TCONS_00001637 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001637
Unique NameTCONS_00001637
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2620

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001637 ID=TCONS_00001637|Name=TCONS_00001637|organism=Clytia hemisphaerica|type=transcript|length=2620bp
caGTACAGTATTACAGTAAAtgatgaataagagaggtggtCGCCAgcgaa
aaaacaaacaaaatcagACGAAATGTCAATTTTGTGATTTGTTTGTGGAC
AGTATAGAAGACCACCAATGTCCTCATATGGCACCTGTTGGGGGTGTTAA
TGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGATGCCTTAATTGATG
AAGGTGTTGAAATCATCTTCACATGGCTCGAAGATCATAAAATCGATGGA
AAAATGAATTCAATTGATTTACTTATCATGGATGACAGAGTTCAACTCAA
GCGAAGCAACGACGGATCCTTCAGATCAGACAagaagaaaattccttttg
gcACAATACGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTA
AAAGAAATTGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGA
CCGAGATAAGTACATCGTTTTCCTTGGAAGAACTGGAGTTGGTAAATCAA
CGTATATCAATTCTTTCGTCAATTATCAACAACACGGAACCTTCCAGAAT
GCGAATGATGGTCCTTTATACGTTCCAATATCCACAAGATTCAACCATTC
ATACCAAACAGATGATAGTGATGAAATTGAAGATCAGATAGTGACTTTGC
AAGTTCCAGAACCATCCAAAAAGACatctgaaacaaaaacaaaatctgaA
CCTGAAAACGAATGCGATGAATATGCACAAGGTGACGTGACGTCATCAGC
TACAAAATTGCCAAGAGCTTATGAAGTCCAACCGAAAGATGTGAACCATA
AGATTATCTTGATTGATACTCCAGGTGTTCAATCGACCACTGGCAAGCTG
ACTGATGAGGAAGCTTCAAAAGATACAGATAAAGAGAATAGCAAATTTAT
CATCAATCATTTAGCACAAGTTCCCTTTGTTAGTGCTTTCGTTATCCTCT
TAAAGCCAGACGAGGAAAAGTTGGACATGTCTTTTGTGGCGACCATCAAA
TCATTATTCAGTCAACTTGATGAGTCAGCAAAGAATAATGTTGTTTTTGC
GATCACGCATGCCAACAACTGCTGTTTCCGTGATACCAAAACGACAGTGG
TGCTGAAAAAGACTTTTGATCAGATTGGCTTGGAGATCAAAATCACCAGA
CGCAATATATTCCATTTCGATAATTCACCATTCCGTTACCTAGCAACCAA
GAAGCTTGGTTACCAACCAATCGAAGACGAGGCTGATATGAAAAAATGCT
GGCATAAAACAGTTGAGAATTGTGAAGCAATGATTACATATATTGATGCA
TTGGAACCACACGATACCAGCACCTTGGTTGCTATTGACGACACAAAAAT
GATGATCAACAGTACTATAAAACCATTGGTCAAAATCAGCAAGTTGAaca
aggaaaatattttcacgTTTGAAAGTATTATCAAAGAAGAAGCGAATAAA
GAAGGTAGCGAGGTGATACAAGCTGCTTTGAAAACATTGGTTTACTAGAA
AGTCGACAAGCCCTTCACTGCATGTACCAATATCGAATGCCATCAAAAGC
AACAATTTAAACCAAAAGCTGAACCTAAAGAAATCATAAAGAACATGTAC
AACAAAATTTGCTGTGAGAGCTGTACTGTACCTTTTGTGACCCAAGAAAC
AACAGGAAGTTGGATGTTGTATTTCTGCCGAACCATGAATTGGTCTGGCT
ATTGTAAAGTATGCAAACACAAGTTATCAGAGCACCAGCATGTGGCTTAT
GATCTAGCAGAAGTCGAAAAACGGTTCAAAATGAAGGTTGAAGATTTGCC
AGAAAAGCTGAAGAAGCTTAAAGAAGAATTGAACATCACCATTGATGCTC
TTGTCTATTTCACCAAGTTTCTAGACTGTCGTTGCATGTTCAAAGAAGAT
GATTTGGCTATTAGGTACATAAACGAAGAAGTCAAAGCATCGTGTCAACA
ACGTAATGAGCAAGCAAACACCGTGACAGAATTGCAATCGAAATGGGACG
AACTTTATgccaaatgttttgaaaagcaTAACCAACATATGAAATCGTTG
CTAGATTCTAAGCTGTTAGAAGAAGCGTGCAAAGATCTAAACATGAATGA
CGTCCCAGACTCCCACAAAAGGGGAGAAGCTTTTACTGAAGAAGTTAAGC
GTAAAGCAGACGAAGAAAGTCGAATCGATCCAGAATTTAAAGCTCTCAAA
GATCAACTGTAAGTGGCAGAGAAGAGTCGCAAAGAGAAGGAAATTTTGGC
AGCCGGATTGGAAGATATGCAGGAAAAATTCAATGAGAAAATGTCAGTAA
