGGAAA
ATCGTAATTTTACATGTTCATTTCAACTGATTTTCAATCATTTCTCACTA
GGATTCCTTGAAAAGAGATGCTGTGGGCATCTGGAAATGTAAAGGATGCA
GAAAAACTATTGCTGGTGGAGCATGGGCACCAAAGTATGTATTTATTTTA
TTCATTTTTCAACCTAAAACATCAAAGAAATATTTTGAACATAATACACA
TGTTCCTATTTTGGTAACTTTGAGAAAATTGCAATTAAAGTTTTCCCTTG
ATTCCGAAACCATTTTTAATGGCTTTGAAGTTAATGTTTTCTGAAAGCTG
TATATTTGTTGTTTTTTTGGACCTACCCCGGTGGGCTGTAGGTCCTATAA
ATTAACCTCTGTTCGTTCGTTCATTCGTCCGTTCGTCCGTTCGTTACCAG
CTTTTCTCGGGATTGGCTCATTAGTTTTTCCTAATTTTTGGCACAAAGAT
GCAAAATGGTAATGCCCAAAATGTAACGGAGCCCGATTTTCGAAAAAAAT
TCATTTCCAGCCGAAAATGCCGGAAATATGCCGAAAACCGGTTTTTTGGC
ATTTTCTCGAGATTTCATCATTAGTTTTTTCTAATTTTTTGCACAAAGAT
GCGTATTAGCAATGCCTAAAACATGGATTAGTCATATTTTTGAGAAAAAT
TCTATTCCGGCTGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGC
AGATTTTCATTGGACTTTTTCCTTATATTTCGTTGTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTTTCGCTAAACGATATATTTTCTGACTGATTTTTTTCTCCTCGCATTGC
TATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTT
CAATAAAAAGGCATTCTTTTGGAAAGTAGATATGTTTGTACATAACAGGT
GCAACTTAGTAAGAGTGGACTTAAGCCTTTTTTTAATTGAACATGAATTT
TGAAAAATGTTTGAGGGTTAATTTCTCCCTTTTAAAGCTAAAAACCTGCA
CACGACACTCTGAAATAAAGTCACTTCATAGTGCGGAAAGGGGTCTGATC
CCCCCCTTGTTAAATGATCCCCCTTCTTGGCATCCCCCAACCTTTAAAAA
TGGTTATCCCCCATGGGTTTTGGGCTAAATTTTCGAAAATATATACTGTA
TAGTGTGATCCGATAATCCCTTCTTGCTGCTACCCATCCCCTTATAATTA
AAAAAAAATGGCAAACTTCTTTCTTGCTTCTTGTTGACTCAGACTACCCA
AACAGAAAAACATCCTTTCATGCAGACCAGATTTCATAACAGTGCTGGAA
AATAATCTACAATATATGTAAGCCCCCCCCCTTCCTTGCTATCCCCCCTT
TTTTCATGAAAATTTCTGATCCTCCTCCTTCTTCGTTTTTTCGGAAGGTG
TCACCCCCTTAACTATGTACCTTAACTATGTAAACTCAAATAAACCAAAA
ATCAATATCACCACTCTCTATCGGTATTATAATGAAATTAGCAAATATAA
AAAGGATTTCCAGNGCGAACTATGCACTTACACCTAGATTCAAGATAAAG
AGAAAGGACAATATCAGTAAAATAAAGAAAAACTTATTTAAATATTTTGG
TGGACTTCTTCCCTTTTATAATAAAAAGATAGACTTGGGCCTTTCTATTA
TATATAGCAGAGCTTCACTGTGAAGTTTTGGGCCTAACTTTAAGAACTAC
TTGTTATGTACATTAAAAAAGAGACAATTGGCCAGAGATTGACAAAAACT
AAAGATTTCAAAATTCATAAAAACGGACCTAAGTCCCTTTTGAACTAGGG
GGTAGCCGGACTTGGCCTCTTTGGAATTAAGGTAGTGAGTCATGTTTTAT
AAGAACCACTGTTATTATTTGTTAATGACTTTCAGGCTAATTGATATCAA
TATGATTAACTTAAACTTGCAGATGGATGAATCGTTTGCCTTTTTTGCAG
