TCONS_00001637 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001637
Unique NameTCONS_00001637
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2620

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001637 ID=TCONS_00001637|Name=TCONS_00001637|organism=Clytia hemisphaerica|type=transcript|length=2620bp
caGTACAGTATTACAGTAAAtgatgaataagagaggtggtCGCCAgcgaa
aaaacaaacaaaatcagACGAAATGTCAATTTTGTGATTTGTTTGTGGAC
AGTATAGAAGACCACCAATGTCCTCATATGGCACCTGTTGGGGGTGTTAA
TGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGATGCCTTAATTGATG
AAGGTGTTGAAATCATCTTCACATGGCTCGAAGATCATAAAATCGATGGA
AAAATGAATTCAATTGATTTACTTATCATGGATGACAGAGTTCAACTCAA
GCGAAGCAACGACGGATCCTTCAGATCAGACAagaagaaaattccttttg
gcACAATACGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTA
AAAGAAATTGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGA
CCGAGATAAGTACATCGTTTTCCTTGGAAGAACTGGAGTTGGTAAATCAA
CGTATATCAATTCTTTCGTCAATTATCAACAACACGGAACCTTCCAGAAT
GCGAATGATGGTCCTTTATACGTTCCAATATCCACAAGATTCAACCATTC
ATACCAAACAGATGATAGTGATGAAATTGAAGATCAGATAGTGACTTTGC
AAGTTCCAGAACCATCCAAAAAGACatctgaaacaaaaacaaaatctgaA
CCTGAAAACGAATGCGATGAATATGCACAAGGTGACGTGACGTCATCAGC
TACAAAATTGCCAAGAGCTTATGAAGTCCAACCGAAAGATGTGAACCATA
AGATTATCTTGATTGATACTCCAGGTGTTCAATCGACCACTGGCAAGCTG
ACTGATGAGGAAGCTTCAAAAGATACAGATAAAGAGAATAGCAAATTTAT
CATCAATCATTTAGCACAAGTTCCCTTTGTTAGTGCTTTCGTTATCCTCT
TAAAGCCAGACGAGGAAAAGTTGGACATGTCTTTTGTGGCGACCATCAAA
TCATTATTCAGTCAACTTGATGAGTCAGCAAAGAATAATGTTGTTTTTGC
GATCACGCATGCCAACAACTGCTGTTTCCGTGATACCAAAACGACAGTGG
TGCTGAAAAAGACTTTTGATCAGATTGGCTTGGAGATCAAAATCACCAGA
CGCAATATATTCCATTTCGATAATTCACCATTCCGTTACCTAGCAACCAA
GAAGCTTGGTTACCAACCAATCGAAGACGAGGCTGATATGAAAAAATGCT
GGCATAAAACAGTTGAGAATTGTGAAGCAATGATTACATATATTGATGCA
TTGGAACCACACGATACCAGCACCTTGGTTGCTATTGACGACACAAAAAT
GATGATCAACAGTACTATAAAACCATTGGTCAAAATCAGCAAGTTGAaca
aggaaaatattttcacgTTTGAAAGTATTATCAAAGAAGAAGCGAATAAA
GAAGGTAGCGAGGTGATACAAGCTGCTTTGAAAACATTGGTTTACTAGAA
AGTCGACAAGCCCTTCACTGCATGTACCAATATCGAATGCCATCAAAAGC
AACAATTTAAACCAAAAGCTGAACCTAAAGAAATCATAAAGAACATGTAC
AACAAAATTTGCTGTGAGAGCTGTACTGTACCTTTTGTGACCCAAGAAAC
AACAGGAAGTTGGATGTTGTATTTCTGCCGAACCATGAATTGGTCTGGCT
ATTGTAAAGTATGCAAACACAAGTTATCAGAGCACCAGCATGTGGCTTAT
GATCTAGCAGAAGTCGAAAAACGGTTCAAAATGAAGGTTGAAGATTTGCC
AGAAAAGCTGAAGAAGCTTAAAGAAGAATTGAACATCACCATTGATGCTC
TTGTCTATTTCACCAAGTTTCTAGACTGTCGTTGCATGTTCAAAGAAGAT
GATTTGGCTATTAGGTACATAAACGAAGAAGTCAAAGCATCGTGTCAACA
ACGTAATGAGCAAGCAAACACCGTGACAGAATTGCAATCGAAATGGGACG
AACTTTATgccaaatgttttgaaaagcaTAACCAACATATGAAATCGTTG
CTAGATTCTAAGCTGTTAGAAGAAGCGTGCAAAGATCTAAACATGAATGA
CGTCCCAGACTCCCACAAAAGGGGAGAAGCTTTTACTGAAGAAGTTAAGC
GTAAAGCAGACGAAGAAAGTCGAATCGATCCAGAATTTAAAGCTCTCAAA
GATCAACTGTAAGTGGCAGAGAAGAGTCGCAAAGAGAAGGAAATTTTGGC
AGCCGGATTGGAAGATATGCAGGAAAAATTCAATGAGAAAATGTCAGTAA