ATAAAGTCGAGAAAAAGGATCTAACACCCAAAAATGtcgaaatcaaaatc
aaagagCTTTGCCACTTAGATGAAAATGGTGTAACTTTTCAGAAATGTTA
TGCTAATATCAAGAATGCTAAAAATAAAGGTGTGCTGAGACCAAAATCAT
TAGTCAACTCACGNAATGTTATGCTAATATCAAGAATGCTAAAAATAAAG
GCGTGCTGAGACCAAAATCATTAGTCAACTCACGTGACATACCAAAACAA
ACCATGAAAAAAGAGCCAGTTGAAGCTTAGAATGCATGGCAACTTGCAAT
AATAAAGTGACTAACCCTTG
Run BLAST on NCBI

protein sequence of TCONS_00001637-protein

>TCONS_00001637-protein ID=TCONS_00001637-protein|Name=TCONS_00001637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
MMNKRGGRQRKNKQNQTKCQFCDLFVDSIEDHQCPHMAPVGGVNGFGVGG
GAQNGDALIDEGVEIIFTWLEDHKIDGKMNSIDLLIMDDRVQLKRSNDGS
FRSDKKKIPFGTIRRGRLLIGETHFCLKEIVTNQHSNVVPIKIDRDKYIV
FLGRTGVGKSTYINSFVNYQQHGTFQNANDGPLYVPISTRFNHSYQTDDS
DEIEDQIVTLQVPEPSKKTSETKTKSEPENECDEYAQGDVTSSATKLPRA
YEVQPKDVNHKIILIDTPGVQSTTGKLTDEEASKDTDKENSKFIINHLAQ
VPFVSAFVILLKPDEEKLDMSFVATIKSLFSQLDESAKNNVVFAITHANN
CCFRDTKTTVVLKKTFDQIGLEIKITRRNIFHFDNSPFRYLATKKLGYQP
IEDEADMKKCWHKTVENCEAMITYIDALEPHDTSTLVAIDDTKMMINSTI
KPLVKISKLNKENIFTFESIIKEEANKEGSEVIQAALKTLVY
Run BLAST on NCBI

transcript from alignment at sc0000011:74637..84132-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001637 ID=TCONS_00001637|Name=TCONS_00001637|organism=Clytia hemisphaerica|type=transcript|length=9496bp|location=Sequence derived from alignment at sc0000011:74637..84132- (Clytia hemisphaerica)
CAGTACAGTATTACAGTAAATGATGAATAAGAGAGGTGGTCGCCAGCGAA
AAAACAAACAAAATCAGACGAAATGTCAATTTTGTGATTTGTTTGTGGAC
AGTATAGAAGACCACCAATGTCCTCATATGGCACCTGTTGGGGGTGTTAA
TGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGATGCCTTAATTGATG
AAGGTATTTATATAACTATTTATATAAGGTATATTATTCCATTCACCTCT
GGAAAAAAGGTTCATTTTCCGACCTTTCCTCGACAGGGAAGACTAAAGAT
AGGTCTGGTCCTTATGGATACTGGAAACTGACTCCATTTGATTGAAAATG
CATGATAATATTTTATTGAGTGAATTGAAATGAAATATACCCAAGATTTG
GTGAATAAAGAGTCAAAATGGACTTTGCGCAAGCCAATTACATGATTTTT
GTTGGTTTGGCGCAACACGAAATAGGAAAAAATGCAAGGATTTTGGACGT
TTTTGATGATTACATTGGTTATGTGATATAAATTATGGATTGTTTTACAA
ATACAGTTAAAAGGCTGAAAAAACTAGGTTAAAAAATACATTTTGTCATA
AGATATAACGTTTTCTTTACTTTTTCGCCCTTTTCCCGGAAACACGTTTC
CGGGGGTTTACTAACACCTTGACGGATATTTCTCAGGATTGGAAAGTGCT
AGCTTCATGAAATTTTCAGGGAAGGTTTCTTTCACCATTTGCCAGAAAAC
TAATGAAAAATTTTCATGAAAAAATGTTCCACTCCTTCAAACTCAAAAAA
ATTACATATATTAGATTCCGGCCCCCTGGAAAAAAAGTTTCAAAAAATTT
TTTTTTTAGTTTTCTTTGTTTTCTCATTACAAAGCTGTGTGCCAAAAATC
TTTAATTGAAATGATCTAGAACTCTAGAAAAGCCTGTTGAAAGAAAAATA
TAGAACCAATATTACCCCCGTCTTGCTATTTTTAGAATTTCTTTTTCATT
TTTGACATTTTTAATAGTTGTGTTACATTTATGGAAAGTTTCATCAATAT
ATCTTTGATATTTCAAAAGTTATGACTAAAAAAGTAAAAAAATGACTTTT
TCCATTTCTCAGGTAACTACCACCTTAAGCCAGAAATGGATTAGGTAGTC
ATAGGTAATAAAAAGCTTAACTTTGACTTTTTAGGTGTTGAAATCATCTT
CACATGGCTCGAAGATCATAAAATCGATGGAAAAATGAATTCAATTGATT
TACTTATCATGGTAGGCTGCTTACATAACAATTTTTATCTTTTTCAATGA
TTTTGGTGCAAGGCACGACCTCATTAAATTACATACAGGGTTTCCATAAT