TGTATGCTAAGCTTTGAAGGCAGAAAGTTTTGTGGAGGAAAAGCCGTGAA
ATTTCTTAAGTTAACAAAACTTTTGGAAAAATTTCCATTTTTTGAAAATC
TTTTTTTAATGGAAATAACTTTCGCAAATGGCTCAAAATGTTTTTCTACA
ATCCCTAAGGAAGAAATATTGATAGCCGTTTGTCATAAGCCTTTTTATCT
TCTTTTTTTTTTTTGCTTTTAATTAACTGAGAGGAAAAAACCATTTTTTC
CGCTTACTTTCTTACATCGACCAGCTAGCGTTAACTTTGGCAAAAAAGGC
GAAACTCTCTGCCCTAAAGTATCTTATCGGCCCTTTTTACACCGGCCTTT
GGCGTTATTTTTGGGCACGTGGCGTAATAAGGGCCGGTGTAAAAAGGGGC
CAAGATTTTGAAATTTTTATCTAAAAGTGGCGTTAATTTTCGATCATTGT
TTCTCAATTTAAAGGATTTTAGGTATAATTCGAAGACAAAAATTATCCAT
TCTTTTACTTCATATCTAGGGCCTTACGAAAATCAGTGATTTTGAATGGA
ATTTTCAACAATTTACTACTGAAACATGACATTTTAATGAAAATTTTAAT
GATTATTTACAAATTTGAAGCATAAGTAGCCATTTTTACAAATTTTGGCG
TTATTTTAACGGCCCTTATTGGCGTAAGCCCAAAATTAGGCTGTGGCGTA
ATAAGAGCCGGCGTAAAAAGGGCCTATAAGGTACTTAATATTCGATTTTT
TTCTCAAAGCTAATCAACACCAATTTTTCACATCGTTCTGACCCAGTAAA
ATATCAAATCTTTTCTTCTTGTTTTATAGCACATCCGCAGCTGTTACAGT
CAGAAGTGCTATCCGTCGTCTACGTGAATTACAAGAAATATAAATTTCGA
TCATTTACAATAACATTTGTGTCATTTATATCGACTTCTCTACTCCTGAT
ACTATCACGTAGATACTGTTGAGCTTAACCCTATTCATCATACTAGACTT
TTTGTAACCCACCCCTTAACTTTTGAACTAGTTGGTCTTTTTGGATGAAA
TTTGTGAGGTAGATTCGCTGGAGTTAGGTATTCGGTAGTCGGGATTCGAA
AAAGCTCAATAAAAACTTAACGAAAAAAGATATTAACTTGAAATAAAAAA
CGGATGCAAGCACACATACTAAGGAATAAATCCCAATAAAAAAAATTCAG
AATGTGAGCTCAGTTGTCACGTGACTATGGGAAATTCCCCTATTCGGGAT
TCAAATCATGTCAGGGACCTTTCTTCAAAAACTCGCCAGTCATCAAGGAA
TAGTTGGATTGACTTCAAATAAAAAACGGATGCAAGTTCACATGTCAAGG
AAAATATTCCAAACAAAAAAATTCAGAATATGAGCTTAGTTGTCACGTGA
CTATGGGAAATTCCCCTATTTGGGAGTTATTTCAATTTAGAGACCATTTT
TAAAAAGCTTACCAGTCATAAGGAAATGGTTGGATTGACTTCAAATAACA
AACGGATGCAAGTTCACATGTCAAGAAAAACATTCCAAAAAAGAAAATTC
AGAATATGAGCTTAGTTGTCACGTGACTATGGGAAATTCCCCTTTTCAAG
AGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067022TCONS_00067022Clytia hemisphaericatranscript
TCONS_00067021TCONS_00067021Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:907496..916048 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
432.36	424.55	495.47	599.27	322.57	266.22	340.82	370.15	610.08	505.35	625.7	820.64	826.48	883.93	775.61	727.08	887	843.93	511.99	507.95	802.22	771.39	623.15	587.49	524.89	526.38	692.89	740.67	533.73	549.38