XLOC_001072 (gene) - C. hemisphaerica

Overview
NameXLOC_001072
Unique NameXLOC_001072
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:406111..415142+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001072 ID=XLOC_001072|Name=XLOC_001072|organism=Clytia hemisphaerica|type=gene|length=9032bp|location=Sequence derived from alignment at sc0000018:406111..415142+ (Clytia hemisphaerica)
actttgaaccttgaattgttcttatttttatttgttcttattttttctaa ggtaaaaaacaagttttggctatttacttcactatttagaggattttaga aactagtgattctttttgctataactactactttttaaaatactttcagc ctctccactgttcttaaattgttcttatttttggcatttttgagcctagt tgttcttataaaatttttcttataaaaaaaaagtgtatacaCGTCTCTGC TGAAGGTTGTTTTACGGTTGTTTTACTTTTACTCTTCCTTATGTGCGGCA AGTTATTGTTCTATCTCATGTTTATTTTCTTATGCAGAAATAAAttctaa agaaataaaataagaaatagCATTAAAGCATTTATAACAGCTGAATAAAA TCATGTCCGCTCATGGTGACGGGGCTGCTACTGCTGAAAGTGTTCAAAGT AATGCTGAAAGTGACTTACAATCTCTCATACGTACATTCCAAAGCGAAGT GAAAACGACTGACTGGTTGAAAGAGAATACAGCTGAGAGATGGGAAAAAG AAAATCCAGAATTGGCGACTGAATATAAGAATGCTATCAAAAGTCAGAAA CCATCAAAAGAACAGTCAAAGACTGAAAGTGGTGATGAGAAAAATCCTGG AAGTTAACTGAACTGACAGAAGgagaaaaagtcaagaaaattcCCAAGTG ACTTTGTTTgcaaggtgacgggtatgttcgagtcgaaaatcaaccctttg agagaatttttgtcaaaactttGAACGATTTCTCCAGAAAATCATGACCT TTCGCTTGAGAAGGAAGTTTTAGTCGTTCGTTTTTCAGAGACTAACCTAT GATTTTGTACCCTTTGAGGAGCCTTTTAGGGCTTGAAAAATGGTAATCTT AtggcacatacccgtcacctgTTTTGCCTCAGTACAAAAGGCACAGCCAA AAGCTGTAATCTTTCCATGATTCGCAACgaaaagctgaaattttaaaatt tgttgCATTACATTGCATTAAACCAAAAAGTCACGGtaaatttgttgaat ttttcctctcttttcagattttaaaagttgactttttttaaatgtgtATA AAAAGatagtttatttattttgaatttatcaTGATTTTAGGTCATTATTA GAGTTTCAAGATTTATAGTTCTGAGAAAGAAACTACTATACTGTTCTGGC GgtattcaaaattttccttgtatGGTTGAAGTGGcctttttttgctgaaa tttacaGAATCTAGACATCAGTTTGTATGCAATCTTTCCAAGAAAATAAG TGACCGAAAACTTTTGTAAGTAAAATCAGCCTGTTTGTTTCGAAATGTCC CCGATGCATCAAAACGTGTTTAAGATTCCGTCTCTTCCTTACTTTGCAGT GATCATTTAAAAGTTGACAATATCAGATTTCTATAGCCATTCTCCACGAA GTTAGCCTAACAAGAAGGCTTTAACAtagcctggttaaccaagcTTATTT TTCAAGCCCAAGATACGGCTGACGGCAATATAGCGTTATCGgcgctttaa tgattttttatgatgcACGGAATTTTAAGATGGTCTTGAAAAACTgtata ttcagtcacaacttaccatcagattttaccaagtgactgaatcaatgtgg cttagatttctaggctagccTTAACAAGGATATATCTTATAAAGGATATA ATATCCCTTCATTTCTTATGGTATTTTGCCTTGCGAGGTGACGACAGGAA ATAAGTATGTCCTGACAGGCTCTTTAAATAACCTCATCTTCCACCCTATT GATTTTGTTCTTTCCGACACCTTGCCTAATTTTTGATCAATTGGGATTTT CCCAATGCCTCAAGTTCCTCATGTCGAAACGTCTATAAACATAAATCACT GTTATAGCTGTGCGTCAGTCATCCCTTTTTGTAAGAAAATAATTAAGCTC TAATTTTACTACATAATAGTCCACATAATTGATCTATATAGAATATAGAA TTAGATGCTAAAACATACTTTTTTCCTTATATCTATTTAAGTACTTTTAA TAATGCTTAATCTCATACATACTATTAtgcttttttgataaaataccTCA