ATAGAACAAAAAGAATTTCATTTTGACACACCACCTTTGAATTCAAGGAT
TTATTCTACACCAATTCAATTTCCTCTTTATGTAAACCTTTGATCGGTAA
AACTAAGGCTACACTTATGTTTTTTTCCAGGCGACTGTAAAGCAATTGTT
TTAAAACATTTTGTATTGCAGCGGCCTAGAAAAAAATATTGGTGCAACCC
TAGCTTAACCCAAGAAGTACTTGATGTCAAAAATTTCTAGAGTTGGAATT
CTGTGAAATCATAACTTTAGCAATACCTGACTGGGTATTAGTCTGAAATT
GAATCAAATTTCTTTGGAAAATGTATCGTCCTTTCTAAGCTTAGATCGTC
AATCTTATTGAAACAATTGCATCCATCAAATTTTCACGCACCTTTTCAAA
AGTAGTGGATGTCATATTTCACACCCTTTGTCACAGACTCGCCCCACTGT
GAAATTGGGCAAAAATTTCGTCCCCGGTGGGAAAATACCTTGGATTTTCA
GCCCCACTGGGAATTTGATTTTTATTTCGTCCCCATTTGTCGAAATCCAA
TGTAAAAAAATTTTACTCCAAAACCACCCCACTGGATTTTTTAACTTTGG
AACAATAAAATTTCTTAATAAAATTTTTTATCCCCACTGAGGAAAAAGTT
CCACCGGGGATGTGAGACAGGGGTGCTATTTCATCTTACCAGGGAGTGGT
AAGTGTAAGCATAGTATAAGAAAGTCGCGGCTTTCTTATACTATGGTGTA
AGTCTTCTTCTAAAGCTGACGTCATATTTTAAAATAAGTCCTCCAAATTT
AATTATTTTTTTATTTGGATTTCAGGATGACAGAGTTCAACTCAAGCGAA
GCAACGACGGATCCTTCAGATCAGACAAGAAGAAAATTCCTTTTGGCACA
ATACGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTAAAAGA
AATTGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGACCGAG
GTGAGCCATTCCTCATTGAAAGTAAACCCCTGCCTCACAGCCCAAGTGGA
AATTTTTACCACGCAGTGAGGAATAAAATATCTATCGATAGTGAAATTCT
ATTGCGTAAAGCTCAAAAAATCCAGTAAGGATGATTAATTGTCCAAGTTT
TTTCAACGAATTTCGAATGGGATGAAATCAAAGTCAATTTGTCAGTTAGG
CATAGATTGTAGGATATTTTTCCCACCAGAAACGACATATTTTGGCCAAA
TTTTCCAGTGGATCGGGGGTCCCATCGGGTTTAGGACAGAGTTTTAAAAG
TAGATAAACCCATGTTTATCATAAATTTTCCCTCAATTGACAGACAAGAT
TGTATCAAAGAGTAAAATAATTAATTTTTACCTGAATTATGACACTTGGA
ATTCCATTAAACTGAACCAATTGCGTCAATTCAGCCAAGGCATCTTGTTT
TCTTAAAGGACGTGGACATTTCTGAAGAAAGAGAAAGATGTAGGTTGTAT
GTAAAATGTGTTTACAAACTTTTTCTCCATTTTAAGATAAGTACATCGTT
TTCCTTGGAAGAACTGGAGTTGGTAAATCAACGTATATCAATTCTTTCGT
CAATTATCAACAACACGGAACCTTCCAGAATGCGAATGATGGTCCTTTAT
ACGTTCCAATATCCACAAGATTCAACCATTCATACCAAACAGATGATAGT
GATGAAATTGAAGATCAGATAGTGACTTTGCAAGTTCCAGAACCATCCAA
AAAGACATCTGAAACAAAAACAAAATCTGAACCTGAAAACGAATGCGATG
AATATGCACAAGGTGACGTGACGTCATCAGCTACAAAATTGCCAAGAGCT
TATGAAGTCCAACCGAAAGATGTGAACCATAAGATTATCTTGATTGATAC
TCCAGGTGTTCAATCGACCACTGGCAAGCTGACTGATGAGGAAGCTTCAA
AAGATACAGATAAAGAGAATAGCAAATTTATCATCAATCATTTAGCACAA
GTTCCCTTTGTTAGTGCTTTCGTTATCCTCTTAAAGCCAGACGAGGAAAA
GTTGGACATGTCTTTTGTGGCGACCATCAAATCATTATTCAGTCAACTTG
ATGAGTCAGCAAAGAATAATGTTGTTTTTGCGATCACGCATGCCAACAAC
TGCTGTTTCCGTGATACCAAAACGACAGTGGTGCTGAAAAAGACTTTTGA
TCAGATTGGCTTGGAGATCAAAATCACCAGACGCAATATATTCCATTTCG
ATAATTCACCATTCCGTTACCTAGCAACCAAGAAGCTTGGTTACCAACCA
ATCGAAGACGAGGCTGATATGAAAAAATGCTGGCATAAAACAGTTGAGAA
TTGTGAAGCAATGATTACATATATTGATGCATTGGAACCACACGATACCA
GCACCTTGGTTGCTATTGACGACACAAAAATGATGATCAACAGTACTATA
AAACCATTGGTCAAAATCAGCAAGTTGAACAAGGAAAATATTTTCACGTT
TGAAAGTATTATCAAAGAAGAAGCGAATAAAGAAGGTAGCGAGGTGATAC
AAGCTGCTTTGAAAACATTGGTTTACTAGAAAGTCGACAAGCCCTTCACT
GCATGTACCAATATCGAATGCCATCAAAAGCAACAATTTAAACCAAAAGC
