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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064745 ID=TCONS_00064745|Name=TCONS_00064745|organism=Clytia hemisphaerica|type=transcript|length=1539bp
GTATTGAAATTTGCAACATGAATAGGAATTTGTGCTGCGATGTTTTTTGT
TTGGACTTTTGACATGCTGAAAATATGAGAAAGTGCTAAAGCCTTTAGAA
AATAGTTGCGTAACTTGGTTGTTGAGACAATGCAAGCTGGTGCTATAGTC
ATGAAGAGATGCACGTTCGTTGTTTACTTGTCTTTGTCTGAAGtgaaaaa
caaaacaaacaaacaaaactatCGACCATGACGATGTCAAATGGACCTTT
GTTACATTACCATCCCTCAGAAGAACATCAACAAACATTTACTTCTCAAG
CGCATCCGTTGAACCATGAAGGTGGTAACACGCCTCCATCCACACGACCA
GATGTTTGTTTCAACAATTCAAATAATTACACCACTTTTTTTCACGACCA
TCATACGTCACACTCAACCTTGATGACGTCACTGCAAGAAACAGATGAAG
ATGAGGTTAAACGTCCTATGAACTCTTTCCTTCTATGGGCCAAAATTATG
CGTAAACAATATGCCAGTAAGAACCCCAACATGCATAATGCTGAGATCAG
CAAATTGTTAGGCAAGATATGGAATTCTATGACAACAAAAGACAAGCGGC
CGTACGTCGAACAAGCGGAACGCTTACGCGTTGTTCATATGAGGACGTAC
CCCAACTACCGTTACGCACCTAAGAGACGTAAGGAGCGCCGCAACCATCG
CATGATCTCGCCAGAAGTTGCAGCCGCCCTCCATAACACCCTCTTTGATG
TCAATAACATCATAAATGAACAGATTTCTCAAACAGACGTCCTCTcacaa
aacttaaaaagttacgGCTATCTCCGTAGCGCTTTTCAACAAAACCGTAA
CAAAAACATCGGAAACGTTTCTGATTCGCACTCCGACAGCTCATTCTCAA
GATGTAACACAGCCAGTCCTTTACCGTGTTCGGAACAAAGCTTTTCTTCA
GCCTCATCGTGCGAATATCAACTCCAATTGCCGGCAGAAAATCAAATAGC
TACGGAACCGGCCAAAAACCACACGGAATCAATGACATTACACTACCGAC
CGGTCACAAACACAAACTGTGCTGCAACCACTTTCACACAACAAAGTCAA
ACACAGACTGTCGactatttttcatcttcaagcAGCGAATCGAACGATAG
TGGTGCGGAAGACGACACTAACTCCTCAATCGAAGACGAATTTTCTAATT
ATCTAAAACATATTACGTCATCAAGAAATACTGCAAGTGGATTGGTGGAA
AATGATGACGACTCGTTCTTTTGGAATGATATCACTGACATTATAACTTC
TGGATCTTTATAAATTATATCCAACTCATTTGACGAAACCATTTATCTAT
ACTTAAAATGATATAACCATCATTAAATTAACCTCATAGTTTAAAAAACG
AACGCCTTCTAATTTATGACTTATATTTGCACTCCCATATATAATGACAC
GAACCCTCTTGTACATAAAAATGACTTTGTTATGTATTTTATTCAAACCA
CCCTGTACATAGCGATGTGGAAATAATCTTGTATTTTCT Run BLAST on NCBI protein sequence of TCONS_00064745-protein >TCONS_00064745-protein ID=TCONS_00064745-protein|Name=TCONS_00064745-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MTMSNGPLLHYHPSEEHQQTFTSQAHPLNHEGGNTPPSTRPDVCFNNSNN
YTTFFHDHHTSHSTLMTSLQETDEDEVKRPMNSFLLWAKIMRKQYASKNP
NMHNAEISKLLGKIWNSMTTKDKRPYVEQAERLRVVHMRTYPNYRYAPKR
RKERRNHRMISPEVAAALHNTLFDVNNIINEQISQTDVLSQNLKSYGYLR
SAFQQNRNKNIGNVSDSHSDSSFSRCNTASPLPCSEQSFSSASSCEYQLQ
LPAENQIATEPAKNHTESMTLHYRPVTNTNCAATTFTQQSQTQTVDYFSS
SSSESNDSGAEDDTNSSIEDEFSNYLKHITSSRNTASGLVENDDDSFFWN