GATTTTTTGCGTAGTTAAAAACGTCAGTGCTTAAACATGTACGTACTGAG CTATAACAGATCTCTAAAAAATTGCTTGAAGGTAATGTGAAGTTTTGTAA TGTTCTTATAGAACAAAGCTACAATTTTCTCTTGACATTTCATAGTAAGA GGAATATTTTGTCTTGCATGTTGTTTTATgataagcaaaaaatagttgTT CTAGCAgggttttttgttaaaaaagtcaaaaaaaacaaattcttgTAACG ACAATTTATCACTTTTTCCAACCTATGATTTtgagtttcttataggaagt ctTCCTCTTTGAGCTTTGTTATTTTATTTGGGATGGCTTTTCTTAAAGCA AATATGGCGCAATCAGATACTAAGTCAATTTAAAAACATCTTATATTTGA TATCACTCAATATTATGTCAGGTATGTTACTCAAATTACACCTCAGTTAC ACCACCATCATTGGTGCTTCTTGAAGAATGTTGAATAGTACAGCTTTTAA AACctttgtccatttttttttataagaacaaattatattaGAATGTGAGG CTTCGAAGGCcaatatgttaagaacaagttaagaacatccaaaggcttca aaaattttggattttcttataaaaaaaacctgtatggttttttttttgtc tgtATTGCCattgtaaataaaaaatgtttgtcaATCGTAAATTTAGAATA AGATGAcagactttttttattcttagaAAGGAAAGCCGCATAATTtatgt caaaaaaataaattaatttcaattGTGTCGTCACGTATAAGGAGTATATA AATAAAGACAAGGAAACGCACTTTTTAGTATGCATCATGTGCTTGCTCTA TTAAGATCACAAATTCTTGATCTGTGACTTGACTGTGTGTGATCAAACAA CACAATTTTGATTATCCTTGTGTTGTGAGGTGTGTTTCCAGTACTAAAGA TTCATGATCTGATATTATTAACGATCAAAACATACATACATGATATTAGT GTTCAACGACATAATTTTAATCAAAGAACAGCAAAAAAGTTCTAATCATc aatcattttgcttggctggttTCCAGTTTTAACAAACGTCAATCGattca aatacaaaaaacttttgttgtgtgAACGACGAGAGCATATTTGATTGCTA TTTTCTTCAACTCAGCGTGGAAAATAGGGAAGTGTaaaattattctgagc tgcTGGTTGCATGTTGGCATCGTGAACTCATATCGGTATCAAACTTTTTC GTCGATATCTCTGTCACTGCTTAAACTTGAATATCGGACAGTAGCATTTT TTGACCATTGTACAGACGTTATACTAAGAAGTAATTGTTGTCATATCAAC CGATTGGGATTCTTGTGGAGTAAAAAAGTTCCTTTAACGTTGGAATACTG AAAATTTCACTATAACTGGTAGCAATACTTGGTGCGTAACTAGTTATAAA GGAGTCCGACGAGACACAGCTGTAAAATCGTGAACGAAGAACATAAGTAA ATATACTGCTGAACTTTTCATCAAAGGTCCAGGGGAATTCTATTATCAAT TATAAGTTTTCTGAATCcaattttatttgtttcttGTGGCTTTTATCGCG AACTGGAAATTGACCATGACGTGTCTCTAATGAGATATAAGTCGTTCTCA AGTTGAATGATGGATTCTTTGAAACCCTTCACCACAGACAGTATAACAGA CGTTGACCAAGGAGGTTATGATGTTGACCTGGAAGATAAACTTGACTTAC CACCTGATTTGAAATGTACCATTTGTTGGAAATTGATGAAAGATCCAATG CAATTCCCTTGTGGTCATGGTACTTGTAATTATTGTCTACAATCGCTGGC TAAAAGCAGGTGGGTGGCTGATACCTTTGAAAGTTGCATTTTCAGTAATT TCCGAACTTTCATATCTTGTATTATTATGGAATCTTTGCGATTTGCTATG GAATCTTTAAAACTTGACATGTTGTTATGCCTGTTGTAATCTTTTCAAGA GTTCATTATTCTTTGCCTTCAGAATCTAATCCGAACGTTTATCCTCGATC ACGTAGGCGTGTTAGAGGTTTGAGAGGTCTTTTTACTGTTGACGTCTTAT AAATCTTGTCAACAAATATCGAGCGCAAAATTTGAAGTGCAAAATAAAGT TTCGACAACTCTTTTGCTAGTGAAACTGGGAAGTTCAATTTGTTTATCAT TAGTCAAACATTGACAAAAAAGGTATCAAATAATTTCCTGTTCGTTTATT TTTAGCTCATCAAAAAGTCGACCGCTGTGTCCACAATGTAGAAGTCCGAT ACCAATCAAAAAAGTGAGTAAATATTTCACATGaagggtttttttttcaa cctagCAAGTTTTGATTTTCACTGACTTCaaatattatgaaaatattCTG TTTTTTTACACTGGCCTTGAATATTAccaaatacagttgactctcgctta ttcgaaggGGCATccaatttgttcgaattacagggaGGTTAGTATTAGAG