TCONS_00002037 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00002037
Unique Name	TCONS_00002037
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	5263

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000018:406111..415142+
coding sequence from alignment at sc0000018:406111..415142+

transcript sequence

>TCONS_00002037 ID=TCONS_00002037|Name=TCONS_00002037|organism=Clytia hemisphaerica|type=transcript|length=5263bp
actttgaaccttgaattgttcttatttttatttgttcttattttttctaa
ggtaaaaaacaagttttggctatttacttcactatttagaggattttaga
aactagtgattctttttgctataactactactttttaaaatactttcagc
ctctccactgttcttaaattgttcttatttttggcatttttgagcctagt
tgttcttataaaatttttcttataaaaaaaaagtgtatacaCGTCTCTGC
TGAAGGTTGTTTTACGGTTGTTTTACTTTTACTCTTCCTTATGTGCGGCA
AGTTATTGTTCTATCTCATGTTTATTTTCTTATGCAGAAATAAAttctaa
agaaataaaataagaaatagCATTAAAGCATTTATAACAGCTGAATAAAA
TCATGTCCGCTCATGGTGACGGGGCTGCTACTGCTGAAAGTGTTCAAAGT
AATGCTGAAAGTGACTTACAATCTCTCATACGTACATTCCAAAGCGAAGT
GAAAACGACTGACTGGTTGAAAGAGAATACAGCTGAGAGATGGGAAAAAG
AAAATCCAGAATTGGCGACTGAATATAAGAATGCTATCAAAAGTCAGAAA
CCATCAAAAGAACAGTCAAAGACTGAAAGTGGTGATGAGAAAAATCCTGG
AAGTTAACTGAACTGACAGAAGgagaaaaagtcaagaaaattcCCAAGTG
ACTTTGTTTgcaaggtgacgggtatgttcgagtcgaaaatcaaccctttg
agagaatttttgtcaaaactttGAACGATTTCTCCAGAAAATCATGACCT
TTCGCTTGAGAAGGAAGTTTTAGTCGTTCGTTTTTCAGAGACTAACCTAT
GATTTTGTACCCTTTGAGGAGCCTTTTAGGGCTTGAAAAATGGTAATCTT
AtggcacatacccgtcacctgTTTTGCCTCAGTACAAAAGGCACAGCCAA
AAGCTGTAATCTTTCCATGATTCGCAACgaaaagctgaaattttaaaatt
tgttgCATTACATTGCATTAAACCAAAAAGTCACGGtaaatttgttgaat
ttttcctctcttttcagattttaaaagttgactttttttaaatgtgtATA
AAAAGatagtttatttattttgaatttatcaTGATTTTAGGTCATTATTA
GAGTTTCAAGATTTATAGTTCTGAGAAAGAAACTACTATACTGTTCTGGC
GgtattcaaaattttccttgtatGGTTGAAGTGGcctttttttgctgaaa
tttacaGAATCTAGACATCAGTTTGTATGCAATCTTTCCAAGAAAATAAG
TGACCGAAAACTTTTGTAAGTAAAATCAGCCTGTTTGTTTCGAAATGTCC
CCGATGCATCAAAACGTGTTTAAGATTCCGTCTCTTCCTTACTTTGCAGT
GATCATTTAAAAGTTGACAATATCAGATTTCTATAGCCATTCTCCACGAA
GTTAGCCTAACAAGAAGGCTTTAACAtagcctggttaaccaagcTTATTT
TTCAAGCCCAAGATACGGCTGACGGCAATATAGCGTTATCGgcgctttaa
tgattttttatgatgcACGGAATTTTAAGATGGTCTTGAAAAACTgtata
ttcagtcacaacttaccatcagattttaccaagtgactgaatcaatgtgg
cttagatttctaggctagccTTAACAAGGATATATCTTATAAAGGATATA
ATATCCCTTCATTTCTTATGGTATTTTGCCTTGCGAGGTGACGACAGGAA
ATAAGTATGTCCTGACAGGCTCTTTAAATAACCTCATCTTCCACCCTATT
GATTTTGTTCTTTCCGACACCTTGCCTAATTTTTGATCAATTGGGATTTT
CCCAATGCCTCAAGTTCCTCATGTCGAAACGTCTATAAACATAAATCACT
GTTATAGCTGTGCGTCAGTCATCCCTTTTTGTAAGAAAATAATTAAGCTC
TAATTTTACTACATAATAGTCCACATAATTGATCTATATAGAATATAGAA
TTAGATGCTAAAACATACTTTTTTCCTTATATCTATTTAAGTACTTTTAA
TAATGCTTAATCTCATACATACTATTAtgcttttttgataaaataccTCA
GATTTTTTGCGTAGTTAAAAACGTCAGTGCTTAAACATGTACGTACTGAG
CTATAACAGATCTCTAAAAAATTGCTTGAAGGTAATGTGAAGTTTTGTAA
TGTTCTTATAGAACAAAGCTACAATTTTCTCTTGACATTTCATAGTAAGA
GGAATATTTTGTCTTGCATGTTGTTTTATgataagcaaaaaatagttgTT
CTAGCAgggttttttgttaaaaaagtcaaaaaaaacaaattcttgTAACG
ACAATTTATCACTTTTTCCAACCTATGATTTtgagtttcttataggaagt
ctTCCTCTTTGAGCTTTGTTATTTTATTTGGGATGGCTTTTCTTAAAGCA
AATATGGCGCAATCAGATACTAAGTCAATTTAAAAACATCTTATATTTGA