DITDIITSGSL Run BLAST on NCBI transcript from alignment at scaffold_423:255157..265370+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064745 ID=TCONS_00064745|Name=TCONS_00064745|organism=Clytia hemisphaerica|type=transcript|length=10214bp|location=Sequence derived from alignment at scaffold_423:255157..265370+ (Clytia hemisphaerica)
GTATTGAAATTTGCAACATGAATAGGAATTTGTGCTGCGATGTTTTTTGT
AaggtaaattttttatttcttactCGAAACACCATTTTGCCCTTTGGCCA
GTACAAATTCTTCGCCAATTCAAACCTGAAATAAGTCGGAACTTATTTGG
CGTGACAACTTCATTTTGATAAAGATTTACTATTTTGTTTGTTAGGATTA
GGGAAAttaggtttttttttcataggtggtttcaaaaagtttttaagtGG
AGTTGACACGCCCTTCTATATTATACTGGAAAGTACcttttgatatttgt
ttttcattttcaatttctatattttttctaCATTATAGGTTTGGACTTTT
GACATGCTGAAAATATGAGAAAGTGCTAAAGCCTTTAGAAAATAGTAAGT
GACTAatttatttgtttacatttcaaGTTGGAGAGAGATCTGTCTCACGA
TAAAGATGCAACTTTTGAAACCAAAATAAAGTTTCGTTAAGAATTCGTGA
TGCCCCTTCGAGTCTCCGCCTTGATGCGAGGTTAAGAATAACTTTTGTTT
CGTCTAGACAAAACcacttttctgtttttctttgcatCATTTTTAAAGGG
TACTTTCAAAAATAGACTTTTAATTTTATCTGGTTTGTTTGACCCATACC
AAAAGACCGAATGGAGCTTGGCTGTtctatcctgttcttatttcagGGCA
AGATTTCGGttattttaggctttatacCCAAATTTTCCTACTTTGGTCTT
TAAATTCCTTGAAATTCAACAATTTCAGGGGtaagaaaaagcttttttta
gaAAGAGGGGTAAAGATTTCTGaagtgaactaattttggcgacaACCATT
AGTTAATATTCTAAAGAAATTTAACTAGTAATTAATTTTGGAGAACTAAT
CTTGGCAAATGAGAGGTGAATTGGTTCTGTCTTGCCTAAAATAACAGTAA
TTCGGACAGTAATTAGTAgtcattttagaaaataaaaaaaaaacttttgt
aaaattcGCCAAAACCTTAAGGAATTTACcttaaaatatgtttttcaaaa
ttacaagtNTTTTGTAAAATTCGCCAAAACCTTAAGGAATTTACcttaaa
atatgtttttcaaaattacaagtATTGACCAgtaaaaacaataaaaccaa
CTTATATATaccttcaaaagaaaaagattagAATTAGGGGCAATATTCGC
TATCTTAGATAAAAGTGGTGCTTCTCTGATTGCGTAGCTACATTTTGCGG
AAAGGGGTAGTAGTTATGAAGGGAGGGGTGAGTCTCAGAAGGGAGGGGTA
GACACATTATGTGAACCCCCCAATAGAAAGAGTGATCTGTGTTAAAAAGT
ATAAAGATCCTGTCTATGCCAATTTTATGATTGAATCAGGCTCAATATTT
TGACCGCTACATCAATGAGATTCATTATTGCGAAACACTTTGTCTATAAT
TATCCAATTCTACGAATTATTTTAGGTTGCGTAACTTGGTTGTTGAGACA
ATGCAAGCTGGTGCTATAGTCATGAAGAGATGCACGTTCGTTGTTTACTT
GTCTTTGTCTGAAGGTTTGTTATCTCTTGTACAAGTGtatttttctcttc
aaaaaaaTCCCTTTCAAACGAACCGCACTAAAGGTTATTTTTGTTAAGTG
TCCGCTCTACTAAACTATGCAAGACCAAACTGGCcaaagaggaaaaaatg
ttcaataTCAACTTTGATCATTACCGTATGCCTTGTATGTTTAGACATAT
ATCGAAAGCATCCAACCGaggatctttttttaaatatctgtttccaagac
atagccttcctggaaaatttgatctgttggccgaatatttcaaaaatctt
attcctagaaatgaagatctgtttctccgcaaaacctaaatttttaatct
caaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGTTTTCccaaataggatatctgttcccctcttctggaaatttt
