TCONS_00064382 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064382
Unique NameTCONS_00064382
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1726

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064382 ID=TCONS_00064382|Name=TCONS_00064382|organism=Clytia hemisphaerica|type=transcript|length=1726bp
gtttGAACTTGGTGCGAGTTGCGTTTTATCAGGAAATAAATTTTCTGTTC
ACTGTTAGCACAACAACAAACACACAggcaagaaaaaagtgacaaaactA
TTGACTATGGCTTGTTAAGatgaaatattgcatttttagACACAATCATT
TATCATATGGCGACTGATGGCCGATATTGACATAATAGAGGATGCCTCCC
CTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCT
ATCAAAATATGTGGTGTAGGGCATCTAACAATGTTTGGCATGACAAacaa
atttgatactgattTCCCATCCGGGTTGACAGGGAAACTTGCACCAGAGG
AATTTGAATCCACACTAGTGAGAATAAACAAAGTGTTGGGTAGAAGTTTG
CCAATGAACTTGCGATGGTTGTTGTGTGGCTGTATATGTTGTTGTTGTAC
AATGGGAATGTCCATGTGGCCTGTCCTCTTCTTGAGCAAAAGGACGAGGC
ATACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTTATCACAAG
ctgAGTTTGCACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACAT
GATGGAATATattttattgaTGGAGTTTCGTCCCAAACAACCGATCTACA
AGCCCGATTGATTAAGCTGATTTTTATAGATAGATATTTAAATTATTGTt
atcttaagggaagaaattttgacgaaaatttgCCTCCAAATTCGCCCTAA
AATTCGTCTTTCAAAATAACTGgtcaaaagatattttcttgacaaattga
ACAATTTTATTGATTCACCAAAGTAACTTATGCCAAATTGCACGAAAATT
GCTCGTTATAATtcgttctcgccaaaatttcttgttttaagGTATTGTCA
TATATTTAGTTCTTTACAATGCATTTCAtacttctatttttcgaaaaaaa
ccttTCGGGTTTATTGGGACGATAGTAAGTGTTACGTGATAATATTCCAC
GACTGACACTACAAACCTCTTTTATTTGTTATTGCGTAATCAATACAAGA
CAGTCGGTCATTCTGGTCCAGACGGTATTATAGCTTACTAGTATTGGAAT
TCAttaattcaattaaaaaatttcatgttaatTTTCATAGAAACAAGCAA
TGCCAATACTTTTTTTAGGTTAAGGAATTTCTTGCCATATCTATTAAGTA
GAAGTCAAGACTAAGCTGAGAATTGAGGAAGTTAGGGATGCCTTTTCTGT
TAATGTGCGAGAAGAAAGATTTCACGCTATTTACCTGCTGTAACGCTTTG
AAGGTAGGATATTAACGGTCAAAAcctttgtaaatattttttttagatat
tatATAAACGGAAATttatcataaaatatttcttttttattctagAGTAA
TTCCAAGTTACCTTTTAAGAGTGGCGAGAGGTTGAGACGCCTTGAAATTA
GGAATGCTTTCGTGAACCGAGCCTGCCTTATTACTCTTGAGAAATTTAAT
TTGAAGCCGGCTCTTTTTGGTAACTTCTAATTCTGGattaataatttttg
tttatttatttggtACAGTATTTCATGCTGGAAATTTTTAGTAtactgat
ttttttgtgtttccaTGCAAAGAGAATTTTCATCAAACGAAAGAATGAAT
GAACACTTCCTCTTGGATCACTTTTGTCATAACATCTAATCCTTGATGTC
GTCATTAAATAAACTTTTGACGAAAA
Run BLAST on NCBI

protein sequence of TCONS_00064382-protein

>TCONS_00064382-protein ID=TCONS_00064382-protein|Name=TCONS_00064382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MADIDIIEDASPSQGSSSSSFSYKTPDPIKICGVGHLTMFGMTNKFDTDF
PSGLTGKLAPEEFESTLVRINKVLGRSLPMNLRWLLCGCICCCCTMGMSM
WPVLFLSKRTRHTLEKIIDHENQTLYHKLSLHLKLQKQMITSSNMMEYIL
LMEFRPKQPIYKPD
Run BLAST on NCBI