ATAAAGTCGAGAAAAAGGATCTAACACCCAAAAATGtcgaaatcaaaatc
aaagagCTTTGCCACTTAGATGAAAATGGTGTAACTTTTCAGAAATGTTA
TGCTAATATCAAGAATGCTAAAAATAAAGGTGTGCTGAGACCAAAATCAT
TAGTCAACTCACGNAATGTTATGCTAATATCAAGAATGCTAAAAATAAAG
GCGTGCTGAGACCAAAATCATTAGTCAACTCACGTGACATACCAAAACAA
ACCATGAAAAAAGAGCCAGTTGAAGCTTAGAATGCATGGCAACTTGCAAT
AATAAAGTGACTAACCCTTG
Run BLAST on NCBI

protein sequence of TCONS_00001637-protein

>TCONS_00001637-protein ID=TCONS_00001637-protein|Name=TCONS_00001637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
MMNKRGGRQRKNKQNQTKCQFCDLFVDSIEDHQCPHMAPVGGVNGFGVGG
GAQNGDALIDEGVEIIFTWLEDHKIDGKMNSIDLLIMDDRVQLKRSNDGS
FRSDKKKIPFGTIRRGRLLIGETHFCLKEIVTNQHSNVVPIKIDRDKYIV
FLGRTGVGKSTYINSFVNYQQHGTFQNANDGPLYVPISTRFNHSYQTDDS
DEIEDQIVTLQVPEPSKKTSETKTKSEPENECDEYAQGDVTSSATKLPRA
YEVQPKDVNHKIILIDTPGVQSTTGKLTDEEASKDTDKENSKFIINHLAQ
VPFVSAFVILLKPDEEKLDMSFVATIKSLFSQLDESAKNNVVFAITHANN
CCFRDTKTTVVLKKTFDQIGLEIKITRRNIFHFDNSPFRYLATKKLGYQP
IEDEADMKKCWHKTVENCEAMITYIDALEPHDTSTLVAIDDTKMMINSTI
KPLVKISKLNKENIFTFESIIKEEANKEGSEVIQAALKTLVY
Run BLAST on NCBI

transcript from alignment at sc0000011:74637..84132-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001637 ID=TCONS_00001637|Name=TCONS_00001637|organism=Clytia hemisphaerica|type=transcript|length=9496bp|location=Sequence derived from alignment at sc0000011:74637..84132- (Clytia hemisphaerica)
CAGTACAGTATTACAGTAAATGATGAATAAGAGAGGTGGTCGCCAGCGAA AAAACAAACAAAATCAGACGAAATGTCAATTTTGTGATTTGTTTGTGGAC AGTATAGAAGACCACCAATGTCCTCATATGGCACCTGTTGGGGGTGTTAA TGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGATGCCTTAATTGATG AAGGTATTTATATAACTATTTATATAAGGTATATTATTCCATTCACCTCT GGAAAAAAGGTTCATTTTCCGACCTTTCCTCGACAGGGAAGACTAAAGAT AGGTCTGGTCCTTATGGATACTGGAAACTGACTCCATTTGATTGAAAATG CATGATAATATTTTATTGAGTGAATTGAAATGAAATATACCCAAGATTTG GTGAATAAAGAGTCAAAATGGACTTTGCGCAAGCCAATTACATGATTTTT GTTGGTTTGGCGCAACACGAAATAGGAAAAAATGCAAGGATTTTGGACGT TTTTGATGATTACATTGGTTATGTGATATAAATTATGGATTGTTTTACAA ATACAGTTAAAAGGCTGAAAAAACTAGGTTAAAAAATACATTTTGTCATA AGATATAACGTTTTCTTTACTTTTTCGCCCTTTTCCCGGAAACACGTTTC CGGGGGTTTACTAACACCTTGACGGATATTTCTCAGGATTGGAAAGTGCT AGCTTCATGAAATTTTCAGGGAAGGTTTCTTTCACCATTTGCCAGAAAAC TAATGAAAAATTTTCATGAAAAAATGTTCCACTCCTTCAAACTCAAAAAA ATTACATATATTAGATTCCGGCCCCCTGGAAAAAAAGTTTCAAAAAATTT TTTTTTTAGTTTTCTTTGTTTTCTCATTACAAAGCTGTGTGCCAAAAATC TTTAATTGAAATGATCTAGAACTCTAGAAAAGCCTGTTGAAAGAAAAATA TAGAACCAATATTACCCCCGTCTTGCTATTTTTAGAATTTCTTTTTCATT TTTGACATTTTTAATAGTTGTGTTACATTTATGGAAAGTTTCATCAATAT ATCTTTGATATTTCAAAAGTTATGACTAAAAAAGTAAAAAAATGACTTTT TCCATTTCTCAGGTAACTACCACCTTAAGCCAGAAATGGATTAGGTAGTC ATAGGTAATAAAAAGCTTAACTTTGACTTTTTAGGTGTTGAAATCATCTT CACATGGCTCGAAGATCATAAAATCGATGGAAAAATGAATTCAATTGATT TACTTATCATGGTAGGCTGCTTACATAACAATTTTTATCTTTTTCAATGA TTTTGGTGCAAGGCACGACCTCATTAAATTACATACAGGGTTTCCATAAT