catctgtttccctttctttttgttattgatatctgtttcccccataaagt
tcaatctgtttctaatgcaactttttggattttttggaaacagatatctg
tttcccaatttattatgtcatctcctagaaatattgatctgtttctctct
gatgacgtcatcagctggagcggggaaacaGATAGTTTTAAGGAAAAGGt
ctctcctagaaaatcggatctgtttccccaattttcaaaaaaagctctct
cctggaaaagggaaacagatatttcggggaaatgggctcgttggctgctt
ctgataTATGATTGCTGTTCGGAGTCTGACTCAACTCAGCATGAATGAAT
TTTTTGGGTAATGGATAGTAATCCCCCATTAAAAATAACAGCATCATAAA
GctgaaatataaattttgtatCTTAAAAGGTTCAGGGTGGTGGGCGGGTT
CTGTTTTGGTCTGTTGATTTATTTAAGTAACTTGAATACCTTGGTGACCC
TATTGACACTGATACACCACCAGCTATGACGTGCCATTACTTTCGGtaac
ataaactttcgcgatgTATGGCCtgtttcgcgaaaattaatgtctttgaa
atttcttgGCAAGGCAATTAGCGAAATTAATACAAGCTAACAATTCTTAT
GTGAAATGTTAAGTATAATTTATCTCCGAGTGTCGCCcattcaagaaata
ttttgttttaagaTGATTCTTTAAAGGAAAATCTGAGTGTTTAAATTGTT
TAAAGGCGTTTTTATTGTAGTAAAGTTTGGGATAATTTTTTGGCTTAGGG
CCCGGGAATCTTTGAACATTTTGTACCTATCGACCTTCGTTGTATTCTTC
ACGGTTGATTTCCTTGGCTAGGAGATAACTTTCAAAGCTAGTTATGAAGG
CGGAATGTTTTGACAACTTGAAGTTACCTAGGGTGACCTAACTACCCTCT
CAACATTATAGAGAATAGTAAAAAAGATGAGAGTGAGTCCTTTTAGATTG
CGTGATGACTCTCTCAAGAGGGCTTTCGTCATCATCtagttttatttttc
actttttactttttctcttAATGTTAAAGTTTAATTATAATATGTTAAGA
ACTGCCAATTtatgtttattttcaataatCGACCAATCAGCATCCAGCTT
GTTATTTTTGAGGGTCCCTTTTAACTTGAATATTAAAGTGGCTCAGGCTA
CTTTTTAGATCTCATTTGCTCTTTTACTTAATTTATTTCGACGTGAGATT
TTgggtgaaaaacaaaaacaaacagtcAATTCACAATCAATGCACTTTAA
TCAGTCATATTGCTGCGAAATTTCAAAACTCAATTCAGTACTTTATTCAA
TTGATAGCTCTTCCTATTGAGCTGCGCAGAATAGATCCGCAATTATTTCG
AAAATTGTTTTGTAGTGAGAAAATTGAGTGCGAAAGACAACAAACATACT
AATCTTTATTGAATATAATTTTGCGTAACTTGCACCCGCCGCAAtgaatt
tctaattatttcaaaatctttcgcTGCGTCATTACATTCTTTTCTTCATA
TTTTAACCCTTGAAGTACCTTTTCAGGTATTTTCAAGTGAATGTATCTCA
ATTAAACCGTAAACCCTTGAAGTAGCTTTTCATGTATTTTCAAGTGAATG
CATCTAAATTAAACtgtaaaattttcactttttggtaTAGTATAATTTAG
ACAGAATGAAAATATCCTATAGGTCAATTTTAGTAAATGTAGCATATTAC
AAGGTGAACGTTACTTGAGGGCCTAGCCACCTCACATAGAATTTGAATCG
ACACTGGCTCTGAAAGGGTTAAAAAGTCcatctatttcaaaaattgtttt
gttgtgaGAACTTTGGGTGCTAAACACTAATAAACACAAAAACTCGATGA
ACATTGATATTTTAATATGACGAAATTATCCTATGACACGGTGCTTTCAG
CCTGAGGCGGGCGTTAACAACATTCAAACTGTTGTATCGGCGGAGGGTGG
TGCTAGGTTTGAGGATGACGGATGGCTTGACTTTTCGGGATTTTTCCCTT
TTTAGTAATACTTTGGGAGctgaatttatattttttagttttacgAACCT
TATCGGGATTTTACCGAACCTTACCGACGCATACCCGTATGCATGACCAT
TTTACTAGGCACCATTCTGTAATTCTACAGAAGTAAATACCCTTGTGCAA
TTTAAATTCACACCATGCGGGCAGTTTTTCAGAATTATTTCCACATATTT
