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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064382 ID=TCONS_00064382|Name=TCONS_00064382|organism=Clytia hemisphaerica|type=transcript|length=1726bp
gtttGAACTTGGTGCGAGTTGCGTTTTATCAGGAAATAAATTTTCTGTTC
ACTGTTAGCACAACAACAAACACACAggcaagaaaaaagtgacaaaactA
TTGACTATGGCTTGTTAAGatgaaatattgcatttttagACACAATCATT
TATCATATGGCGACTGATGGCCGATATTGACATAATAGAGGATGCCTCCC
CTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCT
ATCAAAATATGTGGTGTAGGGCATCTAACAATGTTTGGCATGACAAacaa
atttgatactgattTCCCATCCGGGTTGACAGGGAAACTTGCACCAGAGG
AATTTGAATCCACACTAGTGAGAATAAACAAAGTGTTGGGTAGAAGTTTG
CCAATGAACTTGCGATGGTTGTTGTGTGGCTGTATATGTTGTTGTTGTAC
AATGGGAATGTCCATGTGGCCTGTCCTCTTCTTGAGCAAAAGGACGAGGC
ATACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTTATCACAAG
ctgAGTTTGCACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACAT
GATGGAATATattttattgaTGGAGTTTCGTCCCAAACAACCGATCTACA
AGCCCGATTGATTAAGCTGATTTTTATAGATAGATATTTAAATTATTGTt
atcttaagggaagaaattttgacgaaaatttgCCTCCAAATTCGCCCTAA
AATTCGTCTTTCAAAATAACTGgtcaaaagatattttcttgacaaattga
ACAATTTTATTGATTCACCAAAGTAACTTATGCCAAATTGCACGAAAATT
GCTCGTTATAATtcgttctcgccaaaatttcttgttttaagGTATTGTCA
TATATTTAGTTCTTTACAATGCATTTCAtacttctatttttcgaaaaaaa
ccttTCGGGTTTATTGGGACGATAGTAAGTGTTACGTGATAATATTCCAC
GACTGACACTACAAACCTCTTTTATTTGTTATTGCGTAATCAATACAAGA
CAGTCGGTCATTCTGGTCCAGACGGTATTATAGCTTACTAGTATTGGAAT
TCAttaattcaattaaaaaatttcatgttaatTTTCATAGAAACAAGCAA
TGCCAATACTTTTTTTAGGTTAAGGAATTTCTTGCCATATCTATTAAGTA
GAAGTCAAGACTAAGCTGAGAATTGAGGAAGTTAGGGATGCCTTTTCTGT
TAATGTGCGAGAAGAAAGATTTCACGCTATTTACCTGCTGTAACGCTTTG
AAGGTAGGATATTAACGGTCAAAAcctttgtaaatattttttttagatat
tatATAAACGGAAATttatcataaaatatttcttttttattctagAGTAA
TTCCAAGTTACCTTTTAAGAGTGGCGAGAGGTTGAGACGCCTTGAAATTA
GGAATGCTTTCGTGAACCGAGCCTGCCTTATTACTCTTGAGAAATTTAAT
TTGAAGCCGGCTCTTTTTGGTAACTTCTAATTCTGGattaataatttttg
tttatttatttggtACAGTATTTCATGCTGGAAATTTTTAGTAtactgat
ttttttgtgtttccaTGCAAAGAGAATTTTCATCAAACGAAAGAATGAAT
GAACACTTCCTCTTGGATCACTTTTGTCATAACATCTAATCCTTGATGTC
GTCATTAAATAAACTTTTGACGAAAA Run BLAST on NCBI protein sequence of TCONS_00064382-protein >TCONS_00064382-protein ID=TCONS_00064382-protein|Name=TCONS_00064382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MADIDIIEDASPSQGSSSSSFSYKTPDPIKICGVGHLTMFGMTNKFDTDF
PSGLTGKLAPEEFESTLVRINKVLGRSLPMNLRWLLCGCICCCCTMGMSM
WPVLFLSKRTRHTLEKIIDHENQTLYHKLSLHLKLQKQMITSSNMMEYIL
LMEFRPKQPIYKPD Run BLAST on NCBI transcript from alignment at scaffold_412:44097..53693- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064382 ID=TCONS_00064382|Name=TCONS_00064382|organism=Clytia hemisphaerica|type=transcript|length=9597bp|location=Sequence derived from alignment at scaffold_412:44097..53693- (Clytia hemisphaerica)