ATAGAACAAAAAGAATTTCATTTTGACACACCACCTTTGAATTCAAGGAT TTATTCTACACCAATTCAATTTCCTCTTTATGTAAACCTTTGATCGGTAA AACTAAGGCTACACTTATGTTTTTTTCCAGGCGACTGTAAAGCAATTGTT TTAAAACATTTTGTATTGCAGCGGCCTAGAAAAAAATATTGGTGCAACCC TAGCTTAACCCAAGAAGTACTTGATGTCAAAAATTTCTAGAGTTGGAATT CTGTGAAATCATAACTTTAGCAATACCTGACTGGGTATTAGTCTGAAATT GAATCAAATTTCTTTGGAAAATGTATCGTCCTTTCTAAGCTTAGATCGTC AATCTTATTGAAACAATTGCATCCATCAAATTTTCACGCACCTTTTCAAA AGTAGTGGATGTCATATTTCACACCCTTTGTCACAGACTCGCCCCACTGT GAAATTGGGCAAAAATTTCGTCCCCGGTGGGAAAATACCTTGGATTTTCA GCCCCACTGGGAATTTGATTTTTATTTCGTCCCCATTTGTCGAAATCCAA TGTAAAAAAATTTTACTCCAAAACCACCCCACTGGATTTTTTAACTTTGG AACAATAAAATTTCTTAATAAAATTTTTTATCCCCACTGAGGAAAAAGTT CCACCGGGGATGTGAGACAGGGGTGCTATTTCATCTTACCAGGGAGTGGT AAGTGTAAGCATAGTATAAGAAAGTCGCGGCTTTCTTATACTATGGTGTA AGTCTTCTTCTAAAGCTGACGTCATATTTTAAAATAAGTCCTCCAAATTT AATTATTTTTTTATTTGGATTTCAGGATGACAGAGTTCAACTCAAGCGAA GCAACGACGGATCCTTCAGATCAGACAAGAAGAAAATTCCTTTTGGCACA ATACGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTAAAAGA AATTGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGACCGAG GTGAGCCATTCCTCATTGAAAGTAAACCCCTGCCTCACAGCCCAAGTGGA AATTTTTACCACGCAGTGAGGAATAAAATATCTATCGATAGTGAAATTCT ATTGCGTAAAGCTCAAAAAATCCAGTAAGGATGATTAATTGTCCAAGTTT TTTCAACGAATTTCGAATGGGATGAAATCAAAGTCAATTTGTCAGTTAGG CATAGATTGTAGGATATTTTTCCCACCAGAAACGACATATTTTGGCCAAA TTTTCCAGTGGATCGGGGGTCCCATCGGGTTTAGGACAGAGTTTTAAAAG TAGATAAACCCATGTTTATCATAAATTTTCCCTCAATTGACAGACAAGAT TGTATCAAAGAGTAAAATAATTAATTTTTACCTGAATTATGACACTTGGA ATTCCATTAAACTGAACCAATTGCGTCAATTCAGCCAAGGCATCTTGTTT TCTTAAAGGACGTGGACATTTCTGAAGAAAGAGAAAGATGTAGGTTGTAT GTAAAATGTGTTTACAAACTTTTTCTCCATTTTAAGATAAGTACATCGTT TTCCTTGGAAGAACTGGAGTTGGTAAATCAACGTATATCAATTCTTTCGT CAATTATCAACAACACGGAACCTTCCAGAATGCGAATGATGGTCCTTTAT ACGTTCCAATATCCACAAGATTCAACCATTCATACCAAACAGATGATAGT GATGAAATTGAAGATCAGATAGTGACTTTGCAAGTTCCAGAACCATCCAA AAAGACATCTGAAACAAAAACAAAATCTGAACCTGAAAACGAATGCGATG AATATGCACAAGGTGACGTGACGTCATCAGCTACAAAATTGCCAAGAGCT TATGAAGTCCAACCGAAAGATGTGAACCATAAGATTATCTTGATTGATAC TCCAGGTGTTCAATCGACCACTGGCAAGCTGACTGATGAGGAAGCTTCAA AAGATACAGATAAAGAGAATAGCAAATTTATCATCAATCATTTAGCACAA GTTCCCTTTGTTAGTGCTTTCGTTATCCTCTTAAAGCCAGACGAGGAAAA GTTGGACATGTCTTTTGTGGCGACCATCAAATCATTATTCAGTCAACTTG ATGAGTCAGCAAAGAATAATGTTGTTTTTGCGATCACGCATGCCAACAAC TGCTGTTTCCGTGATACCAAAACGACAGTGGTGCTGAAAAAGACTTTTGA TCAGATTGGCTTGGAGATCAAAATCACCAGACGCAATATATTCCATTTCG ATAATTCACCATTCCGTTACCTAGCAACCAAGAAGCTTGGTTACCAACCA ATCGAAGACGAGGCTGATATGAAAAAATGCTGGCATAAAACAGTTGAGAA TTGTGAAGCAATGATTACATATATTGATGCATTGGAACCACACGATACCA GCACCTTGGTTGCTATTGACGACACAAAAATGATGATCAACAGTACTATA AAACCATTGGTCAAAATCAGCAAGTTGAACAAGGAAAATATTTTCACGTT TGAAAGTATTATCAAAGAAGAAGCGAATAAAGAAGGTAGCGAGGTGATAC AAGCTGCTTTGAAAACATTGGTTTACTAGAAAGTCGACAAGCCCTTCACT GCATGTACCAATATCGAATGCCATCAAAAGCAACAATTTAAACCAAAAGC