GGacaatgggctgttccattaaaaatccatacaggggggggggggacgaa
ttcaagtcaaaaaaaattgtttgaaatgtgtggatacccccctGGAATAt
agcaaaatttgccaaaaattccttggaaaaaatactaacccctggaaatt
ttagaataactttttacctccTGGAAGAATGAAAGAAAGCACTCcattag
accccctggaaattcctCTCGGGTTACCCCTTGGAAATGTTCGCCCCTCA
GTATGCATACACAGTGGAATAGCCCAATAACCACTCATTGACACTTTTTG
TCCAAAAATAAATTACAACAATTTCTAGTTGGGTGGCTGGTACTTTGTCT
TACAATGTCACTAAATTCGATAAAATATATGAATAGAAAAACTTGAAACT
GCTCTCAGACACTAAGCGGCTTATCTTGTTCCATAAATAGGTGCACGTGG
TGCAATATCAATTCTGAGTCTTGTTTTTACTGGCAGTTTCCTAAAGTTTA
TATATTGTTTTCCGCGAACTTTCAAAAAGCAAAAAGCTGTTGTTCAAAAC
CGAAACCTAACTTTAGGAAACGTAGGAACAAAATCATCTTAAATCGAGTC
ATTTTTGTCCAAACATATAGAATTTGTTAGAAAAATCTTTTAAGGATATT
AAATGTACTGCTGGAGTAAGAGAGGTGGGACCAAGAGAGCCTTCTATATC
CAAAATTTATGAATTATGAATATATCCCTATAAACTGAGGATTCAGTTTT
CCTGAGTAATTCCGGTAATAAATGATCGACTTCGACTCCGACTATGATCC
TGACCCTGGAATAAGGCCGactccaaatttaaaaaaaggccgaccctcga
cccAAAAACAATAAAACCCTGCATAATAAACCAGTTCTTCGGCAGTTTTT
ATAATTCATAATTTGCAAGGATGAGGTACAGGAATTATCCTCGGCGCCAT
AGTCGGCCAAAATTGAGCATGCAGGTAGGGGCAGTCCTAGTGGGGGTGTT
AAAACAATAAAAGCATTCTTTCGAGAAAAAGTTTACAATCTATACCTTTA
AAAAAGAcgaggaaataaaaaaaacggaCCCGATCTAGCCTTATCTTTCA
CCTCGGTATTGTTACCCCAATTACAATTACCccatgtttaatttttttgt
tttccaatttttaaaatgGTCTTACATAGTTGTAAACAAATTCTAATCTA
TCCAAAAGGCCGAAGGCATTCTAACTTTGACAAGGCTTGGAGCAGAAGGA
GAAGAATATTACGAAAAATCGAGATTcaagtttcgaaaaaatttaaaata
taaaaactaaaaaaatcgTTCTCGGaattaaattttgattaattttaaat
tcataaaaactaattttttccaAGACTTTGTTCCTTTTCTTAGCGTCCGT
TCGGAAATAaaaatacccctgtctcacagccccgctgaaacttttttcca
acattggggataaaaatttccatctaaatcccgatggggatagaaattcc
atCTCAAAAAATCCAGTAGGGACTGTTTTGGagtagattttttttgctct
gaATTCCGAATGAGTATAAATCAGTTTCAATTTTCCAgtagggctgaaat
tgtagCTCATTTCCCACTGGGGACTAAAGTTTGGCCAGATTTGGCGGAGG
TCCACCCGGgtatgtgacacaggggtggATAAAAGAAGAGGGAAGTGAAT
ATCTAGAACTTTATGAAAAACTGTTCGACGCTGGGACGGTTCCTTTGTTG
TTTTTCATCGTGCAGATATgtattcgaaaaaaataagaGTCGGAAGGTAG
CAATGCAACAAagagttgaaaattcaaaacaagacAAAAATGACATCCAT
CGACGCTATCATCTTCCTGATTCTCTTTTTCACACAGGAcatcaaatatg
aaaaatattttgaaacaaacTGTTGCAAAGCGTGGGCTTGCCTTCTCCTG
TTATCTGCATCCTGAAAAAGAGATTCGctaaccccctggaaatatttCTG
TTTGCCTCTTTCAGATGCTTATATGATGGTATCAAAGATGGGGGTCTGCA
TGAAATACTTTCATCACTGTTCTAATtaaaacaaaagtttcaatttatca
AAACAATCATGCTGTATGCAAAAGAGTTGATTTCCTGGACATTTTAGAAT
TCTTTTCAATGTCCAATATCCTGTCAAGGACGTTACTTTTTAACAACTTC
TTGTCACAAAAAAATATGGAACGTAATGTGACGTCATAAAGTGTAAATTT
GGTAGCTATAGATCTCAAATGAACAGTTTTTTTGTGGAACATATCGTTAT