GTTTGAACTTGGTGCGAGTTGCGTTTTATCAGGAAATAAATTTTCTGTTC
ACTGTTAGCACAACAACAAACACACAGGCAAGAAAAAAGTGACAAAACTA
TTGACTATGGCTTGTTAAGATGAAATATTGCATTTTTAGACACAATCATT
TATCATATGGCGACTGATGGCCGATATTGACATAATAGAGGATGCCTCCC
CTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCT
ATCAAAATATGTGGTGTAGGGCATCTAACAATGTAAGCCATTTTTTGGAG
CTTTTTTTTGGTGCTCTATTTTGTATTCAATACGATCAAAACTGTCTAGC
TATTGTGTTTAAATATCTAGAAGATGTACCTTTGCTTTTCATAAGATTGT
AACCCTACGGGTTGAGTGTGAGCGAGCAGAGAAATTGACGAATCACCACA
ACACAAAGGTCTTCTTTTCCAGGGATTCCACTTTCTCTCTACCCAGATGG
TGTCAATCGAACGAATCGAATGCCGAACCAATTGAACGCAATTGAACACA
ATCGAATAATTGCGATTCGATTGTCGAACTCAATCGAATCGCAATCGAAT
ATTACCCAGGATTTGCCGTTCGATTGCTTCGATTACGTTCGATTGTATTC
GATTATGTTCCAGTACGTTCGATTGATTTAGATTTTATTCGCTTTCGTAC
GATACTTAATAAGCGCTCGGCCGCCCACGCACGCTAAAAAGCTCTAACAG
AGTGATCCAATTTAATTTAATCGCAATCAAACTCATCGAACATAATCGTA
ATCGAACCAATGGAACATAGTCAACTACCGTCAACTGCTCTAACTTGGGA
CTATCTGAAAAAACATGGGACGGCAATTCGGCCACCATTTCACCAAACCT
CCAAAGTCATTTGATTTGAGTTAAGGTAAAACTTAATCCGAAAATTGATT
TTGCCATGGATCAATGTGGAGTCAGATCACAAACAACGAAATTTTTGAGT
TAAGGAACGGCGTATTAAAAAATATACGATTTCTCTTTCAATTTTACAGT
AAGTGAAAATACAGACCAGATATGAAACAGTCCCATGTTTCGACCAATCA
TCCCAAGTTAGAGCAGTTGACGGTATTAATCGAACCAATCTAACCTTACT
CAAACGCAATTGAACACAATCAAATATTACCCAGGAATCAGCCGTTCGAT
TGAGATTCGATTATGTTCGACAATCGAATCACAATTATTCTATCGCATTC
GATTGCGTCCGATTGGTTCGATTGCAATTTTTGTTTGAAGCTGTTCGATT
GACACCGTCTGGCTCTACCTAACATTCCATTTTCTAAAGGAAAAAGACCA
AGGATAGTTGAAAATTGAAAATTGAAAAAATGAGCTTGAAAGTTAGGTAG
TTTCGTAAGTAAACACAAGGTTTTTTTCTATCGTGTATCTTTAGGGAAAA
AATACCCATTCCAATATGGTACAAAAGACCTTTTGCTAAGACCATCCATG
GCGTATTGTATAATTAAAAAGTCTAGCATAAAAACAATGACACATTATTG
CATACTGTCAACTGCTCTAACTTGGGACTATCTGACAAAACATGGGACAG
AAATTTGGCCACCATTTCACCAACCTCCAAAGTCGTTAATTAACATACCG
CGATTCATAGATAGCAAATAATGTGAATATACTACTCTCGCCAGGTAGGC
TTTCGCACTGCAAAAGGAACAAATCTTTGCGACGAGAAACTTGTAAATAT
GATCGGGCACGCGATTGTATAAAAAGTCTGTTCTTCCACAGAAAATTTGA
AATCTGTTATCGACCACTCTGTAACTTTGACATGTCAATCAATAACACAC
GCTGGAAAAAAGTCTCTAGAGAAAAACAACACAATGGCGTCAAGATGTGG
TAGCGCGGGTGTGATTAAAATTGTTAGTTACTTCTTCAAATTATGTACTT
TTAAAATCCTTTAAAAATACATTCGGTTGTGATTATGAGACGATGAACGT
TTGATTGATAAACTTGGTTGAAGTATAAAAACAAACTTGTTGTCAAAGAG
ATTTAAACAGTAAGTGAAATACAGTCCAGAAATAGACCGTCCCAAGATTT
AACCAATCGTCCCAAGTTAGAGCAGTTGACGGTTCCAGCAGAAAGAGCTT
GAAATGCTGATGAAAATTGAGGCATAAAATATTCCTTGAAAATCTTCCTA
TCAAAAGTTATAGAGTTTGAAAGTTTTGTGATGACATCATCACAAGCCTT
TCCAGGCAAAATTTAAAAACCTTGTAATTTTGGAACAAATTGACCAAATT
TGATGTTGCCAAACAACCAACAAGACAACAGAACATTTAACTAGGTACCA