TGAACCTAAAGAAATCATAAAGAACATGTACAACAAAATTTGCTGTGAGA GCTGTACTGTACCTTTTGTGACCCAAGAAACAACAGGAAGTTGGATGTTG TATTTCTGCCGAACCATGAATTGGTCTGGCTATTGTAAAGTATGCAAACA CAAGTTATCAGAGCACCAGCATGTGGCTTATGATCTAGCAGAAGTCGAAA AACGGTTCAAAATGAAGGTTGAAGATTTGCCAGAAAAGCTGAAGAAGCTT AAAGAAGAATTGAACATCACCATTGATGCTCTTGTCTATTTCACCAAGTT TCTAGACTGTCGTTGCATGTTCAAAGAAGATGATTTGGCTATTAGGTAAT TTTATCAATATATCACCAAACAAAGATACTAAAACTATTTCTCTATGAGC CCGGGGCTAAAAGTAGTCGCTGGACAAGTCTCTCTATGGGTTATAAAAAC AACAAAAAGTAAAAACAGTCTCTCCAAGGTTCACTATTTTCCCATTGTTG GCTTGAATTAAGGGTACTAAAACCGTGATAAATCAGATCCCTGGTCGGTT TTCGGAGGTCCAGTTCACACATAACCGACATTCCCCAACGCTTAACCCTA ATACATTACCGGCTTACGAGAGCTTTCCCAGTCTAGATACATTTGATTTT GATTCTTAGGTACATAAACGAAGAAGTCAAAGCATCGTGTCAACAACGTA ATGAGCAAGCAAACACCGTGACAGAATTGCAATCGAAATGGGACGAACTT TATGCCAAATGTTTTGAAAAGCATAACCAACATATGAAATCGTTGCTAGA TTCTAAGCTGTTAGAAGAAGCGTGCAAAGATCTAAACATGAATGACGTCC CAGACTCCCACAAAAGGGGAGAAGGTAGTGATTATCTTTTCAACGGTGTT TTAATCACAAAATTTGATGTATATATCAACATGAAAAAAATCTAAGTGAT TGTGAAATATTCCCTCATAAAACCTGGAGAATTCAAGGAGACATTTCTAG AGAACAACTGGGGTCCCTTAAGAAGAGGGTAGAAATCCTGTAGGTCTGTC CTGCAAAAATAGCTTCCTCAACATGGGTGGGATGAAATCCAGTTATAAAG TACCGTATTAATTCAAACAAGAAGCCCAAGGGCATGAAGGCCCAGCATTA AAAGTTTTGTTTCTAAATAAGAGTGATAAAGTTTGCTTAAAATCATCAAT TTTAATTTACAAGCTTTTTTATATTGAATTGGCACGAATGTGGAGCAGGA TTGGTCAGAAAGAGGAAAACATTTTTTTGCTTATATTAGCACAATATAAC AAACTGATATGAAACATGTGTCTAACATGAAACGGGAACACTTATTTATG TAAAAATAAAACTTTTGAAAAATCTTTAACAAACATGATAACGCTCTAAC TAAAGGAAGCAAAAACAAATGATAAAAAGTAAAATTAAAAAGAAACTAGC CTCGAAAATTTTTTCCTGCAACCACAGCGGCTGCAACCACAGCGGNNCAA GATGGTGTCTGACAGGGTGGCGCCGATAAGCCCTTTTGACCGTTTTGGAC TGAAATGGCTTAATTTTCTTAGATAAATGTATCTATAATGTCCTTATTGT TTATTTTTTTAACCATTATGATATGCTGAAATTGTGTACAAAATTTGAGC TTTTTAGTTCAATTTTACCAGGAGAAACAGGCAAAAGAAACTTGCAAAAT CAAACAAAACCGCAATACAAGCTGCAACATGGAGAATGCTCAATATGCCT TGCGACAACTTTTTCAAAACAGTAGATTTGAGCCCGGCTCGAACCACTAA AGTTATTTGTCAGTGATTCTGAGCCCGGCATGTGCTACCAAGCCGCTGCA AAAATTTGAAATTACAAACTCCTACCCCTTCCGTGAGATTGGGTAACTTG CATCAGTGAAGGCTAACATGCATAGCCCTCAAATGACTGACCAATCAAAG CAGCAAAATTTCAAAACAAATGAACTACGCAGCTTCGCTCGCAGCTCTAC TCTACCATTTTTGTTTTGATTTCACTTTGCTATGCATGNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNATCTAGCAATTCCTTTGTTTTTGAGTGATATACTTTTCAAAATT AAGCGGTAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAAGCGGG TCGCCCAAGGCCGTGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTAC CAAAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATATGGTATAC AGTACAAAAAATTTACTGTGGGAAATTTGAATTTATCGCTGTCCTCACTT ACGAAAATAAAAACCATATTTCTGAACTTGCGTTTTCTCTTAAAGAGTGT GACCGTTGAAAGAATTTGTTTGGTTTTCAACTGTTGAACGANTATTGTTT ATTTTTTTAATCATTATGATATGCTGAAATTGTGTACAAAATTTGAGCTT TTTAGTTCAATTTTACCAGGAGAAACAGGCAAAAAAAACTTGCAAAATCA GACAAATCCGCAATACAAGCTGCAACATGGAAAATGCTCAAAATGCCTTG CGACAACTTTTTCAAAACCAGTAGATTTGAACCCGGCTCAAACCACCAAA