TATCACTCAATATTATGTCAGGTATGTTACTCAAATTACACCTCAGTTAC
ACCACCATCATTGGTGCTTCTTGAAGAATGTTGAATAGTACAGCTTTTAA
AACctttgtccatttttttttataagaacaaattatattaGAATGTGAGG
CTTCGAAGGCcaatatgttaagaacaagttaagaacatccaaaggcttca
aaaattttggattttcttataaaaaaaacctgtatggttttttttttgtc
tgtATTGCCattgtaaataaaaaatgtttgtcaATCGTAAATTTAGAATA
AGATGAcagactttttttattcttagaAAGGAAAGCCGCATAATTtatgt
caaaaaaataaattaatttcaattGTGTCGTCACGTATAAGGAGTATATA
AATAAAGACAAGGAAACGCACTTTTTAGTATGCATCATGTGCTTGCTCTA
TTAAGATCACAAATTCTTGATCTGTGACTTGACTGTGTGTGATCAAACAA
CACAATTTTGATTATCCTTGTGTTGTGAGGTGTGTTTCCAGTACTAAAGA
TTCATGATCTGATATTATTAACGATCAAAACATACATACATGATATTAGT
GTTCAACGACATAATTTTAATCAAAGAACAGCAAAAAAGTTCTAATCATc
aatcattttgcttggctggttTCCAGTTTTAACAAACGTCAATCGattca
aatacaaaaaacttttgttgtgtgAACGACGAGAGCATATTTGATTGCTA
TTTTCTTCAACTCAGCGTGGAAAATAGGGAAGTGTaaaattattctgagc
tgcTGGTTGCATGTTGGCATCGTGAACTCATATCGGTATCAAACTTTTTC
GTCGATATCTCTGTCACTGCTTAAACTTGAATATCGGACAGTAGCATTTT
TTGACCATTGTACAGACGTTATACTAAGAAGTAATTGTTGTCATATCAAC
CGATTGGGATTCTTGTGGAGTAAAAAAGTTCCTTTAACGTTGGAATACTG
AAAATTTCACTATAACTGGTAGCAATACTTGGTGCGTAACTAGTTATAAA
GGAGTCCGACGAGACACAGCTGTAAAATCGTGAACGAAGAACATAAGTAA
ATATACTGCTGAACTTTTCATCAAAGGTCCAGGGGAATTCTATTATCAAT
TATAAGTTTTCTGAATCcaattttatttgtttcttGTGGCTTTTATCGCG
AACTGGAAATTGACCATGACGTGTCTCTAATGAGATATAAGTCGTTCTCA
AGTTGAATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGA
CGTTGACCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTAC
CACCTGATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATG
CAATTCCCTTGTGGTCATGGTACTTGTAATTATTGTCTACAATCGCTGGC
TAAAAGCAGCTCATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTC
CGATACCAATCAAAAAAgCACTGAAAAACGTAATGTTGAAGCGATTCATC
GAAGCACTTCGTGTCAAATGTATGAACTCTTGGCGAGGGTGTACTTGGGT
CGGAGAAGTCAGCAACATTAAGGATCATTCGTGTGATTATGAAATGACGA
AATGTACAAATGCTGGTTGTGGTGCAGAAATCGAAAAGAAATCTTTACCG
GATCATCTGTTAAAATGCAATgtaaAAGCAGCCGAAACAGATGAACTAAA
TCAGAAAGTCAAAGATCAATCTAAAGAGATTATAGATCTCAAAACGCAAT
TAACAGATTacgaaacattaaaaaaagatcatcaaaatctacagacagaa
caacaaaacttacaaaattttaatcaatttctgCAAGCCAGAATAGATGT
ACTGGAGACGGAGCAAAAGAAACGAGACAGGAGAATAACAAACTCACCTA
TTACTATAGAAGATACTGAAAAGAAACCCTTCGTGACGCTGGAAGATTTA
GAGTGTATTGTTATCAGTGACGACGATGAGAAAAATGGTTTACCAGATTG
TGAAAATGCTCTACCACATTCCGTGCACTCTACAAACACTGATGCAAACG
TTGACTCACATACCTTACACTCACCAAATGCTATTCCAGAGTCTCCAGAA
AGGTTATCTACACCTTTTGCTGATATTGAAAGTATTATATCACGAACCAC
TTTCAACCGTACTGATAGTGGTAATAGCTTTACATATTCAACGGCTGGCC
CGTCTTCTTCGAATGATGTAAACGGGCTACCATATTCTTCACAGTATTTC
AACAATCTTTCAGTCTCTTCTCCTCTTCATATGAACAATCGTCCACGTAC
ACCGCAGTCACTGTATGAAAATAATAATGATAGTGGTAATAGCTTTACAC
AATCATCaaatttaccacattcttcatcatttttcaaTCCATTCTCGTAT
CAAAATAGTATTGACACTGGTTCAACGTCTCGTATTTTTTCTCCATACGA
TTTCAGTAATATTGGTgctaattttcaataattttcacgTGGATTCTTTA
ttgattttcactaaaaacatCATGACCATCAAATGGTCAATGATAGCTAT
TCTTGTGTTTTTAAAAGCATTGTATTATAACacgtttatatttttttgta
aatatttatattaaaaCGATAGTAAAAAACTAACAGATCTTCTTTATTCG
GTTAATAAAACATGTGGATCGCGCCCGTCATCAGTTTTATGATACCCATC
ATAGTCCTTCTCT

Run BLAST on NCBI

protein sequence of TCONS_00002037-protein