AAAAAGACCAGAACTGTCTCATTTCCAACATTGTATATAAGACAACTCTC
AATTGGACTTACCCAACTACGAAGAAAAGAAATATATAGGGCTCTGCAAG
TCCACCTTCAAAAAGTGATTCAATGGGCATAAAACATTATCCACAGAGGT
TTGGCGAGTGAAAGATAGCAGAGGAACACCATTAGTCAAGTGGTGTGTGT
TGAGAAAGTCGAAATCTTTTAACCTGATTCAGGACATTATGTGCTTTGCA
AGACCAAGAAATTTGAAATTGTCAATTACCCTGAAAAAAATCTTTTAAAA
ATAAACGTTTTGAAATCATAGTGAAATGTCGCCATCGTCATAAATTCAAT
CTTTAACTCATTGACGGAAAAATTGACGTCATATAATAAGATGATATTGC
AGGGCTCGAAATAACGGTCGGACATCGGACATTGTCCGACCCAAATTGCT
CCTTGTCCGACCCAAAAATCATAATTTTCAAGCTAAAGGAACCCTGATCG
GACATTTTGTCCGACCCACTTGAAATCGTTATTTCGAGCCTTGATATTGA
ATTGTTTTTTCACAACAAAATAGATAATGTAAGGTATATTTTTTAGTTGC
CTGAAGATTTTCACCAAAGTGACATGAAACTGCCAATAGCAGAATAAAAA
AGTATCTTTTCTTCATGACAGACAAAATTTATATTATGCTCAGTTCCATA
TACCAAAAGAGATCCAAAATTGGAACTGCCACTAATTTTTTCATTGTTAA
AAAATTGGTGGCTCTGACCCTATTAACCTTAAAAAGAAATATTGAAAATG
TTGGATAAAACTTGACAATTTTTAGGGACTTGTTCTTGTTTTAGAAATAC
TGAAGTTTAGTCCAGTATGGTGTCGTGGAAGTTGAAATATAGTATAAACC
ATTGAATGAGTTAATTAACAGCTAAATATATGTTCGATAAAAATCAAGAA
AACAAAAATTTGTTCAATTTATTGTAAAAGCTTTTCGACTATTGTCATCG
TCAGTACAGTAAAAAATACATAAGCATATGAAAAAGTATCTACAATTTAT
AAAGAAATGTTAAAAAGTTGAGAAAACACATCAATTGTCACGGGAGCAAC
GATGCCATGACGATTAATGTGTTTTCTTTTGTTCCAGAGTAAAATAATTT
ACGTTATGCCGTTTCTAAATAAGTTTAATTGCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATTAAACTTA
TTTAGAAACGGCATAACGTAAATTATTTTACTCTGGAACAAAAGAAAACA
CATTAATCGTCATGGCATCGTTGCTCCCGTGACAATTGATGTGTTTTCTC
AACTTTTTAACATTTCTTTATAAATTGTAGATACTTTTTCATATGCTTAT
GTATTTTTTACTGTACTGACGATGACAATAGTCGAAAAGCTTTTACAATA
AATTGAACAAATTTTTGTTTTCTTGATTTTTATCGAACATTACTTTGCAT
GGCATTAATCATTCATCAAGCTAAATATACTTTGGCTGAAAAGGATGGTA
TGAATAAGAACCATCTTACCTAAATATTATAAAATCTTTCCGCTTTTCAG
GTTTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGGGTTGACAG
GGAAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAATAAACAAA
GTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTGTGTGGCTG
TATATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGTCCTCTTCT
TGAGCAAAAGGGTAAATTATTCTTCGCTTTCAATAAGCATTATGTAATGA
ACTTTCAAATATTTTGCTGTTTTCAAGAAAGGTGTGCGTACAAAATTGTT
TCTGTCTGATAGGGTAAACCATAGGAATGTATTAATAATGTCCTTTATGT
TCAATGATCTTCGATCAGAAAAAGTCAACAATATGGTGAATATAATTCAT
TGGCACTCCACTCATATTTTACCTTTGAACTAACCGATCTAGTTTGGCAG
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTATCCGACATAGTTGAAAGCTGGTTGGTCGATTTTGCATTCGTTTC
GTGTGCGTTTTGTTTTGGTTGATTTGTTGATGAAGTCTTTCAATAACGGT
GAAGTCAAGTTGTTGTAGATTTTATAAGTTTTGCATGTAAGATGTTACTT
ATAGTAGAAAGCAAGAGGCTTCCACTTTGCTTGAGCGAGAACTTCACAGT
CTTTTACTTTTTTCTTGACTCGTTCGATGAAACGAGCAGCTTTAATGTGG
ATCTTTTCTATATCGTCCAGTAGGTGACCAGCACAATTCCCCCAGATCAA