GTTATTTGTCAGTGATTCTGAGCCCGGCATGTGCTACCAAGCCGCTGCAA AAATTTGAAATTACAAACTCCTACCCCTACCGTGAGATCGNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATTTCGTTCGATTACGAT TATGTACGATGAGTTTGATTGCGATTAAATTAAATTGGATCACTCTGTTA GAGCTTCTTAGCGTGGGCGGCCGAGCGCTTAAGTACCCGAAAAAAATCTA ATATAATTGAATCATTTCAATCTAACGTAATTGAATACAATCGAACGTAA TCAAAGCAATCGAACAGCAAATCCTGGGTAGTATTCGATTGCGATTCGAT TGCGTTTGATTGTATTCAATTACGTTCGACAATCGAATTGCAATTATTCG ATTGCGTTCAATTCGTTCGATTGACACCGTCTGGTGCGTGATGTAAACTA AAAAAACTGAGCATGATCAAGACTCCTTTAAAAAAGCTCAACAAATATAA AATTTCACCATAATTTTATGCAGAAAAAGTATCAAAATATCCAACAAGAA CAATACAAATAGAGGCTATTCTAGTCAACCTCTTGCTGTTTGAATAAATT TTTTTGTCGAATATAAAAGCCTGAACACACATTTCGCACACGTTAAGTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTGAGAGAGGA CAGAAAAACAGAACACGGCACGGACTGCGGACAGACAGGACAGGACAGAC AGACACACGGAAAGTTCCTCTTGAAAGGCCCCTTCGCTAGGCGCTGGGCC AATAAACGCCCCCTTCTTATAAACGCCCCTCATCGAATAAACGCCCCTCC TAAAGGAAAAATTTTCAATACACGCCCTCTAGGAAGGCAGGCCGTTTATT TGAAACAAGTAGCTGTTAGGGAGAATCATATGGAGGAAAATTTAAAATAT GTGTTGATAATTGTATTTTTGAATCATTCAAACTAGTTTGACTCATTTTA AACATATCTAAAATGAAATTTTTCAACTGAAGAAAAACGAGAAGGCAAAA CAAGGTTCCAATTTACTTTATTAAAGTGACCTTGGTTGAATATTATTTTT TATTCGAACTAATACGGTAGGCCAATCAACATTATAGAAATCCACTTATC TTTAGCTTTTACTGAAGAAGTTAAGCGTAAAGCAGACGAAGAAAGTCGAA TCGATCCAGAATTTAAAGCTCTCAAAGATCAACTGTAAGTGGCAGAGAAG AGTCGCAAAGAGAAGGAAATTTTGGCAGCCGGATTGGAAGATATGCAGGA AAAATTCAATGAGAAAATGTCAGTAAATAAAGTCGAGAAAAAGGATCTAA CACCCAAAAATGTCGAAATCAAAATCAAAGAGCTTTGCCACTTAGATGAA AATGGTGTAACTTTTCAGAAATGTTATGCTAATATCAAGAATGCTAAAAA TAAAGGTGTGCTGAGACCAAAATCATTAGTCAACTCACGNAATGTTATGC TAATATCAAGAATGCTAAAAATAAAGGCGTGCTGAGACCAAAATCATTAG TCAACTCACGTGACATACCAAAACAAACCATGAAAAAAGAGCCAGTTGAA GCTTAGAATGCATGGCAACTTGCAATAATAAAGTGACTAACCCTTG

Coding sequence (CDS) from alignment at sc0000011:74637..84132-

>TCONS_00001637 ID=TCONS_00001637|Name=TCONS_00001637|organism=Clytia hemisphaerica|type=CDS|length=5916bp|location=Sequence derived from alignment at sc0000011:74637..84132- (Clytia hemisphaerica)
ATAAGTACATCGTTTTCCTTGGAAGAACTGGAGTTGGTAAATCAACGTAT
ATCAATTCTTTCGTCAATTATCAACAACACGGAACCTTCCAGAATGCGAA
TGATGGTCCTTTATACGTTCCAATATCCACAAGATTCAACCATTCATACC
AAACAGATGATAGTGATGAAATTGAAGATCAGATAGTGACTTTGCAAGTT
CCAGAACCATCCAAAAAGACATCTGAAACAAAAACAAAATCTGAACCTGA
AAACGAATGCGATGAATATGCACAAGGTGACGTGACGTCATCAGCTACAA
AATTGCCAAGAGCTTATGAAGTCCAACCGAAAGATGTGAACCATAAGATT
ATCTTGATTGATACTCCAGGTGTTCAATCGACCACTGGCAAGCTGACTGA
TGAGGAAGCTTCAAAAGATACAGATAAAGAGAATAGCAAATTTATCATCA
ATCATTTAGCACAAGTTCCCTTTGTTAGTGCTTTCGTTATCCTCTTAAAG
CCAGACGAGGAAAAGTTGGACATGTCTTTTGTGGCGACCATCAAATCATT
ATTCAGTCAACTTGATGAGTCAGCAAAGAATAATGTTGTTTTTGCGATCA
CGCATGCCAACAACTGCTGTTTCCGTGATACCAAAACGACAGTGGTGCTG
AAAAAGACTTTTGATCAGATTGGCTTGGAGATCAAAATCACCAGACGCAA
TATATTCCATTTCGATAATTCACCATTCCGTTACCTAGCAACCAAGAAGC