>TCONS_00002037-protein ID=TCONS_00002037-protein|Name=TCONS_00002037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=424bp
MMDSLKPFTTDSITDVDQGGYDVDLEDKLDLPPDLKCTICWKLMKDPMQF
PCGHGTCNYCLQSLAKSSSSKSRPLCPQCRSPIPIKKALKNVMLKRFIEA
LRVKCMNSWRGCTWVGEVSNIKDHSCDYEMTKCTNAGCGAEIEKKSLPDH
LLKCNVKAAETDELNQKVKDQSKEIIDLKTQLTDYETLKKDHQNLQTEQQ
NLQNFNQFLQARIDVLETEQKKRDRRITNSPITIEDTEKKPFVTLEDLEC
IVISDDDEKNGLPDCENALPHSVHSTNTDANVDSHTLHSPNAIPESPERL
STPFADIESIISRTTFNRTDSGNSFTYSTAGPSSSNDVNGLPYSSQYFNN
LSVSSPLHMNNRPRTPQSLYENNNDSGNSFTQSSNLPHSSSFFNPFSYQN
SIDTGSTSRIFSPYDFSNIGANFQ

Run BLAST on NCBI

transcript from alignment at sc0000018:406111..415142+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00002037 ID=TCONS_00002037|Name=TCONS_00002037|organism=Clytia hemisphaerica|type=transcript|length=9032bp|location=Sequence derived from alignment at sc0000018:406111..415142+ (Clytia hemisphaerica)
actttgaaccttgaattgttcttatttttatttgttcttattttttctaa
ggtaaaaaacaagttttggctatttacttcactatttagaggattttaga
aactagtgattctttttgctataactactactttttaaaatactttcagc
ctctccactgttcttaaattgttcttatttttggcatttttgagcctagt
tgttcttataaaatttttcttataaaaaaaaagtgtatacaCGTCTCTGC
TGAAGGTTGTTTTACGGTTGTTTTACTTTTACTCTTCCTTATGTGCGGCA
AGTTATTGTTCTATCTCATGTTTATTTTCTTATGCAGAAATAAAttctaa
agaaataaaataagaaatagCATTAAAGCATTTATAACAGCTGAATAAAA
TCATGTCCGCTCATGGTGACGGGGCTGCTACTGCTGAAAGTGTTCAAAGT
AATGCTGAAAGTGACTTACAATCTCTCATACGTACATTCCAAAGCGAAGT
GAAAACGACTGACTGGTTGAAAGAGAATACAGCTGAGAGATGGGAAAAAG
AAAATCCAGAATTGGCGACTGAATATAAGAATGCTATCAAAAGTCAGAAA
CCATCAAAAGAACAGTCAAAGACTGAAAGTGGTGATGAGAAAAATCCTGG
AAGTTAACTGAACTGACAGAAGgagaaaaagtcaagaaaattcCCAAGTG
ACTTTGTTTgcaaggtgacgggtatgttcgagtcgaaaatcaaccctttg
agagaatttttgtcaaaactttGAACGATTTCTCCAGAAAATCATGACCT
TTCGCTTGAGAAGGAAGTTTTAGTCGTTCGTTTTTCAGAGACTAACCTAT
GATTTTGTACCCTTTGAGGAGCCTTTTAGGGCTTGAAAAATGGTAATCTT
AtggcacatacccgtcacctgTTTTGCCTCAGTACAAAAGGCACAGCCAA
AAGCTGTAATCTTTCCATGATTCGCAACgaaaagctgaaattttaaaatt
tgttgCATTACATTGCATTAAACCAAAAAGTCACGGtaaatttgttgaat
ttttcctctcttttcagattttaaaagttgactttttttaaatgtgtATA
AAAAGatagtttatttattttgaatttatcaTGATTTTAGGTCATTATTA
GAGTTTCAAGATTTATAGTTCTGAGAAAGAAACTACTATACTGTTCTGGC
GgtattcaaaattttccttgtatGGTTGAAGTGGcctttttttgctgaaa
tttacaGAATCTAGACATCAGTTTGTATGCAATCTTTCCAAGAAAATAAG
TGACCGAAAACTTTTGTAAGTAAAATCAGCCTGTTTGTTTCGAAATGTCC
CCGATGCATCAAAACGTGTTTAAGATTCCGTCTCTTCCTTACTTTGCAGT
GATCATTTAAAAGTTGACAATATCAGATTTCTATAGCCATTCTCCACGAA
GTTAGCCTAACAAGAAGGCTTTAACAtagcctggttaaccaagcTTATTT
TTCAAGCCCAAGATACGGCTGACGGCAATATAGCGTTATCGgcgctttaa
tgattttttatgatgcACGGAATTTTAAGATGGTCTTGAAAAACTgtata
ttcagtcacaacttaccatcagattttaccaagtgactgaatcaatgtgg
cttagatttctaggctagccTTAACAAGGATATATCTTATAAAGGATATA
ATATCCCTTCATTTCTTATGGTATTTTGCCTTGCGAGGTGACGACAGGAA
ATAAGTATGTCCTGACAGGCTCTTTAAATAACCTCATCTTCCACCCTATT
GATTTTGTTCTTTCCGACACCTTGCCTAATTTTTGATCAATTGGGATTTT
CCCAATGCCTCAAGTTCCTCATGTCGAAACGTCTATAAACATAAATCACT
GTTATAGCTGTGCGTCAGTCATCCCTTTTTGTAAGAAAATAATTAAGCTC
TAATTTTACTACATAATAGTCCACATAATTGATCTATATAGAATATAGAA
TTAGATGCTAAAACATACTTTTTTCCTTATATCTATTTAAGTACTTTTAA