GGGTTTTATGAAAGGGTTTTTACTTTGAAGGGTGGGACAAGGAATGTtgt ttttggttgaaatttaaaaatttgaatatggggggggggcggaggatata aatttttttataaatttaccccccccccNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATTTTGACCCCCGGAAATC AGGTCTAACCCCTCCCCCctcccggacaagcatcagttgaccctcTGGAT ATTAAATATTACCCTCAAACGGAGCAAAATCACCCGAAAACAGAGCAAGT TTTTAACCCCCcgaacaaggcaaattttgtagatttttttacTACCACAG GACATTATATCCTCCACTCCACCCCCCACCTCCCATGTACgaatattttc tggaagagcccattttagaaagatttgaatCGTTTGTTCGAATATGCGAG AGTCAATCTTTACGGGTTGCTTTAAGAATTCCAGTTTAAATATTACTatc aatttcgtttttttctaggCACTGAAAAACGTAATGTTGAAGCGATTCAT CGAAGCACTTCGTGTCAAATGTATGAACTCTTGGCGAGGGTGTACTTGGG TCGGAGAAGTCAGCAACATTAAGGTTGGTTAAAATGAAATAACGTGGCAA TGATAATGTCTGAAGTGTGaggaaattcaaaattctaTCATTTTAGTACT TTCTACTTAGTTTATCCATACGTAATCCTTAAATCAATTTAAAGTATATT TTGGGAAATTTCTTCATAAGTTTTTTATAAAAGGTAGTATCAATCACAAG TAAGATATCGGCCCTGGAAAATCAAGGTGTATAATGGAATTTTCATGATA AAGTCTATTGGTAATAGACGAAATTCCAGAGATGGGTCTTGTaaactttg aaatgaaaatcCAAGGGGGTACCCCCTTCTACCCCATCTAAAACTTCAAG ACAACTTGCTAAAATGTAAGCAGAAGACGTCCGTCCCATCCAAAATTGAC CTCTTTAACATTGGGAGTATAACAATTATATATTTCTTCTGCTGTAGGAT CATTCGTGTGATTATGAAATGACGAAATGTACAAATGCTGGTTGTGGTGC AGAAATCGAAAAGAAATCTTTACCGGATCATCTGTTAAAATGCAATGTGA GTATATATGTTTCCTTTTACTTCTTGATAACGAGGTCATTTTTGTGGTTT GTTGATATGTCTTGTTACTGTCCTTTGGATAAAACTGTAAAATGTCGTAG ATCTGGTATGGGTAACCTATAGAAATAGACTAAACCAATGAAATCGCATG TAGGAATATATCAAGATAGTCGAGGCTGTCAATTCGTTTTTGCTTAATGA AATATCTTATATTATAGGTAAAAGCCGAGGCCAGCAATTCAAATTATCTT ataaagtcttatttttattttgtaggtaaAAGCAGCCGAAACAGATGAAC TAAATCAGAAAGTCAAAGATCAATCTAAAGAGATTATAGATCTCAAAACG CAATTAACAGATTacgaaacattaaaaaaagatcatcaaaatctacagac agaacaacaaaacttacaaaattttaatcaatttctgCAAGCCAGAATAG ATGTACTGGAGACGGAGCAAAAGAAACGAGACAGGAGAATAACAAACTCA CCTATTACTATAGAAGATACTGAAAAGAAACCCTTCGTGACGCTGGAAGA TTTAGAGTGTATTGTTATCAGTGACGACGATGAGAAAAATGGTTTACCAG ATTGTGAAAATGCTCTACCACATTCCGTGCACTCTACAAACACTGATGCA AACGTTGACTCACATACCTTACACTCACCAAATGCTATTCCAGAGTCTCC AGAAAGGTTATCTACACCTTTTGCTGATATTGAAAGTATTATATCACGAA CCACTTTCAACCGTACTGATAGTGGTAATAGCTTTACATATTCAACGGCT GGCCCGTCTTCTTCGAATGATGTAAACGGGCTACCATATTCTTCACAGTA TTTCAACAATCTTTCAGTCTCTTCTCCTCTTCATATGAACAATCGTCCAC GTACACCGCAGTCACTGTATGAAAATAATAATGATAGTGGTAATAGCTTT ACACAATCATCaaatttaccacattcttcatcatttttcaaTCCATTCTC GTATCAAAATAGTATTGACACTGGTTCAACGTCTNACGGAGCAAAATCAC CCGAAAACAGAGCAAGTTTTTAACACCCcgaacaaggcaaattttgtaga tttttttacTACCACAGGACATTATATCCTCCACTCCACCCCCCACCTCC CATGTACGatcattttctggaagagcccattttagaaagatttgaaCCGT TTATTCGAATATGCGTGAGTCAATCTTTACGGGTTGCTTTAAGAATTCCA GTTTAAATATTACTATCAATTTTCGTTTTCCTAGGCACTGAAAAACGTAA TGTTGAAGCGATTCATCGAAGCACTTCGTGTCAAATGTATAAACTCTTGG