TTGGTTACCAACCAATCGAAGACGAGGCTGATATGAAAAAATGCTGGCAT
AAAACAGTTGAGAATTGTGAAGCAATGATTACATATATTGATGCATTGGA
ACCACACGATACCAGCACCTTGGTTGCTATTGACGACACAAAAATGATGA
TCAACAGTACTATAAAACCATTGGTCAAAATCAGCAAGTTGAACAAGGAA
AATATTTTCACGTTTGAAAGTATTATCAAAGAAGAAGCGAATAAAGAAGG
TAGCGAGGTGATACAAGCTGCTTTGAAAACATTGGTTTACTAGGATGACA
GAGTTCAACTCAAGCGAAGCAACGACGGATCCTTCAGATCAGACAAGAAG
AAAATTCCTTTTGGCACAATACGCAGAGGCAGACTTTTGATTGGAGAGAC
ACATTTCTGCTTAAAAGAAATTGTGACCAATCAACATTCGAATGTAGTCC
CTATAAAAATCGACCGAGGTGTTGAAATCATCTTCACATGGCTCGAAGAT
CATAAAATCGATGGAAAAATGAATTCAATTGATTTACTTATCATGATGAT
GAATAAGAGAGGTGGTCGCCAGCGAAAAAACAAACAAAATCAGACGAAAT
GTCAATTTTGTGATTTGTTTGTGGACAGTATAGAAGACCACCAATGTCCT
CATATGGCACCTGTTGGGGGTGTTAATGGTTTTGGTGTGGGTGGAGGTGC
TCAAAATGGCGATGCCTTAATTGATGAAGATAAGTACATCGTTTTCCTTG
GAAGAACTGGAGTTGGTAAATCAACGTATATCAATTCTTTCGTCAATTAT
CAACAACACGGAACCTTCCAGAATGCGAATGATGGTCCTTTATACGTTCC
AATATCCACAAGATTCAACCATTCATACCAAACAGATGATAGTGATGAAA
TTGAAGATCAGATAGTGACTTTGCAAGTTCCAGAACCATCCAAAAAGACA
TCTGAAACAAAAACAAAATCTGAACCTGAAAACGAATGCGATGAATATGC
ACAAGGTGACGTGACGTCATCAGCTACAAAATTGCCAAGAGCTTATGAAG
TCCAACCGAAAGATGTGAACCATAAGATTATCTTGATTGATACTCCAGGT
GTTCAATCGACCACTGGCAAGCTGACTGATGAGGAAGCTTCAAAAGATAC
AGATAAAGAGAATAGCAAATTTATCATCAATCATTTAGCACAAGTTCCCT
TTGTTAGTGCTTTCGTTATCCTCTTAAAGCCAGACGAGGAAAAGTTGGAC
ATGTCTTTTGTGGCGACCATCAAATCATTATTCAGTCAACTTGATGAGTC
AGCAAAGAATAATGTTGTTTTTGCGATCACGCATGCCAACAACTGCTGTT
TCCGTGATACCAAAACGACAGTGGTGCTGAAAAAGACTTTTGATCAGATT
GGCTTGGAGATCAAAATCACCAGACGCAATATATTCCATTTCGATAATTC
ACCATTCCGTTACCTAGCAACCAAGAAGCTTGGTTACCAACCAATCGAAG
ACGAGGCTGATATGAAAAAATGCTGGCATAAAACAGTTGAGAATTGTGAA
GCAATGATTACATATATTGATGCATTGGAACCACACGATACCAGCACCTT
GGTTGCTATTGACGACACAAAAATGATGATCAACAGTACTATAAAACCAT
TGGTCAAAATCAGCAAGTTGAACAAGGAAAATATTTTCACGTTTGAAAGT
ATTATCAAAGAAGAAGCGAATAAAGAAGGTAGCGAGGTGATACAAGCTGC
TTTGAAAACATTGGTTTACTAGGATGACAGAGTTCAACTCAAGCGAAGCA
ACGACGGATCCTTCAGATCAGACAAGAAGAAAATTCCTTTTGGCACAATA
CGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTAAAAGAAAT
TGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGACCGAGGTG
TTGAAATCATCTTCACATGGCTCGAAGATCATAAAATCGATGGAAAAATG
AATTCAATTGATTTACTTATCATGATGATGAATAAGAGAGGTGGTCGCCA
GCGAAAAAACAAACAAAATCAGACGAAATGTCAATTTTGTGATTTGTTTG
TGGACAGTATAGAAGACCACCAATGTCCTCATATGGCACCTGTTGGGGGT
GTTAATGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGATGCCTTAAT
TGATGAAGATAAGTACATCGTTTTCCTTGGAAGAACTGGAGTTGGTAAAT
CAACGTATATCAATTCTTTCGTCAATTATCAACAACACGGAACCTTCCAG
AATGCGAATGATGGTCCTTTATACGTTCCAATATCCACAAGATTCAACCA
TTCATACCAAACAGATGATAGTGATGAAATTGAAGATCAGATAGTGACTT
TGCAAGTTCCAGAACCATCCAAAAAGACATCTGAAACAAAAACAAAATCT
GAACCTGAAAACGAATGCGATGAATATGCACAAGGTGACGTGACGTCATC
AGCTACAAAATTGCCAAGAGCTTATGAAGTCCAACCGAAAGATGTGAACC
ATAAGATTATCTTGATTGATACTCCAGGTGTTCAATCGACCACTGGCAAG