TTCCTTTTGAATTGACGAGTAGATGCAAAAACGGAAATACTTGAGCAAAA
CAAATCTAACGATCCTCTCCAGTATAAAAAGAACGCAGTTGAACCCTAAG
ACCTTTTCTACTCCATATATAGCACTTTGTCTCGTTTTCACTCTCATACT
GCTCCGCGCTTGATGGCGCTCACTGCACTGTTGTTGAAAATGTTGAGTGG
CTGTTGTCTGGTATATGAGAAAGGTTACATACATACTCGTGCTCTTCAAA
AGCTGCAGTGTTTATGGCTATTCAAAACCACAATGTAGACTAAACgaatt
ttcctttctttcatTTGTgtattatttgtttatttttttctattttttgc
aaTGCACTTCACCTTTTGATTTTGGTTGTTACTTTGTGTGATGTGATGAT
GGTGATAGCGGGGTCGAGATCGTGTTTCGTCACCAGTCCCTCCGTATAAA
AGGCAGGGTTGGTTCACTTCTCATTCATAATTGAATAGAACTTCTAAAGA
GTAAAGATTAAATACTTAAAACGGTGTATCTATCTCTGGTTCGTTGTCTT
GATTGATGTACGCTCAACCTGTAGTCGACAATGTCGTTGATAATTTGTTG
CTTCCACAAATTGTTGAATAAATCGTCTGTCTTCTGCTTCTAACACGGGT
ATTGCGCTGACGGAAACTCTCAAACTATCATATTATATCCATAGCTCTTT
ACGGTTTTATCAAACTAACCTTATGAATGTTGGTCTAGTCTTATTGAATC
TCTTCTTCGTCTCACCTCATACCAGCACCGAATCTAGTCTGTAActagtt
ttaaaatatttaacaatCAATGTCTTATAAGGGAACTATTTcatcacaaa
acaaaaagttgacAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAAGGTTACATACATACTCGTGCTCTTCAAAA
GCTGCAGTGTTTATGGCTATTCAAAACCACAATGTAGACTAAACgaattt
tcctttctttcatTTGTgtattatttgtttatttttttctattttttgca
aTGCACTTCACCTTTTGATTTTGGTTGTTACTTTGTGTGATGTGATGATG
GTGATAGCGGGGTCGAGATCGTGTTTCGTCACCAGTCCCTCCGTATAAAA
GGCAGGGTTGGTTCACTTCTCATTCATAATTGAATAGAACTTCTAAAGAG
TAAAGATTAAATACTTAAAACGGTGTATCTATCTCTGGTTCGTTGTCTTG
ATTGATGTACGCTCAACCTGTAGTCGACAATGTCGTTGATAATTTGTTGC
TTCCACAAATTGTTGAATAAATCGTCTGTCTTCTGCTTCTAACACGGGTA
TTGCGCTGACGGAAACTCTCAAACTATCATATTATATCCATAGCTCTTTA
CGGTTTTATCAAACTAACCTTATGAATGTTGGTCTAGTCTTATTGAATCT
CTTCTTCGTCTCACCTCATACCAGCACCGAATCTAGTCTGTAActagttt
taaaatatttaacaatCAATGTCTTATAAGGGAACTATTTcatcacaaaa
caaaaagttgacAACATCTTTTTCTTGATGTGGCTGCGCCTGTTCTCGAC
CCAGACTTCATGGTGTGACCGTTCGTTTGATGTGGCCTAATAATTTTTTA
AGTTCTTATGTTTATCATTCCTTTTCAAACCTTCTTTTCATTATTTCGTC
ATTTTTTCACAATTTCagtgaaaaacaaaacaaacaaacaaaactatCGA
CCATGACGATGTCAAATGGACCTTTGTTACATTACCATCCCTCAGAAGAA
CATCAACAAACATTTACTTCTCAAGCGCATCCGTTGAACCATGAAGGTGG
TAACACGCCTCCATCCACACGACCAGATGTTTGTTTCAACAATTCAAATA
ATTACACCACTTTTTTTCACGACCATCATACGTCACACTCAACCTTGATG
ACGTCACTGCAAGAAACAGATGAAGATGAGGTTAAACGTCCTATGAACTC
TTTCCTTCTATGGGCCAAAATTATGCGTAAACAATATGCCAGTAAGAACC
CCAACATGCATAATGCTGAGATCAGCAAATTGTTAGGCAAGATATGGAAT
TCTATGACAACAAAAGACAAGCGGCCGTACGTCGAACAAGCGGAACGCTT
ACGCGTTGTTCATATGAGGACGTACCCCAACTACCGTTACGCACCTAAGA
GACGTAAGGAGCGCCGCAACCATCGCATGATCTCGCCAGAAGTTGCAGCC
GCCCTCCATAACACCCTCTTTGATGTCAATAACATCATAAATGAACAGAT