TAATGCTTAATCTCATACATACTATTAtgcttttttgataaaataccTCA
GATTTTTTGCGTAGTTAAAAACGTCAGTGCTTAAACATGTACGTACTGAG
CTATAACAGATCTCTAAAAAATTGCTTGAAGGTAATGTGAAGTTTTGTAA
TGTTCTTATAGAACAAAGCTACAATTTTCTCTTGACATTTCATAGTAAGA
GGAATATTTTGTCTTGCATGTTGTTTTATgataagcaaaaaatagttgTT
CTAGCAgggttttttgttaaaaaagtcaaaaaaaacaaattcttgTAACG
ACAATTTATCACTTTTTCCAACCTATGATTTtgagtttcttataggaagt
ctTCCTCTTTGAGCTTTGTTATTTTATTTGGGATGGCTTTTCTTAAAGCA
AATATGGCGCAATCAGATACTAAGTCAATTTAAAAACATCTTATATTTGA
TATCACTCAATATTATGTCAGGTATGTTACTCAAATTACACCTCAGTTAC
ACCACCATCATTGGTGCTTCTTGAAGAATGTTGAATAGTACAGCTTTTAA
AACctttgtccatttttttttataagaacaaattatattaGAATGTGAGG
CTTCGAAGGCcaatatgttaagaacaagttaagaacatccaaaggcttca
aaaattttggattttcttataaaaaaaacctgtatggttttttttttgtc
tgtATTGCCattgtaaataaaaaatgtttgtcaATCGTAAATTTAGAATA
AGATGAcagactttttttattcttagaAAGGAAAGCCGCATAATTtatgt
caaaaaaataaattaatttcaattGTGTCGTCACGTATAAGGAGTATATA
AATAAAGACAAGGAAACGCACTTTTTAGTATGCATCATGTGCTTGCTCTA
TTAAGATCACAAATTCTTGATCTGTGACTTGACTGTGTGTGATCAAACAA
CACAATTTTGATTATCCTTGTGTTGTGAGGTGTGTTTCCAGTACTAAAGA
TTCATGATCTGATATTATTAACGATCAAAACATACATACATGATATTAGT
GTTCAACGACATAATTTTAATCAAAGAACAGCAAAAAAGTTCTAATCATc
aatcattttgcttggctggttTCCAGTTTTAACAAACGTCAATCGattca
aatacaaaaaacttttgttgtgtgAACGACGAGAGCATATTTGATTGCTA
TTTTCTTCAACTCAGCGTGGAAAATAGGGAAGTGTaaaattattctgagc
tgcTGGTTGCATGTTGGCATCGTGAACTCATATCGGTATCAAACTTTTTC
GTCGATATCTCTGTCACTGCTTAAACTTGAATATCGGACAGTAGCATTTT
TTGACCATTGTACAGACGTTATACTAAGAAGTAATTGTTGTCATATCAAC
CGATTGGGATTCTTGTGGAGTAAAAAAGTTCCTTTAACGTTGGAATACTG
AAAATTTCACTATAACTGGTAGCAATACTTGGTGCGTAACTAGTTATAAA
GGAGTCCGACGAGACACAGCTGTAAAATCGTGAACGAAGAACATAAGTAA
ATATACTGCTGAACTTTTCATCAAAGGTCCAGGGGAATTCTATTATCAAT
TATAAGTTTTCTGAATCcaattttatttgtttcttGTGGCTTTTATCGCG
AACTGGAAATTGACCATGACGTGTCTCTAATGAGATATAAGTCGTTCTCA
AGTTGAATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGA
CGTTGACCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTAC
CACCTGATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATG
CAATTCCCTTGTGGTCATGGTACTTGTAATTATTGTCTACAATCGCTGGC
TAAAAGCAGGTGGGTGGCTGATACCTTTGAAAGTTGCATTTTCAGTAATT
TCCGAACTTTCATATCTTGTATTATTATGGAATCTTTGCGATTTGCTATG
GAATCTTTAAAACTTGACATGTTGTTATGCCTGTTGTAATCTTTTCAAGA
GTTCATTATTCTTTGCCTTCAGAATCTAATCCGAACGTTTATCCTCGATC
ACGTAGGCGTGTTAGAGGTTTGAGAGGTCTTTTTACTGTTGACGTCTTAT
AAATCTTGTCAACAAATATCGAGCGCAAAATTTGAAGTGCAAAATAAAGT
TTCGACAACTCTTTTGCTAGTGAAACTGGGAAGTTCAATTTGTTTATCAT
TAGTCAAACATTGACAAAAAAGGTATCAAATAATTTCCTGTTCGTTTATT
TTTAGCTCATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTCCGAT
ACCAATCAAAAAAGTGAGTAAATATTTCACATGaagggtttttttttcaa
cctagCAAGTTTTGATTTTCACTGACTTCaaatattatgaaaatattCTG
TTTTTTTACACTGGCCTTGAATATTAccaaatacagttgactctcgctta
ttcgaaggGGCATccaatttgttcgaattacagggaGGTTAGTATTAGAG
GGGTTTTATGAAAGGGTTTTTACTTTGAAGGGTGGGACAAGGAATGTtgt
ttttggttgaaatttaaaaatttgaatatggggggggggcggaggatata
aatttttttataaatttaccccccccccNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATTTTGACCCCCGGAAATC
AGGTCTAACCCCTCCCCCctcccggacaagcatcagttgaccctcTGGAT
ATTAAATATTACCCTCAAACGGAGCAAAATCACCCGAAAACAGAGCAAGT
TTTTAACCCCCcgaacaaggcaaattttgtagatttttttacTACCACAG