TGAACCTAAAGAAATCATAAAGAACATGTACAACAAAATTTGCTGTGAGA
GCTGTACTGTACCTTTTGTGACCCAAGAAACAACAGGAAGTTGGATGTTG
TATTTCTGCCGAACCATGAATTGGTCTGGCTATTGTAAAGTATGCAAACA
CAAGTTATCAGAGCACCAGCATGTGGCTTATGATCTAGCAGAAGTCGAAA
AACGGTTCAAAATGAAGGTTGAAGATTTGCCAGAAAAGCTGAAGAAGCTT
AAAGAAGAATTGAACATCACCATTGATGCTCTTGTCTATTTCACCAAGTT
TCTAGACTGTCGTTGCATGTTCAAAGAAGATGATTTGGCTATTAGGTAAT
TTTATCAATATATCACCAAACAAAGATACTAAAACTATTTCTCTATGAGC
CCGGGGCTAAAAGTAGTCGCTGGACAAGTCTCTCTATGGGTTATAAAAAC
AACAAAAAGTAAAAACAGTCTCTCCAAGGTTCACTATTTTCCCATTGTTG
GCTTGAATTAAGGGTACTAAAACCGTGATAAATCAGATCCCTGGTCGGTT
TTCGGAGGTCCAGTTCACACATAACCGACATTCCCCAACGCTTAACCCTA
ATACATTACCGGCTTACGAGAGCTTTCCCAGTCTAGATACATTTGATTTT
GATTCTTAGGTACATAAACGAAGAAGTCAAAGCATCGTGTCAACAACGTA
ATGAGCAAGCAAACACCGTGACAGAATTGCAATCGAAATGGGACGAACTT
TATGCCAAATGTTTTGAAAAGCATAACCAACATATGAAATCGTTGCTAGA
TTCTAAGCTGTTAGAAGAAGCGTGCAAAGATCTAAACATGAATGACGTCC
CAGACTCCCACAAAAGGGGAGAAGGTAGTGATTATCTTTTCAACGGTGTT
TTAATCACAAAATTTGATGTATATATCAACATGAAAAAAATCTAAGTGAT
TGTGAAATATTCCCTCATAAAACCTGGAGAATTCAAGGAGACATTTCTAG
AGAACAACTGGGGTCCCTTAAGAAGAGGGTAGAAATCCTGTAGGTCTGTC
CTGCAAAAATAGCTTCCTCAACATGGGTGGGATGAAATCCAGTTATAAAG
TACCGTATTAATTCAAACAAGAAGCCCAAGGGCATGAAGGCCCAGCATTA
AAAGTTTTGTTTCTAAATAAGAGTGATAAAGTTTGCTTAAAATCATCAAT
TTTAATTTACAAGCTTTTTTATATTGAATTGGCACGAATGTGGAGCAGGA
TTGGTCAGAAAGAGGAAAACATTTTTTTGCTTATATTAGCACAATATAAC
AAACTGATATGAAACATGTGTCTAACATGAAACGGGAACACTTATTTATG
TAAAAATAAAACTTTTGAAAAATCTTTAACAAACATGATAACGCTCTAAC
TAAAGGAAGCAAAAACAAATGATAAAAAGTAAAATTAAAAAGAAACTAGC
CTCGAAAATTTTTTCCTGCAACCACAGCGGCTGCAACCACAGCGGNNCAA
GATGGTGTCTGACAGGGTGGCGCCGATAAGCCCTTTTGACCGTTTTGGAC
TGAAATGGCTTAATTTTCTTAGATAAATGTATCTATAATGTCCTTATTGT
TTATTTTTTTAACCATTATGATATGCTGAAATTGTGTACAAAATTTGAGC
TTTTTAGTTCAATTTTACCAGGAGAAACAGGCAAAAGAAACTTGCAAAAT
CAAACAAAACCGCAATACAAGCTGCAACATGGAGAATGCTCAATATGCCT
TGCGACAACTTTTTCAAAACAGTAGATTTGAGCCCGGCTCGAACCACTAA
AGTTATTTGTCAGTGATTCTGAGCCCGGCATGTGCTACCAAGCCGCTGCA
AAAATTTGAAATTACAAACTCCTACCCCTTCCGTGAGATTGGGTAACTTG
CATCAGTGAAGGCTAACATGCATAGCCCTCAAATGACTGACCAATCAAAG
CAGCAAAATTTCAAAACAAATGAACTACGCAGCTTCGCTCGCAGCTCTAC
TCTACCATTTTTGTTTTGATTTCACTTTGCTATGCATGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATCTAGCAATTCCTTTGTTTTTGAGTGATATACTTTTCAAAATT
AAGCGGTAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAAGCGGG
TCGCCCAAGGCCGTGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTAC
CAAAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATATGGTATAC
AGTACAAAAAATTTACTGTGGGAAATTTGAATTTATCGCTGTCCTCACTT
ACGAAAATAAAAACCATATTTCTGAACTTGCGTTTTCTCTTAAAGAGTGT
GACCGTTGAAAGAATTTGTTTGGTTTTCAACTGTTGAACGANTATTGTTT
ATTTTTTTAATCATTATGATATGCTGAAATTGTGTACAAAATTTGAGCTT
TTTAGTTCAATTTTACCAGGAGAAACAGGCAAAAAAAACTTGCAAAATCA
GACAAATCCGCAATACAAGCTGCAACATGGAAAATGCTCAAAATGCCTTG
CGACAACTTTTTCAAAACCAGTAGATTTGAACCCGGCTCAAACCACCAAA