TTCTCAAACAGACGTCCTCTcacaaaacttaaaaagttacgGCTATCTCC
GTAGCGCTTTTCAACAAAACCGTAACAAAAACATCGGAAACGTTTCTGAT
TCGCACTCCGACAGCTCATTCTCAAGATGTAACACAGCCAGTCCTTTACC
GTGTTCGGAACAAAGCTTTTCTTCAGCCTCATCGTGCGAATATCAACTCC
AATTGCCGGCAGAAAATCAAATAGCTACGGAACCGGCCAAAAACCACACG
GAATCAATGACATTACACTACCGACCGGTCACAAACACAAACTGTGCTGC
AACCACTTTCACACAACAAAGTCAAACACAGACTGTCGactatttttcat
cttcaagcAGCGAATCGAACGATAGTGGTGCGGAAGACGACACTAACTCC
TCAATCGAAGACGAATTTTCTAATTATCTAAAACATATTACGTCATCAAG
AAATACTGCAAGTGGATTGGTGGAAAATGATGACGACTCGTTCTTTTGGA
ATGATATCACTGACATTATAACTTCTGGATCTTTATAAATTATATCCAAC
TCATTTGACGAAACCATTTATCTATACTTAAAATGATATAACCATCATTA
AATTAACCTCATAGTTTAAAAAACGAACGCCTTCTAATTTATGACTTATA
TTTGCACTCCCATATATAATGACACGAACCCTCTTGTACATAAAAATGAC
TTTGTTATGTATTTTATTCAAACCACCCTGTACATAGCGATGTGGAAATA
ATCTTGTATTTTCT Coding sequence (CDS) from alignment at scaffold_423:255157..265370+ >TCONS_00064745 ID=TCONS_00064745|Name=TCONS_00064745|organism=Clytia hemisphaerica|type=CDS|length=1086bp|location=Sequence derived from alignment at scaffold_423:255157..265370+ (Clytia hemisphaerica)
ATGACGATGTCAAATGGACCTTTGTTACATTACCATCCCTCAGAAGAACA
TCAACAAACATTTACTTCTCAAGCGCATCCGTTGAACCATGAAGGTGGTA
ACACGCCTCCATCCACACGACCAGATGTTTGTTTCAACAATTCAAATAAT
TACACCACTTTTTTTCACGACCATCATACGTCACACTCAACCTTGATGAC
GTCACTGCAAGAAACAGATGAAGATGAGGTTAAACGTCCTATGAACTCTT
TCCTTCTATGGGCCAAAATTATGCGTAAACAATATGCCAGTAAGAACCCC
AACATGCATAATGCTGAGATCAGCAAATTGTTAGGCAAGATATGGAATTC
TATGACAACAAAAGACAAGCGGCCGTACGTCGAACAAGCGGAACGCTTAC
GCGTTGTTCATATGAGGACGTACCCCAACTACCGTTACGCACCTAAGAGA
CGTAAGGAGCGCCGCAACCATCGCATGATCTCGCCAGAAGTTGCAGCCGC
CCTCCATAACACCCTCTTTGATGTCAATAACATCATAAATGAACAGATTT
CTCAAACAGACGTCCTCTcacaaaacttaaaaagttacgGCTATCTCCGT
AGCGCTTTTCAACAAAACCGTAACAAAAACATCGGAAACGTTTCTGATTC
GCACTCCGACAGCTCATTCTCAAGATGTAACACAGCCAGTCCTTTACCGT
GTTCGGAACAAAGCTTTTCTTCAGCCTCATCGTGCGAATATCAACTCCAA
TTGCCGGCAGAAAATCAAATAGCTACGGAACCGGCCAAAAACCACACGGA
ATCAATGACATTACACTACCGACCGGTCACAAACACAAACTGTGCTGCAA
CCACTTTCACACAACAAAGTCAAACACAGACTGTCGactatttttcatct
tcaagcAGCGAATCGAACGATAGTGGTGCGGAAGACGACACTAACTCCTC
AATCGAAGACGAATTTTCTAATTATCTAAAACATATTACGTCATCAAGAA
ATACTGCAAGTGGATTGGTGGAAAATGATGACGACTCGTTCTTTTGGAAT