GACATTATATCCTCCACTCCACCCCCCACCTCCCATGTACgaatattttc
tggaagagcccattttagaaagatttgaatCGTTTGTTCGAATATGCGAG
AGTCAATCTTTACGGGTTGCTTTAAGAATTCCAGTTTAAATATTACTatc
aatttcgtttttttctaggCACTGAAAAACGTAATGTTGAAGCGATTCAT
CGAAGCACTTCGTGTCAAATGTATGAACTCTTGGCGAGGGTGTACTTGGG
TCGGAGAAGTCAGCAACATTAAGGTTGGTTAAAATGAAATAACGTGGCAA
TGATAATGTCTGAAGTGTGaggaaattcaaaattctaTCATTTTAGTACT
TTCTACTTAGTTTATCCATACGTAATCCTTAAATCAATTTAAAGTATATT
TTGGGAAATTTCTTCATAAGTTTTTTATAAAAGGTAGTATCAATCACAAG
TAAGATATCGGCCCTGGAAAATCAAGGTGTATAATGGAATTTTCATGATA
AAGTCTATTGGTAATAGACGAAATTCCAGAGATGGGTCTTGTaaactttg
aaatgaaaatcCAAGGGGGTACCCCCTTCTACCCCATCTAAAACTTCAAG
ACAACTTGCTAAAATGTAAGCAGAAGACGTCCGTCCCATCCAAAATTGAC
CTCTTTAACATTGGGAGTATAACAATTATATATTTCTTCTGCTGTAGGAT
CATTCGTGTGATTATGAAATGACGAAATGTACAAATGCTGGTTGTGGTGC
AGAAATCGAAAAGAAATCTTTACCGGATCATCTGTTAAAATGCAATGTGA
GTATATATGTTTCCTTTTACTTCTTGATAACGAGGTCATTTTTGTGGTTT
GTTGATATGTCTTGTTACTGTCCTTTGGATAAAACTGTAAAATGTCGTAG
ATCTGGTATGGGTAACCTATAGAAATAGACTAAACCAATGAAATCGCATG
TAGGAATATATCAAGATAGTCGAGGCTGTCAATTCGTTTTTGCTTAATGA
AATATCTTATATTATAGGTAAAAGCCGAGGCCAGCAATTCAAATTATCTT
ataaagtcttatttttattttgtaggtaaAAGCAGCCGAAACAGATGAAC
TAAATCAGAAAGTCAAAGATCAATCTAAAGAGATTATAGATCTCAAAACG
CAATTAACAGATTacgaaacattaaaaaaagatcatcaaaatctacagac
agaacaacaaaacttacaaaattttaatcaatttctgCAAGCCAGAATAG
ATGTACTGGAGACGGAGCAAAAGAAACGAGACAGGAGAATAACAAACTCA
CCTATTACTATAGAAGATACTGAAAAGAAACCCTTCGTGACGCTGGAAGA
TTTAGAGTGTATTGTTATCAGTGACGACGATGAGAAAAATGGTTTACCAG
ATTGTGAAAATGCTCTACCACATTCCGTGCACTCTACAAACACTGATGCA
AACGTTGACTCACATACCTTACACTCACCAAATGCTATTCCAGAGTCTCC
AGAAAGGTTATCTACACCTTTTGCTGATATTGAAAGTATTATATCACGAA
CCACTTTCAACCGTACTGATAGTGGTAATAGCTTTACATATTCAACGGCT
GGCCCGTCTTCTTCGAATGATGTAAACGGGCTACCATATTCTTCACAGTA
TTTCAACAATCTTTCAGTCTCTTCTCCTCTTCATATGAACAATCGTCCAC
GTACACCGCAGTCACTGTATGAAAATAATAATGATAGTGGTAATAGCTTT
ACACAATCATCaaatttaccacattcttcatcatttttcaaTCCATTCTC
GTATCAAAATAGTATTGACACTGGTTCAACGTCTNACGGAGCAAAATCAC
CCGAAAACAGAGCAAGTTTTTAACACCCcgaacaaggcaaattttgtaga
tttttttacTACCACAGGACATTATATCCTCCACTCCACCCCCCACCTCC
CATGTACGatcattttctggaagagcccattttagaaagatttgaaCCGT
TTATTCGAATATGCGTGAGTCAATCTTTACGGGTTGCTTTAAGAATTCCA
GTTTAAATATTACTATCAATTTTCGTTTTCCTAGGCACTGAAAAACGTAA
TGTTGAAGCGATTCATCGAAGCACTTCGTGTCAAATGTATAAACTCTTGG
CGAGGGTGTACTTGGGTCGGAGAAGTCAGCAACATAAAGGTTAGTTAAAA
TGAAATAACGTGGCAATGATAATGTCTGTAGTGTGaggaaattcaaaatt
ctaTCATTTCAGTACTTTCTACTTACTTTATCCATACGTAATCCTTAAAT
CAATTTAAAGTATATTTTGGGAAATTTcttcataattttttataaaaggt
aGTATCAATCACAAGTAAGATATCGGCCCTGGAAAATCAAGGTGTATAAT
GGAATTTTCATGATAAAGTCTATTGGTAATAGACGAAATTCCAGAGATGG
GTCTTGTaaactttgaaatgaaaatcCAAGGGGGTACCCCCTTCTACCCC
ATCTAAAACTTCAAGACAACTTGCTAAAATGTAAGCAGAAGACGTCCGTC
CCATCCAAAATTGACCTCTTTAACATTGGGAGTATAACAATTATATATTT
CTTCTGCTGTAGGATCATTCGTGTGATTATGAAATGACGAAATGTACAAA
TGCTGGTTGTGGTGCAGAAATCGAAAAGAAATCTTTACCGGATCATCTGT
TAAAATGCAATGTGAGTATATATGTTTCCTTTTACTTCTTGATAACGAGG
TCATTTTTGTGGTTTGTTGATATGTCTTGTTACTGTCCTTTGGATAAAAC
TGTAAAATGTCGTAGATCTGGTATGGGTAACCTATAGAAATAGACTAAAC
CAATGAAATCGCATGTAGGAATATATCAAGATAGTCGAGGCTGTCAATTC