transcript from alignment at scaffold_412:44097..53693-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064382 ID=TCONS_00064382|Name=TCONS_00064382|organism=Clytia hemisphaerica|type=transcript|length=9597bp|location=Sequence derived from alignment at scaffold_412:44097..53693- (Clytia hemisphaerica)
GTTTGAACTTGGTGCGAGTTGCGTTTTATCAGGAAATAAATTTTCTGTTC
ACTGTTAGCACAACAACAAACACACAGGCAAGAAAAAAGTGACAAAACTA
TTGACTATGGCTTGTTAAGATGAAATATTGCATTTTTAGACACAATCATT
TATCATATGGCGACTGATGGCCGATATTGACATAATAGAGGATGCCTCCC
CTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCT
ATCAAAATATGTGGTGTAGGGCATCTAACAATGTAAGCCATTTTTTGGAG
CTTTTTTTTGGTGCTCTATTTTGTATTCAATACGATCAAAACTGTCTAGC
TATTGTGTTTAAATATCTAGAAGATGTACCTTTGCTTTTCATAAGATTGT
AACCCTACGGGTTGAGTGTGAGCGAGCAGAGAAATTGACGAATCACCACA
ACACAAAGGTCTTCTTTTCCAGGGATTCCACTTTCTCTCTACCCAGATGG
TGTCAATCGAACGAATCGAATGCCGAACCAATTGAACGCAATTGAACACA
ATCGAATAATTGCGATTCGATTGTCGAACTCAATCGAATCGCAATCGAAT
ATTACCCAGGATTTGCCGTTCGATTGCTTCGATTACGTTCGATTGTATTC
GATTATGTTCCAGTACGTTCGATTGATTTAGATTTTATTCGCTTTCGTAC
GATACTTAATAAGCGCTCGGCCGCCCACGCACGCTAAAAAGCTCTAACAG
AGTGATCCAATTTAATTTAATCGCAATCAAACTCATCGAACATAATCGTA
ATCGAACCAATGGAACATAGTCAACTACCGTCAACTGCTCTAACTTGGGA
CTATCTGAAAAAACATGGGACGGCAATTCGGCCACCATTTCACCAAACCT
CCAAAGTCATTTGATTTGAGTTAAGGTAAAACTTAATCCGAAAATTGATT
TTGCCATGGATCAATGTGGAGTCAGATCACAAACAACGAAATTTTTGAGT
TAAGGAACGGCGTATTAAAAAATATACGATTTCTCTTTCAATTTTACAGT
AAGTGAAAATACAGACCAGATATGAAACAGTCCCATGTTTCGACCAATCA
TCCCAAGTTAGAGCAGTTGACGGTATTAATCGAACCAATCTAACCTTACT
CAAACGCAATTGAACACAATCAAATATTACCCAGGAATCAGCCGTTCGAT
TGAGATTCGATTATGTTCGACAATCGAATCACAATTATTCTATCGCATTC
GATTGCGTCCGATTGGTTCGATTGCAATTTTTGTTTGAAGCTGTTCGATT
GACACCGTCTGGCTCTACCTAACATTCCATTTTCTAAAGGAAAAAGACCA
AGGATAGTTGAAAATTGAAAATTGAAAAAATGAGCTTGAAAGTTAGGTAG
TTTCGTAAGTAAACACAAGGTTTTTTTCTATCGTGTATCTTTAGGGAAAA
AATACCCATTCCAATATGGTACAAAAGACCTTTTGCTAAGACCATCCATG
GCGTATTGTATAATTAAAAAGTCTAGCATAAAAACAATGACACATTATTG
CATACTGTCAACTGCTCTAACTTGGGACTATCTGACAAAACATGGGACAG
AAATTTGGCCACCATTTCACCAACCTCCAAAGTCGTTAATTAACATACCG
CGATTCATAGATAGCAAATAATGTGAATATACTACTCTCGCCAGGTAGGC
TTTCGCACTGCAAAAGGAACAAATCTTTGCGACGAGAAACTTGTAAATAT
GATCGGGCACGCGATTGTATAAAAAGTCTGTTCTTCCACAGAAAATTTGA
AATCTGTTATCGACCACTCTGTAACTTTGACATGTCAATCAATAACACAC
GCTGGAAAAAAGTCTCTAGAGAAAAACAACACAATGGCGTCAAGATGTGG
TAGCGCGGGTGTGATTAAAATTGTTAGTTACTTCTTCAAATTATGTACTT
TTAAAATCCTTTAAAAATACATTCGGTTGTGATTATGAGACGATGAACGT
TTGATTGATAAACTTGGTTGAAGTATAAAAACAAACTTGTTGTCAAAGAG
ATTTAAACAGTAAGTGAAATACAGTCCAGAAATAGACCGTCCCAAGATTT
AACCAATCGTCCCAAGTTAGAGCAGTTGACGGTTCCAGCAGAAAGAGCTT
GAAATGCTGATGAAAATTGAGGCATAAAATATTCCTTGAAAATCTTCCTA
TCAAAAGTTATAGAGTTTGAAAGTTTTGTGATGACATCATCACAAGCCTT
TCCAGGCAAAATTTAAAAACCTTGTAATTTTGGAACAAATTGACCAAATT
TGATGTTGCCAAACAACCAACAAGACAACAGAACATTTAACTAGGTACCA
AAAAAGACCAGAACTGTCTCATTTCCAACATTGTATATAAGACAACTCTC