GATACCATATATTACTGATGGTAAAATACCGCTATTATAGATTGTTCTAA
GCGTAACTTTATCAAGAGTGTTCATTTTGTAAAGGTTTTTAAGTTTGTTG
CTAAAGGCATTACACACCATTTCCGTATGAGGGCCCCATGATAGTTTATT
GTCAAGAATCACACCAAGACATTTTGTTTTGTCAGTTATTTTGATAGAAT
TGTTGTTGGTCTTAACATCTGGTAGGGGACCAATGAACTTCTGTTTGCTT
AATATCAATATTTGACATTTATCTGGATGGATTGAAAGACAGTTCTCTAA
CGAATAATTAGCAATTAGTTCTATTTGTTTTTGCAAGTTAATCATTACTT
CGTCAACAGTGTCAGCTATCGAGTAAGTCTCAGAGTCATCTGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTATTCCTACAACCTTTTTGTCATCTAAGGCTTTATACCATG
TTTCAGTCAAGTATAATAGTAGATCTTCAGTTGATCTAGCTGCTCTAAAA
CCCCATTGGTGTTCATTTAACAAATTAAATGTGACAAGATGATCATTTAG
CTGAGAGCAGATAAATTTCTCAACTACTTTGCTTGGTATGCTGAGTAAAG
AAACAGGTCTATAGTTTGAACAATCCCTTTTTGAGCCCTTTTTGAATACA
CATGAGACTCTAGCTATTTTCCAGTTGTTAGGAAATTTCCCAGTTTGAAC
ACCTTGTTTCAAAACTTGAAACAGACCCGTAGTTGACGCTGATTCGTTAA
TTTTTAAATCTTCAGCAGTAATCATATCAAGCCCACACGCTTTTGCAAGG
TTGACAGCTTTAGTAAAGGATTTTTCAAATAATTTGAAATCGAGCTTCAC
ATCGGAGAGGGCTGGGGTAACTTTGTATATTTGCTTATGTGATGCAGTAG
TGTGATCCTCTCCAATATCAAGAGCTAATTTCTTACCAACATTTGCGAAG
AAACTGTTCAGGAGTTCCGCTTTTTCTTTGTCGTCAGTTATGATTCGCTT
GTTGTCAGCTAGGGGTCCAATAGTACATTTGTTGGTGTCTCCATTGAACT
TTTTTACTGTTTTCCAGAAGCTCTTGGAATTATTAGATTTGTCGAATTCA
TTTCTCCAGTACTTTGCTTTTGCTGCTTTGATTGCATTTGTACACCCGTT
TCTTGATTGTTTATATAGTTTCCATTCGGGTGATCCTTTAGGAGTGCCAT
TTGCGTTCTTGAATAGTTTGTAACGGTTGTTTAATAATTTTCTAATTTTT
CCCGTCATCCAAGGTTCATTTTTGGAACGCACCTTGACTTTTCGTGTTTG
GACGTGTTCGTTAATAACGCCATTAAAAAGTTCTTCCCAGGCCCATAGAG
AGTCGTCAACATCATCGAATATAGAGACAATGTCCCATGGAACCTGCGAT
AAGTCTTGTTTCAGTTTATTTTGATCGGCATTTTTGTAATCTTTAACTGT
TCTTAATTTTGGTGGTGGACGGTCAATAAAGTAGTTCATAGTTACGTATA
TCAGGTTATGATCAGAGATGGCTGATCCATAACTTCCACTTCGAAGGATC
TTGGTGTCGTTCACAGGTATTATAGCCAAGTCAATCAATGTTTTAGAGTT
CTCTGTAATACGAGTGTAATCTTTTATAACATTCTGTAAAGCAACTTTCG
CCAAGCCTCGATGAAGCTGAGGTGTAAGATAAGCATCATCTTTAGCAAGA
TCAATGTTCAAATCTCCAAGTAAAACGATATTTGACCTGTGCGAGTACTT
TTCAAGAATTGGTGTCAAATTGTTCAGAAACTTCTTATCATCAGGTGGGT
GGTAAATACATCCAACTAAAATTGTTTGTGATTTTATAATAATTTCTGCC
CATACTGACTCGATGGCTTTCATATGTTTATCATAGTCTAATTCATAAAT
GTTAATATGCTTTTTATGATAAAAAGTGATGGGAATGTATGTCCTTTATG
TCCAATGATCTTCGATCAGAAAAAGTCAACAATATGGTGAATATAATTCA
TTGGCACTCTACTCATATTTTACCTTTGAACTAACCGATCTAGTTTGGCA
GTATATGATAGTTCTCCTTCTGTTCTTTTAGACGAGGCATACTTTAGAGA
AGATCATTGACCACGAAAATCAAACACTTTATCACAAGGTAAGAAGTATA
AACCACCAAAAAGGTCTTTGTTAGGGTTTTTAGGGGAGTAACCGTGAAGA
TGCTATTGAATCTACCACCAGGATGTCTTTGAGTTAATTTTCTTTTACTA
GCTAGAATATGGTCATGTGTCCTTTCTTTTTAGGAAACTTGCTGTAAATA
TTCAGCCTCGTTGATTGATTTGATCTTTTCTTTTTTTCAGCTGAGTTTGC
ACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATGGAATAT
GTAAGACATTTACCAAATCTTCTTCAAACATTTGTTTTTCTACCTTTTTC