GTTATTTGTCAGTGATTCTGAGCCCGGCATGTGCTACCAAGCCGCTGCAA
AAATTTGAAATTACAAACTCCTACCCCTACCGTGAGATCGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATTTCGTTCGATTACGAT
TATGTACGATGAGTTTGATTGCGATTAAATTAAATTGGATCACTCTGTTA
GAGCTTCTTAGCGTGGGCGGCCGAGCGCTTAAGTACCCGAAAAAAATCTA
ATATAATTGAATCATTTCAATCTAACGTAATTGAATACAATCGAACGTAA
TCAAAGCAATCGAACAGCAAATCCTGGGTAGTATTCGATTGCGATTCGAT
TGCGTTTGATTGTATTCAATTACGTTCGACAATCGAATTGCAATTATTCG
ATTGCGTTCAATTCGTTCGATTGACACCGTCTGGTGCGTGATGTAAACTA
AAAAAACTGAGCATGATCAAGACTCCTTTAAAAAAGCTCAACAAATATAA
AATTTCACCATAATTTTATGCAGAAAAAGTATCAAAATATCCAACAAGAA
CAATACAAATAGAGGCTATTCTAGTCAACCTCTTGCTGTTTGAATAAATT
TTTTTGTCGAATATAAAAGCCTGAACACACATTTCGCACACGTTAAGTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTGAGAGAGGA
CAGAAAAACAGAACACGGCACGGACTGCGGACAGACAGGACAGGACAGAC
AGACACACGGAAAGTTCCTCTTGAAAGGCCCCTTCGCTAGGCGCTGGGCC
AATAAACGCCCCCTTCTTATAAACGCCCCTCATCGAATAAACGCCCCTCC
TAAAGGAAAAATTTTCAATACACGCCCTCTAGGAAGGCAGGCCGTTTATT
TGAAACAAGTAGCTGTTAGGGAGAATCATATGGAGGAAAATTTAAAATAT
GTGTTGATAATTGTATTTTTGAATCATTCAAACTAGTTTGACTCATTTTA
AACATATCTAAAATGAAATTTTTCAACTGAAGAAAAACGAGAAGGCAAAA
CAAGGTTCCAATTTACTTTATTAAAGTGACCTTGGTTGAATATTATTTTT
TATTCGAACTAATACGGTAGGCCAATCAACATTATAGAAATCCACTTATC
TTTAGCTTTTACTGAAGAAGTTAAGCGTAAAGCAGACGAAGAAAGTCGAA
TCGATCCAGAATTTAAAGCTCTCAAAGATCAACTGTAAGTGGCAGAGAAG
AGTCGCAAAGAGAAGGAAATTTTGGCAGCCGGATTGGAAGATATGCAGGA
AAAATTCAATGAGAAAATGTCAGTAAATAAAGTCGAGAAAAAGGATCTAA
CACCCAAAAATGTCGAAATCAAAATCAAAGAGCTTTGCCACTTAGATGAA
AATGGTGTAACTTTTCAGAAATGTTATGCTAATATCAAGAATGCTAAAAA
TAAAGGTGTGCTGAGACCAAAATCATTAGTCAACTCACGNAATGTTATGC
TAATATCAAGAATGCTAAAAATAAAGGCGTGCTGAGACCAAAATCATTAG
TCAACTCACGTGACATACCAAAACAAACCATGAAAAAAGAGCCAGTTGAA
GCTTAGAATGCATGGCAACTTGCAATAATAAAGTGACTAACCCTTG

Coding sequence (CDS) from alignment at sc0000011:74637..84132-

>TCONS_00001637 ID=TCONS_00001637|Name=TCONS_00001637|organism=Clytia hemisphaerica|type=CDS|length=5916bp|location=Sequence derived from alignment at sc0000011:74637..84132- (Clytia hemisphaerica)
ATAAGTACATCGTTTTCCTTGGAAGAACTGGAGTTGGTAAATCAACGTAT
ATCAATTCTTTCGTCAATTATCAACAACACGGAACCTTCCAGAATGCGAA
TGATGGTCCTTTATACGTTCCAATATCCACAAGATTCAACCATTCATACC
AAACAGATGATAGTGATGAAATTGAAGATCAGATAGTGACTTTGCAAGTT
CCAGAACCATCCAAAAAGACATCTGAAACAAAAACAAAATCTGAACCTGA
AAACGAATGCGATGAATATGCACAAGGTGACGTGACGTCATCAGCTACAA
AATTGCCAAGAGCTTATGAAGTCCAACCGAAAGATGTGAACCATAAGATT
ATCTTGATTGATACTCCAGGTGTTCAATCGACCACTGGCAAGCTGACTGA
TGAGGAAGCTTCAAAAGATACAGATAAAGAGAATAGCAAATTTATCATCA
ATCATTTAGCACAAGTTCCCTTTGTTAGTGCTTTCGTTATCCTCTTAAAG
CCAGACGAGGAAAAGTTGGACATGTCTTTTGTGGCGACCATCAAATCATT
ATTCAGTCAACTTGATGAGTCAGCAAAGAATAATGTTGTTTTTGCGATCA
CGCATGCCAACAACTGCTGTTTCCGTGATACCAAAACGACAGTGGTGCTG
AAAAAGACTTTTGATCAGATTGGCTTGGAGATCAAAATCACCAGACGCAA
TATATTCCATTTCGATAATTCACCATTCCGTTACCTAGCAACCAAGAAGC