CGAGGGTGTACTTGGGTCGGAGAAGTCAGCAACATAAAGGTTAGTTAAAA TGAAATAACGTGGCAATGATAATGTCTGTAGTGTGaggaaattcaaaatt ctaTCATTTCAGTACTTTCTACTTACTTTATCCATACGTAATCCTTAAAT CAATTTAAAGTATATTTTGGGAAATTTcttcataattttttataaaaggt aGTATCAATCACAAGTAAGATATCGGCCCTGGAAAATCAAGGTGTATAAT GGAATTTTCATGATAAAGTCTATTGGTAATAGACGAAATTCCAGAGATGG GTCTTGTaaactttgaaatgaaaatcCAAGGGGGTACCCCCTTCTACCCC ATCTAAAACTTCAAGACAACTTGCTAAAATGTAAGCAGAAGACGTCCGTC CCATCCAAAATTGACCTCTTTAACATTGGGAGTATAACAATTATATATTT CTTCTGCTGTAGGATCATTCGTGTGATTATGAAATGACGAAATGTACAAA TGCTGGTTGTGGTGCAGAAATCGAAAAGAAATCTTTACCGGATCATCTGT TAAAATGCAATGTGAGTATATATGTTTCCTTTTACTTCTTGATAACGAGG TCATTTTTGTGGTTTGTTGATATGTCTTGTTACTGTCCTTTGGATAAAAC TGTAAAATGTCGTAGATCTGGTATGGGTAACCTATAGAAATAGACTAAAC CAATGAAATCGCATGTAGGAATATATCAAGATAGTCGAGGCTGTCAATTC GTTTTTGCTTAATGAAATATCTTATATTATAGGTAAAAGCCGAGGCCAGC AATTCAAATTATCTTataaagtcttatttttattttgtaggtaaAAGCAG CCGAAACAGATGAACTAAATCAGAAAGTCAAAGATCAATCTAAAGAGATT ATAGATCTCAAAACGCAATTAACAGATTacgaaacattaaaaaaagatca tcaaaatctacagacagaacaacaaaacttacaaaattttaatcaatttc tgCAAGCCAGAATAGATGTACTGGAGACGGAGCAAAAGAAACGAGACAGG AGAATAACAAACTCACCTATTACTATAGAAGATACTGAAAAGAAACCCTT CGTGACGCTGGAAGATTTAGAGTGTATTGTTATCAGTGACGACGATGAGA AAAATGGTTTACCAGATTGTGAAAATGCTCTACCACATTCCGTGCACTCT ACAAACACTGATGCAAACGTTGACTCACATACCTTACACTCACCAAATGC TATTCCAGAGTCTCCAGAAAGGTTATCTACACCTTTTGCTGATATTGAAA GTATTATATCACGAACCACTTTCAACCGTACTGATAGTGGTAATAGCTTT ACATATTCAACGGCTGGCCCGTCTTCTTCGAATGATGTAAACGGGCTACC ATATTCTTCACAGTATTTCAACAATCTTTCAGTCTCTTCTCCTCTTCATA TGAACAATCGTCCACGTACACCGCAGTCACTGTATGAAAATAATAATGAT AGTGGTAATAGCTTTACACAATCATCaaatttaccacattcttcatcatt tttcaaTCCATTCTCGTATCAAAATAGTATTGACACTGGTTCAACGTCTC GTATTTTTTCTCCATACGATTTCAGTAATATTGGTgctaattttcaataa ttttcacgTGGATTCTTTAttgattttcactaaaaacatCATGACCATCA AATGGTCAATGATAGCTATTCTTGTGTTTTTAAAAGCATTGTATTATAAC acgtttatatttttttgtaaatatttatattaaaaCGATAGTAAAAAACT AACAGATCTTCTTTATTCGGTTAATAAAACATGTGGATCGCGCCCGTCAT CAGTTTTATGATACCCATCATAGTCCTTCTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002036TCONS_00002036Clytia hemisphaericatranscript
TCONS_00002037TCONS_00002037Clytia hemisphaericatranscript
TCONS_00002038TCONS_00002038Clytia hemisphaericatranscript
TCONS_00002039TCONS_00002039Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002037-proteinTCONS_00002037-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:406111..415142 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.28 4.35 1.85 1.48 6.43 4.67 6.7 7.03 6.43 6.36 7.41 6.53 6.77 7.91 6.62 6.53 6.55 7.1 8.1 9.07 5.22 5.14 5.71 5.88 10.66 9.89 16.32 16.61 9.23 8.8