GTTTTTGCTTAATGAAATATCTTATATTATAGGTAAAAGCCGAGGCCAGC
AATTCAAATTATCTTataaagtcttatttttattttgtaggtaaAAGCAG
CCGAAACAGATGAACTAAATCAGAAAGTCAAAGATCAATCTAAAGAGATT
ATAGATCTCAAAACGCAATTAACAGATTacgaaacattaaaaaaagatca
tcaaaatctacagacagaacaacaaaacttacaaaattttaatcaatttc
tgCAAGCCAGAATAGATGTACTGGAGACGGAGCAAAAGAAACGAGACAGG
AGAATAACAAACTCACCTATTACTATAGAAGATACTGAAAAGAAACCCTT
CGTGACGCTGGAAGATTTAGAGTGTATTGTTATCAGTGACGACGATGAGA
AAAATGGTTTACCAGATTGTGAAAATGCTCTACCACATTCCGTGCACTCT
ACAAACACTGATGCAAACGTTGACTCACATACCTTACACTCACCAAATGC
TATTCCAGAGTCTCCAGAAAGGTTATCTACACCTTTTGCTGATATTGAAA
GTATTATATCACGAACCACTTTCAACCGTACTGATAGTGGTAATAGCTTT
ACATATTCAACGGCTGGCCCGTCTTCTTCGAATGATGTAAACGGGCTACC
ATATTCTTCACAGTATTTCAACAATCTTTCAGTCTCTTCTCCTCTTCATA
TGAACAATCGTCCACGTACACCGCAGTCACTGTATGAAAATAATAATGAT
AGTGGTAATAGCTTTACACAATCATCaaatttaccacattcttcatcatt
tttcaaTCCATTCTCGTATCAAAATAGTATTGACACTGGTTCAACGTCTC
GTATTTTTTCTCCATACGATTTCAGTAATATTGGTgctaattttcaataa
ttttcacgTGGATTCTTTAttgattttcactaaaaacatCATGACCATCA
AATGGTCAATGATAGCTATTCTTGTGTTTTTAAAAGCATTGTATTATAAC
acgtttatatttttttgtaaatatttatattaaaaCGATAGTAAAAAACT
AACAGATCTTCTTTATTCGGTTAATAAAACATGTGGATCGCGCCCGTCAT
CAGTTTTATGATACCCATCATAGTCCTTCTCT

Coding sequence (CDS) from alignment at sc0000018:406111..415142+

>TCONS_00002037 ID=TCONS_00002037|Name=TCONS_00002037|organism=Clytia hemisphaerica|type=CDS|length=6375bp|location=Sequence derived from alignment at sc0000018:406111..415142+ (Clytia hemisphaerica)
ATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGACGTTGA
CCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTACCACCTG
ATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATGCAATTC
CCTTGTGGTCATGGTACTTGTAATTATTGTCTACAATCGCTGGCTAAAAG
CAGCTCATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTCCGATAC
CAATCAAAAAAgCACTGAAAAACGTAATGTTGAAGCGATTCATCGAAGCA
CTTCGTGTCAAATGTATGAACTCTTGGCGAGGGTGTACTTGGGTCGGAGA
AGTCAGCAACATTAAGGATCATTCGTGTGATTATGAAATGACGAAATGTA
CAAATGCTGGTTGTGGTGCAGAAATCGAAAAGAAATCTTTACCGGATCAT
CTGTTAAAATGCAATgtaaAAGCAGCCGAAACAGATGAACTAAATCAGAA
AGTCAAAGATCAATCTAAAGAGATTATAGATCTCAAAACGCAATTAACAG
ATTacgaaacattaaaaaaagatcatcaaaatctacagacagaacaacaa
aacttacaaaattttaatcaatttctgCAAGCCAGAATAGATGTACTGGA
GACGGAGCAAAAGAAACGAGACAGGAGAATAACAAACTCACCTATTACTA
TAGAAGATACTGAAAAGAAACCCTTCGTGACGCTGGAAGATTTAGAGTGT
ATTGTTATCAGTGACGACGATGAGAAAAATGGTTTACCAGATTGTGAAAA
TGCTCTACCACATTCCGTGCACTCTACAAACACTGATGCAAACGTTGACT
CACATACCTTACACTCACCAAATGCTATTCCAGAGTCTCCAGAAAGGTTA
TCTACACCTTTTGCTGATATTGAAAGTATTATATCACGAACCACTTTCAA
CCGTACTGATAGTGGTAATAGCTTTACATATTCAACGGCTGGCCCGTCTT
CTTCGAATGATGTAAACGGGCTACCATATTCTTCACAGTATTTCAACAAT
CTTTCAGTCTCTTCTCCTCTTCATATGAACAATCGTCCACGTACACCGCA
GTCACTGTATGAAAATAATAATGATAGTGGTAATAGCTTTACACAATCAT
CaaatttaccacattcttcatcatttttcaaTCCATTCTCGTATCAAAAT
AGTATTGACACTGGTTCAACGTCTCGTATTTTTTCTCCATACGATTTCAG
TAATATTGGTgctaattttcaataaATGATGGATTCTTTGAAACCCTTCA
CCACAGACAGTATAACAGACGTTGACCAAGGAGGTTATGATGTTGACCTG
GAAGATAAACTTGACTTACCACCTGATTTGAAATGTACCATTTGTTGGAA
ATTGATGAAAGATCCAATGCAATTCCCTTGTGGTCATGGTACTTGTAATT