AATTGGACTTACCCAACTACGAAGAAAAGAAATATATAGGGCTCTGCAAG
TCCACCTTCAAAAAGTGATTCAATGGGCATAAAACATTATCCACAGAGGT
TTGGCGAGTGAAAGATAGCAGAGGAACACCATTAGTCAAGTGGTGTGTGT
TGAGAAAGTCGAAATCTTTTAACCTGATTCAGGACATTATGTGCTTTGCA
AGACCAAGAAATTTGAAATTGTCAATTACCCTGAAAAAAATCTTTTAAAA
ATAAACGTTTTGAAATCATAGTGAAATGTCGCCATCGTCATAAATTCAAT
CTTTAACTCATTGACGGAAAAATTGACGTCATATAATAAGATGATATTGC
AGGGCTCGAAATAACGGTCGGACATCGGACATTGTCCGACCCAAATTGCT
CCTTGTCCGACCCAAAAATCATAATTTTCAAGCTAAAGGAACCCTGATCG
GACATTTTGTCCGACCCACTTGAAATCGTTATTTCGAGCCTTGATATTGA
ATTGTTTTTTCACAACAAAATAGATAATGTAAGGTATATTTTTTAGTTGC
CTGAAGATTTTCACCAAAGTGACATGAAACTGCCAATAGCAGAATAAAAA
AGTATCTTTTCTTCATGACAGACAAAATTTATATTATGCTCAGTTCCATA
TACCAAAAGAGATCCAAAATTGGAACTGCCACTAATTTTTTCATTGTTAA
AAAATTGGTGGCTCTGACCCTATTAACCTTAAAAAGAAATATTGAAAATG
TTGGATAAAACTTGACAATTTTTAGGGACTTGTTCTTGTTTTAGAAATAC
TGAAGTTTAGTCCAGTATGGTGTCGTGGAAGTTGAAATATAGTATAAACC
ATTGAATGAGTTAATTAACAGCTAAATATATGTTCGATAAAAATCAAGAA
AACAAAAATTTGTTCAATTTATTGTAAAAGCTTTTCGACTATTGTCATCG
TCAGTACAGTAAAAAATACATAAGCATATGAAAAAGTATCTACAATTTAT
AAAGAAATGTTAAAAAGTTGAGAAAACACATCAATTGTCACGGGAGCAAC
GATGCCATGACGATTAATGTGTTTTCTTTTGTTCCAGAGTAAAATAATTT
ACGTTATGCCGTTTCTAAATAAGTTTAATTGCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAATTAAACTTA
TTTAGAAACGGCATAACGTAAATTATTTTACTCTGGAACAAAAGAAAACA
CATTAATCGTCATGGCATCGTTGCTCCCGTGACAATTGATGTGTTTTCTC
AACTTTTTAACATTTCTTTATAAATTGTAGATACTTTTTCATATGCTTAT
GTATTTTTTACTGTACTGACGATGACAATAGTCGAAAAGCTTTTACAATA
AATTGAACAAATTTTTGTTTTCTTGATTTTTATCGAACATTACTTTGCAT
GGCATTAATCATTCATCAAGCTAAATATACTTTGGCTGAAAAGGATGGTA
TGAATAAGAACCATCTTACCTAAATATTATAAAATCTTTCCGCTTTTCAG
GTTTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGGGTTGACAG
GGAAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAATAAACAAA
GTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTGTGTGGCTG
TATATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGTCCTCTTCT
TGAGCAAAAGGGTAAATTATTCTTCGCTTTCAATAAGCATTATGTAATGA
ACTTTCAAATATTTTGCTGTTTTCAAGAAAGGTGTGCGTACAAAATTGTT
TCTGTCTGATAGGGTAAACCATAGGAATGTATTAATAATGTCCTTTATGT
TCAATGATCTTCGATCAGAAAAAGTCAACAATATGGTGAATATAATTCAT
TGGCACTCCACTCATATTTTACCTTTGAACTAACCGATCTAGTTTGGCAG
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTATCCGACATAGTTGAAAGCTGGTTGGTCGATTTTGCATTCGTTTC
GTGTGCGTTTTGTTTTGGTTGATTTGTTGATGAAGTCTTTCAATAACGGT
GAAGTCAAGTTGTTGTAGATTTTATAAGTTTTGCATGTAAGATGTTACTT
ATAGTAGAAAGCAAGAGGCTTCCACTTTGCTTGAGCGAGAACTTCACAGT
CTTTTACTTTTTTCTTGACTCGTTCGATGAAACGAGCAGCTTTAATGTGG
ATCTTTTCTATATCGTCCAGTAGGTGACCAGCACAATTCCCCCAGATCAA
GATACCATATATTACTGATGGTAAAATACCGCTATTATAGATTGTTCTAA
GCGTAACTTTATCAAGAGTGTTCATTTTGTAAAGGTTTTTAAGTTTGTTG
CTAAAGGCATTACACACCATTTCCGTATGAGGGCCCCATGATAGTTTATT