ATTTCCTATTTTCCTCTCATATCCATTTAAGTAGTATAAACTCTTATTTA
TTTTTTTGTTTTTTTGGTTGTTTTTCTTTTGGGGAGCTTCTAACAGGTCA
ACAAAATGCTTTCCCAATCTGCACAGGTATAAAAAGAATTTATTGTGTTT
TGAAATTCTTCAATGCATCTTTGTTTTTTAGATTTTATTGATGGAGTTTC
GTCCCAAACAACCGATCTACAAGCCCGATTGATTAAGCTGATTTTTATAG
ATAGATATTTAAATTATTGTTATCTTAAGGGAAGAAATTTTGACGAAAAT
TTGCCTCCAAATTCGCCCTAAAATTCGTCTTTCAAAATAACTGGTCAAAA
GATATTTTCTTGACAAATTGAACAATTTTATTGATTCACCAAAGTAACTT
ATGCCAAATTGCACGAAAATTGCTCGTTATAATTCGTTCTCGCCAAAATT
TCTTGTTTTAAGGTATTGTCATATATTTAGTTCTTTACAATGCATTTCAT
ACTTCTATTTTTCGAAAAAAACCTTTCGGGTTTATTGGGACGATAGTAAG
TGTTACGTGATAATATTCCACGACTGACACTACAAACCTCTTTTATTTGT
TATTGCGTAATCAATACAAGACAGTCGGTCATTCTGGTCCAGACGGTATT
ATAGCTTACTAGTATTGGAATTCATTAATTCAATTAAAAAATTTCATGTT
AATTTTCATAGAAACAAGCAATGCCAATACTTTTTTTAGGTTAAGGAATT
TCTTGCCATATCTATTAAGTAGAAGTCAAGACTAAGCTGAGAATTGAGGA
AGTTAGGGATGCCTTTTCTGTTAATGTGCGAGAAGAAAGATTTCACGCTA
TTTACCTGCTGTAACGCTTTGAAGGTAGGATATTAACGGTCAAAACCTTT
GTAAATATTTTTTTTAGATATTATATAAACGGAAATTTATCATAAAATAT
TTCTTTTTTATTCTAGAGTAATTCCAAGTTACCTTTTAAGAGTGGCGAGA
GGTTGAGACGCCTTGAAATTAGGAATGCTTTCGTGAACCGAGCCTGCCTT
ATTACTCTTGAGAAATTTAATTTGAAGCCGGCTCTTTTTGGTAACTTCTA
ATTCTGGATTAATAATTTTTGTTTATTTATTTGGTACAGTATTTCATGCT
GGAAATTTTTAGTATACTGATTTTTTTGTGTTTCCATGCAAAGAGAATTT
TCATCAAACGAAAGAATGAATGAACACTTCCTCTTGGATCACTTTTGTCA
TAACATCTAATCCTTGATGTCGTCATTAAATAAACTTTTGACGAAAA Coding sequence (CDS) from alignment at scaffold_412:44097..53693- >TCONS_00064382 ID=TCONS_00064382|Name=TCONS_00064382|organism=Clytia hemisphaerica|type=CDS|length=2475bp|location=Sequence derived from alignment at scaffold_412:44097..53693- (Clytia hemisphaerica)
ATTTTATTGATGGAGTTTCGTCCCAAACAACCGATCTACAAGCCCGATTG
ACTGAGTTTGCACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACA
TGATGGAATATACGAGGCATACTTTAGAGAAGATCATTGACCACGAAAAT
CAAACACTTTATCACAAGGTTTGGCATGACAAACAAATTTGATACTGATT
TCCCATCCGGGTTGACAGGGAAACTTGCACCAGAGGAATTTGAATCCACA
CTAGTGAGAATAAACAAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCG
ATGGTTGTTGTGTGGCTGTATATGTTGTTGTTGTACAATGGGAATGTCCA
TGTGGCCTGTCCTCTTCTTGAGCAAAAGGATGGCCGATATTGACATAATA
GAGGATGCCTCCCCTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAA
AACTCCTGATCCTATCAAAATATGTGGTGTAGGGCATCTAACAATATTTT
ATTGATGGAGTTTCGTCCCAAACAACCGATCTACAAGCCCGATTGACTGA
GTTTGCACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATG
GAATATACGAGGCATACTTTAGAGAAGATCATTGACCACGAAAATCAAAC
ACTTTATCACAAGGTTTGGCATGACAAACAAATTTGATACTGATTTCCCA
TCCGGGTTGACAGGGAAACTTGCACCAGAGGAATTTGAATCCACACTAGT
GAGAATAAACAAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGT
TGTTGTGTGGCTGTATATGTTGTTGTTGTACAATGGGAATGTCCATGTGG