ATTGTCTACAATCGCTGGCTAAAAGCAGCTCATCAAAAAGTCGACCGCTG
TGTCCACAATGTAGAAGTCCGATACCAATCAAAAAAgCACTGAAAAACGT
AATGTTGAAGCGATTCATCGAAGCACTTCGTGTCAAATGTATGAACTCTT
GGCGAGGGTGTACTTGGGTCGGAGAAGTCAGCAACATTAAGGATCATTCG
TGTGATTATGAAATGACGAAATGTACAAATGCTGGTTGTGGTGCAGAAAT
CGAAAAGAAATCTTTACCGGATCATCTGTTAAAATGCAATgtaaAAGCAG
CCGAAACAGATGAACTAAATCAGAAAGTCAAAGATCAATCTAAAGAGATT
ATAGATCTCAAAACGCAATTAACAGATTacgaaacattaaaaaaagatca
tcaaaatctacagacagaacaacaaaacttacaaaattttaatcaatttc
tgCAAGCCAGAATAGATGTACTGGAGACGGAGCAAAAGAAACGAGACAGG
AGAATAACAAACTCACCTATTACTATAGAAGATACTGAAAAGAAACCCTT
CGTGACGCTGGAAGATTTAGAGTGTATTGTTATCAGTGACGACGATGAGA
AAAATGGTTTACCAGATTGTGAAAATGCTCTACCACATTCCGTGCACTCT
ACAAACACTGATGCAAACGTTGACTCACATACCTTACACTCACCAAATGC
TATTCCAGAGTCTCCAGAAAGGTTATCTACACCTTTTGCTGATATTGAAA
GTATTATATCACGAACCACTTTCAACCGTACTGATAGTGGTAATAGCTTT
ACATATTCAACGGCTGGCCCGTCTTCTTCGAATGATGTAAACGGGCTACC
ATATTCTTCACAGTATTTCAACAATCTTTCAGTCTCTTCTCCTCTTCATA
TGAACAATCGTCCACGTACACCGCAGTCACTGTATGAAAATAATAATGAT
AGTGGTAATAGCTTTACACAATCATCaaatttaccacattcttcatcatt
tttcaaTCCATTCTCGTATCAAAATAGTATTGACACTGGTTCAACGTCTC
GTATTTTTTCTCCATACGATTTCAGTAATATTGGTgctaattttcaataa
ATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGACGTTGA
CCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTACCACCTG
ATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATGCAATTC
CCTTGTGGTCATGGTACTTGTAATTATTGTCTACAATCGCTGGCTAAAAG
CAGCTCATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTCCGATAC
CAATCAAAAAAgCACTGAAAAACGTAATGTTGAAGCGATTCATCGAAGCA
CTTCGTGTCAAATGTATGAACTCTTGGCGAGGGTGTACTTGGGTCGGAGA
AGTCAGCAACATTAAGGATCATTCGTGTGATTATGAAATGACGAAATGTA
CAAATGCTGGTTGTGGTGCAGAAATCGAAAAGAAATCTTTACCGGATCAT
CTGTTAAAATGCAATgtaaAAGCAGCCGAAACAGATGAACTAAATCAGAA
AGTCAAAGATCAATCTAAAGAGATTATAGATCTCAAAACGCAATTAACAG
ATTacgaaacattaaaaaaagatcatcaaaatctacagacagaacaacaa
aacttacaaaattttaatcaatttctgCAAGCCAGAATAGATGTACTGGA
GACGGAGCAAAAGAAACGAGACAGGAGAATAACAAACTCACCTATTACTA
TAGAAGATACTGAAAAGAAACCCTTCGTGACGCTGGAAGATTTAGAGTGT
ATTGTTATCAGTGACGACGATGAGAAAAATGGTTTACCAGATTGTGAAAA
TGCTCTACCACATTCCGTGCACTCTACAAACACTGATGCAAACGTTGACT
CACATACCTTACACTCACCAAATGCTATTCCAGAGTCTCCAGAAAGGTTA
TCTACACCTTTTGCTGATATTGAAAGTATTATATCACGAACCACTTTCAA
CCGTACTGATAGTGGTAATAGCTTTACATATTCAACGGCTGGCCCGTCTT
CTTCGAATGATGTAAACGGGCTACCATATTCTTCACAGTATTTCAACAAT
CTTTCAGTCTCTTCTCCTCTTCATATGAACAATCGTCCACGTACACCGCA
GTCACTGTATGAAAATAATAATGATAGTGGTAATAGCTTTACACAATCAT
CaaatttaccacattcttcatcatttttcaaTCCATTCTCGTATCAAAAT
AGTATTGACACTGGTTCAACGTCTCGTATTTTTTCTCCATACGATTTCAG
TAATATTGGTgctaattttcaataaATGATGGATTCTTTGAAACCCTTCA
CCACAGACAGTATAACAGACGTTGACCAAGGAGGTTATGATGTTGACCTG
GAAGATAAACTTGACTTACCACCTGATTTGAAATGTACCATTTGTTGGAA
ATTGATGAAAGATCCAATGCAATTCCCTTGTGGTCATGGTACTTGTAATT
ATTGTCTACAATCGCTGGCTAAAAGCAGCTCATCAAAAAGTCGACCGCTG
TGTCCACAATGTAGAAGTCCGATACCAATCAAAAAAgCACTGAAAAACGT
AATGTTGAAGCGATTCATCGAAGCACTTCGTGTCAAATGTATGAACTCTT
GGCGAGGGTGTACTTGGGTCGGAGAAGTCAGCAACATTAAGGATCATTCG
TGTGATTATGAAATGACGAAATGTACAAATGCTGGTTGTGGTGCAGAAAT
CGAAAAGAAATCTTTACCGGATCATCTGTTAAAATGCAATgtaaAAGCAG
CCGAAACAGATGAACTAAATCAGAAAGTCAAAGATCAATCTAAAGAGATT