GTCAAGAATCACACCAAGACATTTTGTTTTGTCAGTTATTTTGATAGAAT
TGTTGTTGGTCTTAACATCTGGTAGGGGACCAATGAACTTCTGTTTGCTT
AATATCAATATTTGACATTTATCTGGATGGATTGAAAGACAGTTCTCTAA
CGAATAATTAGCAATTAGTTCTATTTGTTTTTGCAAGTTAATCATTACTT
CGTCAACAGTGTCAGCTATCGAGTAAGTCTCAGAGTCATCTGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTATTCCTACAACCTTTTTGTCATCTAAGGCTTTATACCATG
TTTCAGTCAAGTATAATAGTAGATCTTCAGTTGATCTAGCTGCTCTAAAA
CCCCATTGGTGTTCATTTAACAAATTAAATGTGACAAGATGATCATTTAG
CTGAGAGCAGATAAATTTCTCAACTACTTTGCTTGGTATGCTGAGTAAAG
AAACAGGTCTATAGTTTGAACAATCCCTTTTTGAGCCCTTTTTGAATACA
CATGAGACTCTAGCTATTTTCCAGTTGTTAGGAAATTTCCCAGTTTGAAC
ACCTTGTTTCAAAACTTGAAACAGACCCGTAGTTGACGCTGATTCGTTAA
TTTTTAAATCTTCAGCAGTAATCATATCAAGCCCACACGCTTTTGCAAGG
TTGACAGCTTTAGTAAAGGATTTTTCAAATAATTTGAAATCGAGCTTCAC
ATCGGAGAGGGCTGGGGTAACTTTGTATATTTGCTTATGTGATGCAGTAG
TGTGATCCTCTCCAATATCAAGAGCTAATTTCTTACCAACATTTGCGAAG
AAACTGTTCAGGAGTTCCGCTTTTTCTTTGTCGTCAGTTATGATTCGCTT
GTTGTCAGCTAGGGGTCCAATAGTACATTTGTTGGTGTCTCCATTGAACT
TTTTTACTGTTTTCCAGAAGCTCTTGGAATTATTAGATTTGTCGAATTCA
TTTCTCCAGTACTTTGCTTTTGCTGCTTTGATTGCATTTGTACACCCGTT
TCTTGATTGTTTATATAGTTTCCATTCGGGTGATCCTTTAGGAGTGCCAT
TTGCGTTCTTGAATAGTTTGTAACGGTTGTTTAATAATTTTCTAATTTTT
CCCGTCATCCAAGGTTCATTTTTGGAACGCACCTTGACTTTTCGTGTTTG
GACGTGTTCGTTAATAACGCCATTAAAAAGTTCTTCCCAGGCCCATAGAG
AGTCGTCAACATCATCGAATATAGAGACAATGTCCCATGGAACCTGCGAT
AAGTCTTGTTTCAGTTTATTTTGATCGGCATTTTTGTAATCTTTAACTGT
TCTTAATTTTGGTGGTGGACGGTCAATAAAGTAGTTCATAGTTACGTATA
TCAGGTTATGATCAGAGATGGCTGATCCATAACTTCCACTTCGAAGGATC
TTGGTGTCGTTCACAGGTATTATAGCCAAGTCAATCAATGTTTTAGAGTT
CTCTGTAATACGAGTGTAATCTTTTATAACATTCTGTAAAGCAACTTTCG
CCAAGCCTCGATGAAGCTGAGGTGTAAGATAAGCATCATCTTTAGCAAGA
TCAATGTTCAAATCTCCAAGTAAAACGATATTTGACCTGTGCGAGTACTT
TTCAAGAATTGGTGTCAAATTGTTCAGAAACTTCTTATCATCAGGTGGGT
GGTAAATACATCCAACTAAAATTGTTTGTGATTTTATAATAATTTCTGCC
CATACTGACTCGATGGCTTTCATATGTTTATCATAGTCTAATTCATAAAT
GTTAATATGCTTTTTATGATAAAAAGTGATGGGAATGTATGTCCTTTATG
TCCAATGATCTTCGATCAGAAAAAGTCAACAATATGGTGAATATAATTCA
TTGGCACTCTACTCATATTTTACCTTTGAACTAACCGATCTAGTTTGGCA
GTATATGATAGTTCTCCTTCTGTTCTTTTAGACGAGGCATACTTTAGAGA
AGATCATTGACCACGAAAATCAAACACTTTATCACAAGGTAAGAAGTATA
AACCACCAAAAAGGTCTTTGTTAGGGTTTTTAGGGGAGTAACCGTGAAGA
TGCTATTGAATCTACCACCAGGATGTCTTTGAGTTAATTTTCTTTTACTA
GCTAGAATATGGTCATGTGTCCTTTCTTTTTAGGAAACTTGCTGTAAATA
TTCAGCCTCGTTGATTGATTTGATCTTTTCTTTTTTTCAGCTGAGTTTGC
ACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATGGAATAT
GTAAGACATTTACCAAATCTTCTTCAAACATTTGTTTTTCTACCTTTTTC
ATTTCCTATTTTCCTCTCATATCCATTTAAGTAGTATAAACTCTTATTTA
TTTTTTTGTTTTTTTGGTTGTTTTTCTTTTGGGGAGCTTCTAACAGGTCA
ACAAAATGCTTTCCCAATCTGCACAGGTATAAAAAGAATTTATTGTGTTT
TGAAATTCTTCAATGCATCTTTGTTTTTTAGATTTTATTGATGGAGTTTC
GTCCCAAACAACCGATCTACAAGCCCGATTGATTAAGCTGATTTTTATAG