GATATCACTGACATTATAACTTCTGGATCTTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064745-exon-scaffold_423-1491911889:255157..255204 | TCONS_00064745-exon-scaffold_423-1491911889:255157..255204 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1510915933:255157..255204 | TCONS_00064745-exon-scaffold_423-1510915933:255157..255204 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1575043694:255157..255204 | TCONS_00064745-exon-scaffold_423-1575043694:255157..255204 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1491911889:255495..255550 | TCONS_00064745-exon-scaffold_423-1491911889:255495..255550 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1510915933:255495..255550 | TCONS_00064745-exon-scaffold_423-1510915933:255495..255550 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1575043694:255495..255550 | TCONS_00064745-exon-scaffold_423-1575043694:255495..255550 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1491911889:256632..256720 | TCONS_00064745-exon-scaffold_423-1491911889:256632..256720 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1510915933:256632..256720 | TCONS_00064745-exon-scaffold_423-1510915933:256632..256720 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1575043694:256632..256720 | TCONS_00064745-exon-scaffold_423-1575043694:256632..256720 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1491911889:264025..265370 | TCONS_00064745-exon-scaffold_423-1491911889:264025..265370 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1510915933:264025..265370 | TCONS_00064745-exon-scaffold_423-1510915933:264025..265370 | Clytia hemisphaerica | exon |
| TCONS_00064745-exon-scaffold_423-1575043694:264025..265370 | TCONS_00064745-exon-scaffold_423-1575043694:264025..265370 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:255157..265370 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR009071 | HMG_box_dom |
Blast
BLAST of TCONS_00064745 vs. Swiss-Prot (Human)
Match: SOX18 (Transcription factor SOX-18 OS=Homo sapiens GN=SOX18 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.925e-28 Identity = 47/89 (52.81%), Postives = 68/89 (76.40%), Query Frame = 3
Query: 435 QETDEDEVKRPMNSFLLWAKIMRKQYASKNPNMHNAEISKLLGKIWNSMTTKDKRPYVEQAERLRVVHMRTYPNYRYAPKRRKERRNHR 701
Q DE ++RPMN+F++WAK RK+ A +NP++HNA +SK+LGK W + +KRP+VE+AERLRV H+R +PNY+Y P+R+K+ R R
Sbjct: 78 QAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKAR 166
The following BLAST results are available for this feature:
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