CCTGTCCTCTTCTTGAGCAAAAGGATGGCCGATATTGACATAATAGAGGA
TGCCTCCCCTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTC
CTGATCCTATCAAAATATGTGGTGTAGGGCATCTAACAATATTTTATTGA
TGGAGTTTCGTCCCAAACAACCGATCTACAAGCCCGATTGACTGAGTTTG
CACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATGGAATA
TACGAGGCATACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTT
ATCACAAGGTTTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGG
GTTGACAGGGAAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAA
TAAACAAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTG
TGTGGCTGTATATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGT
CCTCTTCTTGAGCAAAAGGATGGCCGATATTGACATAATAGAGGATGCCT
CCCCTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGAT
CCTATCAAAATATGTGGTGTAGGGCATCTAACAATATTTTATTGATGGAG
TTTCGTCCCAAACAACCGATCTACAAGCCCGATTGACTGAGTTTGCACTT
GAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATGGAATATACGA
GGCATACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTTATCAC
AAGGTTTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGGGTTGA
CAGGGAAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAATAAAC
AAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTGTGTGG
CTGTATATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGTCCTCT
TCTTGAGCAAAAGGATGGCCGATATTGACATAATAGAGGATGCCTCCCCT
TCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCTAT
CAAAATATGTGGTGTAGGGCATCTAACAATATTTTATTGATGGAGTTTCG
TCCCAAACAACCGATCTACAAGCCCGATTGACTGAGTTTGCACTTGAAGC
TCCAAAAACAGATGATTACATCGAGTAACATGATGGAATATACGAGGCAT
ACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTTATCACAAGGT
TTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGGGTTGACAGGG
AAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAATAAACAAAGT
GTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTGTGTGGCTGTA
TATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGTCCTCTTCTTG
AGCAAAAGGATGGCCGATATTGACATAATAGAGGATGCCTCCCCTTCTCA
AGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCTATCAAAA
TATGTGGTGTAGGGCATCTAACAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064382-exon-scaffold_412-1575043694:53412..53693 | TCONS_00064382-exon-scaffold_412-1575043694:53412..53693 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1575043694:48933..49143 | TCONS_00064382-exon-scaffold_412-1575043694:48933..49143 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1575043694:45706..45762 | TCONS_00064382-exon-scaffold_412-1575043694:45706..45762 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1575043694:45444..45503 | TCONS_00064382-exon-scaffold_412-1575043694:45444..45503 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1575043694:44097..45212 | TCONS_00064382-exon-scaffold_412-1575043694:44097..45212 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1510915933:53412..53693 | TCONS_00064382-exon-scaffold_412-1510915933:53412..53693 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1510915933:48933..49143 | TCONS_00064382-exon-scaffold_412-1510915933:48933..49143 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1510915933:45706..45762 | TCONS_00064382-exon-scaffold_412-1510915933:45706..45762 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1510915933:45444..45503 | TCONS_00064382-exon-scaffold_412-1510915933:45444..45503 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1510915933:44097..45212 | TCONS_00064382-exon-scaffold_412-1510915933:44097..45212 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1491911889:53412..53693 | TCONS_00064382-exon-scaffold_412-1491911889:53412..53693 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1491911889:48933..49143 | TCONS_00064382-exon-scaffold_412-1491911889:48933..49143 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1491911889:45706..45762 | TCONS_00064382-exon-scaffold_412-1491911889:45706..45762 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1491911889:45444..45503 | TCONS_00064382-exon-scaffold_412-1491911889:45444..45503 | Clytia hemisphaerica | exon |
| TCONS_00064382-exon-scaffold_412-1491911889:44097..45212 | TCONS_00064382-exon-scaffold_412-1491911889:44097..45212 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_412 | supercontig | scaffold_412:44097..53693 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019383 | Golgin_A_7/ERF4 |
Blast
BLAST of TCONS_00064382 vs. Swiss-Prot (Human)
Match: CHIC2 (Cysteine-rich hydrophobic domain-containing protein 2 OS=Homo sapiens GN=CHIC2 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.480e-39 Identity = 81/140 (57.86%), Postives = 118/140 (84.29%), Query Frame = 2
Query: 239 TPDPIKICGVGHLTMFGMTNKFDTDFPSGLTGKLAPEEFESTLVRINKVLGRSLPMNLRWLLXXXXXXXXTMGMSMWPVLFLSKRTRHTLEKIIDHENQTXXXXXXXXXXXXXXMITSSNMMEYILLMEFRPKQPIYKPD 658
+PDP+ + G GH+T+FG++NKF+++FPS LTGK+APEEF++++ R+N L ++LP+N+RWLLCGC+CCCCT+G SMWPV+ LSKRTR ++EK+++ EN LYHKL LH +L K+ ++NMMEY++L+EF PK PI++PD
Sbjct: 26 SPDPVVVRGSGHVTVFGLSNKFESEFPSSLTGKVAPEEFKASINRVNSCLKKNLPVNVRWLLCGCLCCCCTLGCSMWPVICLSKRTRRSIEKLLEWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTPIFRPD 165
The following BLAST results are available for this feature:
|