ATAGATATTTAAATTATTGTTATCTTAAGGGAAGAAATTTTGACGAAAAT
TTGCCTCCAAATTCGCCCTAAAATTCGTCTTTCAAAATAACTGGTCAAAA
GATATTTTCTTGACAAATTGAACAATTTTATTGATTCACCAAAGTAACTT
ATGCCAAATTGCACGAAAATTGCTCGTTATAATTCGTTCTCGCCAAAATT
TCTTGTTTTAAGGTATTGTCATATATTTAGTTCTTTACAATGCATTTCAT
ACTTCTATTTTTCGAAAAAAACCTTTCGGGTTTATTGGGACGATAGTAAG
TGTTACGTGATAATATTCCACGACTGACACTACAAACCTCTTTTATTTGT
TATTGCGTAATCAATACAAGACAGTCGGTCATTCTGGTCCAGACGGTATT
ATAGCTTACTAGTATTGGAATTCATTAATTCAATTAAAAAATTTCATGTT
AATTTTCATAGAAACAAGCAATGCCAATACTTTTTTTAGGTTAAGGAATT
TCTTGCCATATCTATTAAGTAGAAGTCAAGACTAAGCTGAGAATTGAGGA
AGTTAGGGATGCCTTTTCTGTTAATGTGCGAGAAGAAAGATTTCACGCTA
TTTACCTGCTGTAACGCTTTGAAGGTAGGATATTAACGGTCAAAACCTTT
GTAAATATTTTTTTTAGATATTATATAAACGGAAATTTATCATAAAATAT
TTCTTTTTTATTCTAGAGTAATTCCAAGTTACCTTTTAAGAGTGGCGAGA
GGTTGAGACGCCTTGAAATTAGGAATGCTTTCGTGAACCGAGCCTGCCTT
ATTACTCTTGAGAAATTTAATTTGAAGCCGGCTCTTTTTGGTAACTTCTA
ATTCTGGATTAATAATTTTTGTTTATTTATTTGGTACAGTATTTCATGCT
GGAAATTTTTAGTATACTGATTTTTTTGTGTTTCCATGCAAAGAGAATTT
TCATCAAACGAAAGAATGAATGAACACTTCCTCTTGGATCACTTTTGTCA
TAACATCTAATCCTTGATGTCGTCATTAAATAAACTTTTGACGAAAA

Coding sequence (CDS) from alignment at scaffold_412:44097..53693-

>TCONS_00064382 ID=TCONS_00064382|Name=TCONS_00064382|organism=Clytia hemisphaerica|type=CDS|length=2475bp|location=Sequence derived from alignment at scaffold_412:44097..53693- (Clytia hemisphaerica)
ATTTTATTGATGGAGTTTCGTCCCAAACAACCGATCTACAAGCCCGATTG
ACTGAGTTTGCACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACA
TGATGGAATATACGAGGCATACTTTAGAGAAGATCATTGACCACGAAAAT
CAAACACTTTATCACAAGGTTTGGCATGACAAACAAATTTGATACTGATT
TCCCATCCGGGTTGACAGGGAAACTTGCACCAGAGGAATTTGAATCCACA
CTAGTGAGAATAAACAAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCG
ATGGTTGTTGTGTGGCTGTATATGTTGTTGTTGTACAATGGGAATGTCCA
TGTGGCCTGTCCTCTTCTTGAGCAAAAGGATGGCCGATATTGACATAATA
GAGGATGCCTCCCCTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAA
AACTCCTGATCCTATCAAAATATGTGGTGTAGGGCATCTAACAATATTTT
ATTGATGGAGTTTCGTCCCAAACAACCGATCTACAAGCCCGATTGACTGA
GTTTGCACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATG
GAATATACGAGGCATACTTTAGAGAAGATCATTGACCACGAAAATCAAAC
ACTTTATCACAAGGTTTGGCATGACAAACAAATTTGATACTGATTTCCCA
TCCGGGTTGACAGGGAAACTTGCACCAGAGGAATTTGAATCCACACTAGT
GAGAATAAACAAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGT
TGTTGTGTGGCTGTATATGTTGTTGTTGTACAATGGGAATGTCCATGTGG
CCTGTCCTCTTCTTGAGCAAAAGGATGGCCGATATTGACATAATAGAGGA
TGCCTCCCCTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTC
CTGATCCTATCAAAATATGTGGTGTAGGGCATCTAACAATATTTTATTGA
TGGAGTTTCGTCCCAAACAACCGATCTACAAGCCCGATTGACTGAGTTTG
CACTTGAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATGGAATA
TACGAGGCATACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTT
ATCACAAGGTTTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGG
GTTGACAGGGAAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAA
TAAACAAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTG
TGTGGCTGTATATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGT
CCTCTTCTTGAGCAAAAGGATGGCCGATATTGACATAATAGAGGATGCCT
CCCCTTCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGAT
CCTATCAAAATATGTGGTGTAGGGCATCTAACAATATTTTATTGATGGAG
TTTCGTCCCAAACAACCGATCTACAAGCCCGATTGACTGAGTTTGCACTT
GAAGCTCCAAAAACAGATGATTACATCGAGTAACATGATGGAATATACGA
GGCATACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTTATCAC
AAGGTTTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGGGTTGA
CAGGGAAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAATAAAC
AAAGTGTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTGTGTGG
CTGTATATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGTCCTCT
TCTTGAGCAAAAGGATGGCCGATATTGACATAATAGAGGATGCCTCCCCT
TCTCAAGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCTAT
CAAAATATGTGGTGTAGGGCATCTAACAATATTTTATTGATGGAGTTTCG
TCCCAAACAACCGATCTACAAGCCCGATTGACTGAGTTTGCACTTGAAGC
TCCAAAAACAGATGATTACATCGAGTAACATGATGGAATATACGAGGCAT
ACTTTAGAGAAGATCATTGACCACGAAAATCAAACACTTTATCACAAGGT
TTGGCATGACAAACAAATTTGATACTGATTTCCCATCCGGGTTGACAGGG
AAACTTGCACCAGAGGAATTTGAATCCACACTAGTGAGAATAAACAAAGT
GTTGGGTAGAAGTTTGCCAATGAACTTGCGATGGTTGTTGTGTGGCTGTA
TATGTTGTTGTTGTACAATGGGAATGTCCATGTGGCCTGTCCTCTTCTTG
AGCAAAAGGATGGCCGATATTGACATAATAGAGGATGCCTCCCCTTCTCA
AGGAAGCAGCAGCAGCTCTTTTTCATATAAAACTCCTGATCCTATCAAAA
TATGTGGTGTAGGGCATCTAACAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040367XLOC_040367Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064382-exon-scaffold_412-1575043694:53412..53693TCONS_00064382-exon-scaffold_412-1575043694:53412..53693Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1575043694:48933..49143TCONS_00064382-exon-scaffold_412-1575043694:48933..49143Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1575043694:45706..45762TCONS_00064382-exon-scaffold_412-1575043694:45706..45762Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1575043694:45444..45503TCONS_00064382-exon-scaffold_412-1575043694:45444..45503Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1575043694:44097..45212TCONS_00064382-exon-scaffold_412-1575043694:44097..45212Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1510915933:53412..53693TCONS_00064382-exon-scaffold_412-1510915933:53412..53693Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1510915933:48933..49143TCONS_00064382-exon-scaffold_412-1510915933:48933..49143Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1510915