TTGGTTACCAACCAATCGAAGACGAGGCTGATATGAAAAAATGCTGGCAT
AAAACAGTTGAGAATTGTGAAGCAATGATTACATATATTGATGCATTGGA
ACCACACGATACCAGCACCTTGGTTGCTATTGACGACACAAAAATGATGA
TCAACAGTACTATAAAACCATTGGTCAAAATCAGCAAGTTGAACAAGGAA
AATATTTTCACGTTTGAAAGTATTATCAAAGAAGAAGCGAATAAAGAAGG
TAGCGAGGTGATACAAGCTGCTTTGAAAACATTGGTTTACTAGGATGACA
GAGTTCAACTCAAGCGAAGCAACGACGGATCCTTCAGATCAGACAAGAAG
AAAATTCCTTTTGGCACAATACGCAGAGGCAGACTTTTGATTGGAGAGAC
ACATTTCTGCTTAAAAGAAATTGTGACCAATCAACATTCGAATGTAGTCC
CTATAAAAATCGACCGAGGTGTTGAAATCATCTTCACATGGCTCGAAGAT
CATAAAATCGATGGAAAAATGAATTCAATTGATTTACTTATCATGATGAT
GAATAAGAGAGGTGGTCGCCAGCGAAAAAACAAACAAAATCAGACGAAAT
GTCAATTTTGTGATTTGTTTGTGGACAGTATAGAAGACCACCAATGTCCT
CATATGGCACCTGTTGGGGGTGTTAATGGTTTTGGTGTGGGTGGAGGTGC
TCAAAATGGCGATGCCTTAATTGATGAAGATAAGTACATCGTTTTCCTTG
GAAGAACTGGAGTTGGTAAATCAACGTATATCAATTCTTTCGTCAATTAT
CAACAACACGGAACCTTCCAGAATGCGAATGATGGTCCTTTATACGTTCC
AATATCCACAAGATTCAACCATTCATACCAAACAGATGATAGTGATGAAA
TTGAAGATCAGATAGTGACTTTGCAAGTTCCAGAACCATCCAAAAAGACA
TCTGAAACAAAAACAAAATCTGAACCTGAAAACGAATGCGATGAATATGC
ACAAGGTGACGTGACGTCATCAGCTACAAAATTGCCAAGAGCTTATGAAG
TCCAACCGAAAGATGTGAACCATAAGATTATCTTGATTGATACTCCAGGT
GTTCAATCGACCACTGGCAAGCTGACTGATGAGGAAGCTTCAAAAGATAC
AGATAAAGAGAATAGCAAATTTATCATCAATCATTTAGCACAAGTTCCCT
TTGTTAGTGCTTTCGTTATCCTCTTAAAGCCAGACGAGGAAAAGTTGGAC
ATGTCTTTTGTGGCGACCATCAAATCATTATTCAGTCAACTTGATGAGTC
AGCAAAGAATAATGTTGTTTTTGCGATCACGCATGCCAACAACTGCTGTT
TCCGTGATACCAAAACGACAGTGGTGCTGAAAAAGACTTTTGATCAGATT
GGCTTGGAGATCAAAATCACCAGACGCAATATATTCCATTTCGATAATTC
ACCATTCCGTTACCTAGCAACCAAGAAGCTTGGTTACCAACCAATCGAAG
ACGAGGCTGATATGAAAAAATGCTGGCATAAAACAGTTGAGAATTGTGAA
GCAATGATTACATATATTGATGCATTGGAACCACACGATACCAGCACCTT
GGTTGCTATTGACGACACAAAAATGATGATCAACAGTACTATAAAACCAT
TGGTCAAAATCAGCAAGTTGAACAAGGAAAATATTTTCACGTTTGAAAGT
ATTATCAAAGAAGAAGCGAATAAAGAAGGTAGCGAGGTGATACAAGCTGC
TTTGAAAACATTGGTTTACTAGGATGACAGAGTTCAACTCAAGCGAAGCA
ACGACGGATCCTTCAGATCAGACAAGAAGAAAATTCCTTTTGGCACAATA
CGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTAAAAGAAAT
TGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGACCGAGGTG
TTGAAATCATCTTCACATGGCTCGAAGATCATAAAATCGATGGAAAAATG
AATTCAATTGATTTACTTATCATGATGATGAATAAGAGAGGTGGTCGCCA
GCGAAAAAACAAACAAAATCAGACGAAATGTCAATTTTGTGATTTGTTTG
TGGACAGTATAGAAGACCACCAATGTCCTCATATGGCACCTGTTGGGGGT
GTTAATGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGATGCCTTAAT
TGATGAAGATAAGTACATCGTTTTCCTTGGAAGAACTGGAGTTGGTAAAT
CAACGTATATCAATTCTTTCGTCAATTATCAACAACACGGAACCTTCCAG
AATGCGAATGATGGTCCTTTATACGTTCCAATATCCACAAGATTCAACCA
TTCATACCAAACAGATGATAGTGATGAAATTGAAGATCAGATAGTGACTT
TGCAAGTTCCAGAACCATCCAAAAAGACATCTGAAACAAAAACAAAATCT
GAACCTGAAAACGAATGCGATGAATATGCACAAGGTGACGTGACGTCATC
AGCTACAAAATTGCCAAGAGCTTATGAAGTCCAACCGAAAGATGTGAACC
ATAAGATTATCTTGATTGATACTCCAGGTGTTCAATCGACCACTGGCAAG