ATAGATCTCAAAACGCAATTAACAGATTacgaaacattaaaaaaagatca
tcaaaatctacagacagaacaacaaaacttacaaaattttaatcaatttc
tgCAAGCCAGAATAGATGTACTGGAGACGGAGCAAAAGAAACGAGACAGG
AGAATAACAAACTCACCTATTACTATAGAAGATACTGAAAAGAAACCCTT
CGTGACGCTGGAAGATTTAGAGTGTATTGTTATCAGTGACGACGATGAGA
AAAATGGTTTACCAGATTGTGAAAATGCTCTACCACATTCCGTGCACTCT
ACAAACACTGATGCAAACGTTGACTCACATACCTTACACTCACCAAATGC
TATTCCAGAGTCTCCAGAAAGGTTATCTACACCTTTTGCTGATATTGAAA
GTATTATATCACGAACCACTTTCAACCGTACTGATAGTGGTAATAGCTTT
ACATATTCAACGGCTGGCCCGTCTTCTTCGAATGATGTAAACGGGCTACC
ATATTCTTCACAGTATTTCAACAATCTTTCAGTCTCTTCTCCTCTTCATA
TGAACAATCGTCCACGTACACCGCAGTCACTGTATGAAAATAATAATGAT
AGTGGTAATAGCTTTACACAATCATCaaatttaccacattcttcatcatt
tttcaaTCCATTCTCGTATCAAAATAGTATTGACACTGGTTCAACGTCTC
GTATTTTTTCTCCATACGATTTCAGTAATATTGGTgctaattttcaataa
ATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGACGTTGA
CCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTACCACCTG
ATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATGCAATTC
CCTTGTGGTCATGGTACTTGTAATTATTGTCTACAATCGCTGGCTAAAAG
CAGCTCATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTCCGATAC
CAATCAAAAAAgCACTGAAAAACGTAATGTTGAAGCGATTCATCGAAGCA
CTTCGTGTCAAATGTATGAACTCTTGGCGAGGGTGTACTTGGGTCGGAGA
AGTCAGCAACATTAAGGATCATTCGTGTGATTATGAAATGACGAAATGTA
CAAATGCTGGTTGTGGTGCAGAAATCGAAAAGAAATCTTTACCGGATCAT
CTGTTAAAATGCAATgtaaAAGCAGCCGAAACAGATGAACTAAATCAGAA
AGTCAAAGATCAATCTAAAGAGATTATAGATCTCAAAACGCAATTAACAG
ATTacgaaacattaaaaaaagatcatcaaaatctacagacagaacaacaa
aacttacaaaattttaatcaatttctgCAAGCCAGAATAGATGTACTGGA
GACGGAGCAAAAGAAACGAGACAGGAGAATAACAAACTCACCTATTACTA
TAGAAGATACTGAAAAGAAACCCTTCGTGACGCTGGAAGATTTAGAGTGT
ATTGTTATCAGTGACGACGATGAGAAAAATGGTTTACCAGATTGTGAAAA
TGCTCTACCACATTCCGTGCACTCTACAAACACTGATGCAAACGTTGACT
CACATACCTTACACTCACCAAATGCTATTCCAGAGTCTCCAGAAAGGTTA
TCTACACCTTTTGCTGATATTGAAAGTATTATATCACGAACCACTTTCAA
CCGTACTGATAGTGGTAATAGCTTTACATATTCAACGGCTGGCCCGTCTT
CTTCGAATGATGTAAACGGGCTACCATATTCTTCACAGTATTTCAACAAT
CTTTCAGTCTCTTCTCCTCTTCATATGAACAATCGTCCACGTACACCGCA
GTCACTGTATGAAAATAATAATGATAGTGGTAATAGCTTTACACAATCAT
CaaatttaccacattcttcatcatttttcaaTCCATTCTCGTATCAAAAT
AGTATTGACACTGGTTCAACGTCTCGTATTTTTTCTCCATACGATTTCAG
TAATATTGGTgctaattttcaataa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001072	XLOC_001072	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00002037-protein	TCONS_00002037-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000018	supercontig	sc0000018:406111..415142 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11315	1.24211	0.237503	0.245994	1.11585	0.657407	1.24176	2.84813	0.579439	1.50327	1.04855	1.28368	2.3448	1.46285	0.914962	0.577839	8.36869e-06	0.879006	1.80979	1.6939	0.905382	0.42871	1.20901	1.38256	0.000315914	1.61075	4.05034	3.29577	1.76676	1.8284

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR008974	TRAF-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00002037 vs. Swiss-Prot (Human)

BLAST of TCONS_00002037 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00002037 (transcript) - C. hemisphaerica