CTGACTGATGAGGAAGCTTCAAAAGATACAGATAAAGAGAATAGCAAATT
TATCATCAATCATTTAGCACAAGTTCCCTTTGTTAGTGCTTTCGTTATCC
TCTTAAAGCCAGACGAGGAAAAGTTGGACATGTCTTTTGTGGCGACCATC
AAATCATTATTCAGTCAACTTGATGAGTCAGCAAAGAATAATGTTGTTTT
TGCGATCACGCATGCCAACAACTGCTGTTTCCGTGATACCAAAACGACAG
TGGTGCTGAAAAAGACTTTTGATCAGATTGGCTTGGAGATCAAAATCACC
AGACGCAATATATTCCATTTCGATAATTCACCATTCCGTTACCTAGCAAC
CAAGAAGCTTGGTTACCAACCAATCGAAGACGAGGCTGATATGAAAAAAT
GCTGGCATAAAACAGTTGAGAATTGTGAAGCAATGATTACATATATTGAT
GCATTGGAACCACACGATACCAGCACCTTGGTTGCTATTGACGACACAAA
AATGATGATCAACAGTACTATAAAACCATTGGTCAAAATCAGCAAGTTGA
ACAAGGAAAATATTTTCACGTTTGAAAGTATTATCAAAGAAGAAGCGAAT
AAAGAAGGTAGCGAGGTGATACAAGCTGCTTTGAAAACATTGGTTTACTA
GGATGACAGAGTTCAACTCAAGCGAAGCAACGACGGATCCTTCAGATCAG
ACAAGAAGAAAATTCCTTTTGGCACAATACGCAGAGGCAGACTTTTGATT
GGAGAGACACATTTCTGCTTAAAAGAAATTGTGACCAATCAACATTCGAA
TGTAGTCCCTATAAAAATCGACCGAGGTGTTGAAATCATCTTCACATGGC
TCGAAGATCATAAAATCGATGGAAAAATGAATTCAATTGATTTACTTATC
ATGATGATGAATAAGAGAGGTGGTCGCCAGCGAAAAAACAAACAAAATCA
GACGAAATGTCAATTTTGTGATTTGTTTGTGGACAGTATAGAAGACCACC
AATGTCCTCATATGGCACCTGTTGGGGGTGTTAATGGTTTTGGTGTGGGT
GGAGGTGCTCAAAATGGCGATGCCTTAATTGATGAAGATAAGTACATCGT
TTTCCTTGGAAGAACTGGAGTTGGTAAATCAACGTATATCAATTCTTTCG
TCAATTATCAACAACACGGAACCTTCCAGAATGCGAATGATGGTCCTTTA
TACGTTCCAATATCCACAAGATTCAACCATTCATACCAAACAGATGATAG
TGATGAAATTGAAGATCAGATAGTGACTTTGCAAGTTCCAGAACCATCCA
AAAAGACATCTGAAACAAAAACAAAATCTGAACCTGAAAACGAATGCGAT
GAATATGCACAAGGTGACGTGACGTCATCAGCTACAAAATTGCCAAGAGC
TTATGAAGTCCAACCGAAAGATGTGAACCATAAGATTATCTTGATTGATA
CTCCAGGTGTTCAATCGACCACTGGCAAGCTGACTGATGAGGAAGCTTCA
AAAGATACAGATAAAGAGAATAGCAAATTTATCATCAATCATTTAGCACA
AGTTCCCTTTGTTAGTGCTTTCGTTATCCTCTTAAAGCCAGACGAGGAAA
AGTTGGACATGTCTTTTGTGGCGACCATCAAATCATTATTCAGTCAACTT
GATGAGTCAGCAAAGAATAATGTTGTTTTTGCGATCACGCATGCCAACAA
CTGCTGTTTCCGTGATACCAAAACGACAGTGGTGCTGAAAAAGACTTTTG
ATCAGATTGGCTTGGAGATCAAAATCACCAGACGCAATATATTCCATTTC
GATAATTCACCATTCCGTTACCTAGCAACCAAGAAGCTTGGTTACCAACC
AATCGAAGACGAGGCTGATATGAAAAAATGCTGGCATAAAACAGTTGAGA
ATTGTGAAGCAATGATTACATATATTGATGCATTGGAACCACACGATACC
AGCACCTTGGTTGCTATTGACGACACAAAAATGATGATCAACAGTACTAT
AAAACCATTGGTCAAAATCAGCAAGTTGAACAAGGAAAATATTTTCACGT
TTGAAAGTATTATCAAAGAAGAAGCGAATAAAGAAGGTAGCGAGGTGATA
CAAGCTGCTTTGAAAACATTGGTTTACTAGGATGACAGAGTTCAACTCAA
GCGAAGCAACGACGGATCCTTCAGATCAGACAAGAAGAAAATTCCTTTTG
GCACAATACGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTA
AAAGAAATTGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGA
CCGAGGTGTTGAAATCATCTTCACATGGCTCGAAGATCATAAAATCGATG
GAAAAATGAATTCAATTGATTTACTTATCATGATGATGAATAAGAGAGGT
GGTCGCCAGCGAAAAAACAAACAAAATCAGACGAAATGTCAATTTTGTGA
TTTGTTTGTGGACAGTATAGAAGACCACCAATGTCCTCATATGGCACCTG
TTGGGGGTGTTAATGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGAT
GCCTTAATTGATGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000851XLOC_000851Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001637-exon-sc0000011-1575043694:83930..84132TCONS_00001637-exon-sc0000011-1575043694:83930..84132Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:82872..82948TCONS_00001637-exon-sc0000011-1575043694:82872..82948Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:81783..81957TCONS_00001637-exon-sc0000011-1575043694:81783..81957Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:79788..81246TCONS_00001637-exon-sc0000011-1575043694:79788..81246Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:79259..79473TCONS_00001637-exon-sc0000011-1575043694:79259..79473Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:74637..75127TCONS_00001637-exon-sc0000011-1575043694:74637..75127Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:83930..84132TCONS_00001637-exon-sc0000011-1510915933:83930..84132Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:82872..82948TCONS_00001637-exon-sc0000011-1510915933:82872..82948Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:81783..81957TCONS_00001637-exon-sc0000011-1510915933:81783..81957Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:79788..81246TCONS_00001637-exon-sc0000011-1510915933:79788..81246Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:79259..79473TCONS_00001637-exon-sc0000011-1510915933:79259..79473Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:74637..75127TCONS_00001637-exon-sc0000011-1510915933:74637..75127Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:83930..84132TCONS_00001637-exon-sc0000011-1491911889:83930..84132Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:82872..82948TCONS_00001637-exon-sc0000011-1491911889:82872..82948Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:81783..81957TCONS_00001637-exon-sc0000011-1491911889:81783..81957Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:79788..81246TCONS_00001637-exon-sc0000011-1491911889:79788..81246Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:79259..79473TCONS_00001637-exon-sc0000011-1491911889:79259..79473Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:74637..75127TCONS_00001637-exon-sc0000011-1491911889:74637..75127Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001637-proteinTCONS_00001637-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:74637..84132 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.357191 0.266576 0.643225 0.273728 0.682 2.13643 0.805043 0.842752 4.29924 5.45469 16.013 23.1436 2.39014 2.79979 7.25262 13.4079 0.312999 0 0.521514 0 1.22086 1.30751 1.24736 1.99682 0.163324 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001637 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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