CTGACTGATGAGGAAGCTTCAAAAGATACAGATAAAGAGAATAGCAAATT
TATCATCAATCATTTAGCACAAGTTCCCTTTGTTAGTGCTTTCGTTATCC
TCTTAAAGCCAGACGAGGAAAAGTTGGACATGTCTTTTGTGGCGACCATC
AAATCATTATTCAGTCAACTTGATGAGTCAGCAAAGAATAATGTTGTTTT
TGCGATCACGCATGCCAACAACTGCTGTTTCCGTGATACCAAAACGACAG
TGGTGCTGAAAAAGACTTTTGATCAGATTGGCTTGGAGATCAAAATCACC
AGACGCAATATATTCCATTTCGATAATTCACCATTCCGTTACCTAGCAAC
CAAGAAGCTTGGTTACCAACCAATCGAAGACGAGGCTGATATGAAAAAAT
GCTGGCATAAAACAGTTGAGAATTGTGAAGCAATGATTACATATATTGAT
GCATTGGAACCACACGATACCAGCACCTTGGTTGCTATTGACGACACAAA
AATGATGATCAACAGTACTATAAAACCATTGGTCAAAATCAGCAAGTTGA
ACAAGGAAAATATTTTCACGTTTGAAAGTATTATCAAAGAAGAAGCGAAT
AAAGAAGGTAGCGAGGTGATACAAGCTGCTTTGAAAACATTGGTTTACTA
GGATGACAGAGTTCAACTCAAGCGAAGCAACGACGGATCCTTCAGATCAG
ACAAGAAGAAAATTCCTTTTGGCACAATACGCAGAGGCAGACTTTTGATT
GGAGAGACACATTTCTGCTTAAAAGAAATTGTGACCAATCAACATTCGAA
TGTAGTCCCTATAAAAATCGACCGAGGTGTTGAAATCATCTTCACATGGC
TCGAAGATCATAAAATCGATGGAAAAATGAATTCAATTGATTTACTTATC
ATGATGATGAATAAGAGAGGTGGTCGCCAGCGAAAAAACAAACAAAATCA
GACGAAATGTCAATTTTGTGATTTGTTTGTGGACAGTATAGAAGACCACC
AATGTCCTCATATGGCACCTGTTGGGGGTGTTAATGGTTTTGGTGTGGGT
GGAGGTGCTCAAAATGGCGATGCCTTAATTGATGAAGATAAGTACATCGT
TTTCCTTGGAAGAACTGGAGTTGGTAAATCAACGTATATCAATTCTTTCG
TCAATTATCAACAACACGGAACCTTCCAGAATGCGAATGATGGTCCTTTA
TACGTTCCAATATCCACAAGATTCAACCATTCATACCAAACAGATGATAG
TGATGAAATTGAAGATCAGATAGTGACTTTGCAAGTTCCAGAACCATCCA
AAAAGACATCTGAAACAAAAACAAAATCTGAACCTGAAAACGAATGCGAT
GAATATGCACAAGGTGACGTGACGTCATCAGCTACAAAATTGCCAAGAGC
TTATGAAGTCCAACCGAAAGATGTGAACCATAAGATTATCTTGATTGATA
CTCCAGGTGTTCAATCGACCACTGGCAAGCTGACTGATGAGGAAGCTTCA
AAAGATACAGATAAAGAGAATAGCAAATTTATCATCAATCATTTAGCACA
AGTTCCCTTTGTTAGTGCTTTCGTTATCCTCTTAAAGCCAGACGAGGAAA
AGTTGGACATGTCTTTTGTGGCGACCATCAAATCATTATTCAGTCAACTT
GATGAGTCAGCAAAGAATAATGTTGTTTTTGCGATCACGCATGCCAACAA
CTGCTGTTTCCGTGATACCAAAACGACAGTGGTGCTGAAAAAGACTTTTG
ATCAGATTGGCTTGGAGATCAAAATCACCAGACGCAATATATTCCATTTC
GATAATTCACCATTCCGTTACCTAGCAACCAAGAAGCTTGGTTACCAACC
AATCGAAGACGAGGCTGATATGAAAAAATGCTGGCATAAAACAGTTGAGA
ATTGTGAAGCAATGATTACATATATTGATGCATTGGAACCACACGATACC
AGCACCTTGGTTGCTATTGACGACACAAAAATGATGATCAACAGTACTAT
AAAACCATTGGTCAAAATCAGCAAGTTGAACAAGGAAAATATTTTCACGT
TTGAAAGTATTATCAAAGAAGAAGCGAATAAAGAAGGTAGCGAGGTGATA
CAAGCTGCTTTGAAAACATTGGTTTACTAGGATGACAGAGTTCAACTCAA
GCGAAGCAACGACGGATCCTTCAGATCAGACAAGAAGAAAATTCCTTTTG
GCACAATACGCAGAGGCAGACTTTTGATTGGAGAGACACATTTCTGCTTA
AAAGAAATTGTGACCAATCAACATTCGAATGTAGTCCCTATAAAAATCGA
CCGAGGTGTTGAAATCATCTTCACATGGCTCGAAGATCATAAAATCGATG
GAAAAATGAATTCAATTGATTTACTTATCATGATGATGAATAAGAGAGGT
GGTCGCCAGCGAAAAAACAAACAAAATCAGACGAAATGTCAATTTTGTGA
TTTGTTTGTGGACAGTATAGAAGACCACCAATGTCCTCATATGGCACCTG
TTGGGGGTGTTAATGGTTTTGGTGTGGGTGGAGGTGCTCAAAATGGCGAT
GCCTTAATTGATGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000851XLOC_000851Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001637-exon-sc0000011-1575043694:83930..84132TCONS_00001637-exon-sc0000011-1575043694:83930..84132Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:82872..82948TCONS_00001637-exon-sc0000011-1575043694:82872..82948Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:81783..81957TCONS_00001637-exon-sc0000011-1575043694:81783..81957Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:79788..81246TCONS_00001637-exon-sc0000011-1575043694:79788..81246Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:79259..79473TCONS_00001637-exon-sc0000011-1575043694:79259..79473Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1575043694:74637..75127TCONS_00001637-exon-sc0000011-1575043694:74637..75127Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:83930..84132TCONS_00001637-exon-sc0000011-1510915933:83930..84132Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:82872..82948TCONS_00001637-exon-sc0000011-1510915933:82872..82948Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:81783..81957TCONS_00001637-exon-sc0000011-1510915933:81783..81957Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:79788..81246TCONS_00001637-exon-sc0000011-1510915933:79788..81246Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:79259..79473TCONS_00001637-exon-sc0000011-1510915933:79259..79473Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1510915933:74637..75127TCONS_00001637-exon-sc0000011-1510915933:74637..75127Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:83930..84132TCONS_00001637-exon-sc0000011-1491911889:83930..84132Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:82872..82948TCONS_00001637-exon-sc0000011-1491911889:82872..82948Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:81783..81957TCONS_00001637-exon-sc0000011-1491911889:81783..81957Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:79788..81246TCONS_00001637-exon-sc0000011-1491911889:79788..81246Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:79259..79473TCONS_00001637-exon-sc0000011-1491911889:79259..79473Clytia hemisphaericaexon
TCONS_00001637-exon-sc0000011-1491911889:74637..75127TCONS_00001637-exon-sc0000011-1491911889:74637..75127Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001637-proteinTCONS_00001637-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:74637..84132 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.357191	0.266576	0.643225	0.273728	0.682	2.13643	0.805043	0.842752	4.29924	5.45469	16.013	23.1436	2.39014	2.79979	7.25262	13.4079	0.312999	0	0.521514	0	1.22086	1.30751	1.24736	1.99682	0.163324	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001637 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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