933:45706..45762TCONS_00064382-exon-scaffold_412-1510915933:45706..45762Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1510915933:45444..45503TCONS_00064382-exon-scaffold_412-1510915933:45444..45503Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1510915933:44097..45212TCONS_00064382-exon-scaffold_412-1510915933:44097..45212Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1491911889:53412..53693TCONS_00064382-exon-scaffold_412-1491911889:53412..53693Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1491911889:48933..49143TCONS_00064382-exon-scaffold_412-1491911889:48933..49143Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1491911889:45706..45762TCONS_00064382-exon-scaffold_412-1491911889:45706..45762Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1491911889:45444..45503TCONS_00064382-exon-scaffold_412-1491911889:45444..45503Clytia hemisphaericaexon
TCONS_00064382-exon-scaffold_412-1491911889:44097..45212TCONS_00064382-exon-scaffold_412-1491911889:44097..45212Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064382-proteinTCONS_00064382-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_412supercontigscaffold_412:44097..53693 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
51.7316	53.3427	40.7523	39.0148	66.5775	53.2833	43.0565	48.2188	37.8583	36.2504	34.9249	31.8051	32.3986	28.542	22.5358	22.5882	29.4069	31.0949	23.8911	31.6601	32.1086	28.2898	51.2431	50.6099	36.4337	38.0513	72.2811	57.8039	61.4933	71.3
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019383Golgin_A_7/ERF4
Blast
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BLAST of TCONS_00064382 vs. Swiss-Prot (Human)
Match: CHIC2 (Cysteine-rich hydrophobic domain-containing protein 2 OS=Homo sapiens GN=CHIC2 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.480e-39
Identity = 81/140 (57.86%), Postives = 118/140 (84.29%), Query Frame = 2 
Query:  239 TPDPIKICGVGHLTMFGMTNKFDTDFPSGLTGKLAPEEFESTLVRINKVLGRSLPMNLRWLLXXXXXXXXTMGMSMWPVLFLSKRTRHTLEKIIDHENQTXXXXXXXXXXXXXXMITSSNMMEYILLMEFRPKQPIYKPD 658
            +PDP+ + G GH+T+FG++NKF+++FPS LTGK+APEEF++++ R+N  L ++LP+N+RWLLCGC+CCCCT+G SMWPV+ LSKRTR ++EK+++ EN  LYHKL LH +L K+   ++NMMEY++L+EF PK PI++PD
Sbjct:   26 SPDPVVVRGSGHVTVFGLSNKFESEFPSSLTGKVAPEEFKASINRVNSCLKKNLPVNVRWLLCGCLCCCCTLGCSMWPVICLSKRTRRSIEKLLEWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTPIFRPD 165
The following BLAST results are available for this feature:
BLAST of TCONS_00064382 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIC28.480e-3957.86Cysteine-rich hydrophobic domain-containing protei... [more]
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