TCONS_00001628 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001628
Unique NameTCONS_00001628
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2293

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001628 ID=TCONS_00001628|Name=TCONS_00001628|organism=Clytia hemisphaerica|type=transcript|length=2293bp
ATACTAATCACGTGCTGTTTAGATCTTtgcataattatttcaaaagcTTG
CCTTTTCAATCTTCAGCCCGCCGTAAATACTCACCAAGCTGGCCTATCAT
TCTTAGAACCAGTTTTGTGACTAAAGTCCAGTTATAAGCTGGTTTTTAGT
CTGTTAGCTAACTTGCCGAAACGTCGACATTTCGTCTCGCGAGATCGAAA
TCAAAATATACCTTGTGGAATTTTATTGAGGTACTCTGAGCTTGTAGTTA
AATTTGTGGAGAAATCTTGGGTTTTAGGTAGCGATTTCTTTTACTGGCAA
ATTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAA
AAGAGATTACTGAACTCAACCTTGATAATACCAGATCCACTTCAATTGTT
GGATTGACAGATGAATACTcaaatttggaatatctttcaTTGATCAATGT
TGGGTTAACAACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaaaac
tTGAGCTGAGTGACAATAGGATATCAACAGGATTGGATTATTTACTAAAA
TTACCTGGTTTAGCTTACCTCAGTCTCAGTGGAAACAGaatcaaagactt
tgaaagcCTTTCTCCATTGGCTAAACTTAGTAACTTGAAGAGTTTGGATT
TGTTTAACTGCGAAGTCACTTGTGAAAAGGATTATCGGGCCAAAGTATTT
GAGCTCATCCCGCAGCTGAAATTTCTTGATGGGGCTGACAGAGACGACAA
AGAAATGGAAGAGTCTGAGTCagAAGGAGAAGAGGACGAAGAAGATGATG
ACGATGAAGAAGGCGAAGATGAAGACGGTGTAGAGAATGGTGTAACAGAA
GATGACGATGACGAGGATGAAGATACTGAAATTGTAGGTATCGATGATGA
GGATGATGATGAATTGGAAGAAGAGGAACTAGATGAAGATGCTGATGGTG
GATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAATGAAGAGGATGAT
GAGGACGATGATGATGACGAAGAAGAAGTTGTCATCACTGCTGAAAATGA
TGGATTGATTGACAGagaagaagaagaggaagacgatgatgatgatgacg
acGACGATGAATTAGAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGAT
TACCTCACTAAAGAAAACCTCTCTGAGGAAGACGAAGACGAGGAAGATTT
CAACCCTGAAGAAGTCgacgatgaagaagaagaactctctgaagaagaag
aagagattATGGAAGAACAGAGAGGTGTCAAACGAAAACATGAAGGCGAC
CATTCACGTGCAGATGAGGAGTCATAACATTGTCAATACATCATCAACAC
ACAACAATTTAACTGCCGTGGGAAGAATCTTTTCATTGTTAACACCCTGG
AGGTGTGGTATGGTTTATTGATGGCGAAAAGTGAGAAAGAATTAAACGGG
TGAAGGATGATCTGCCGGTCAGACGCATTCTTTTGAAGTAGGCTGAAACA
CACGGCAATATTTTATTATAGATAGAACTCCTGTGTTTTCTGGAATCCGA
GAGTGATTCTTGGACACGCTACTTGACAGAGACTTGCTTGATAAAAAGAC
CCTCAATGACTTACGATGTTTTATTTTCCTCGTTTACAATGATGCCCAAT
TATTCCTGGAATTTAATAAATATCACAGTTTTATTCACCAAACATCACCA
TTACAGCATTTGCTAATCTTAaggttttttatttatattttatttatgac
tgggttttttttttcacgtgCTCTTTAAAACCGTTttccctttgttttga
aatatgacTATCTGATAGGTCAGGGTTGACTAAGCTAGCACCTAGAAAAG
AATGATATTGATTATACAAAGTCTCCCCTAGTTAAATACGGGGCTTGAAA
CTAAATTCACATTGGGACCGCAAGAAAAAAGATTCGGATCATATCGATAT
TTGCCATTTAAAGATCTAATagaaaatgatgaaatcaaaCCTGATGAGCC
AAACACCTGTAACACAATAGGAAATTTTCAGAGGCCAGAAAGTAATGAAG
TAAAAATGATTAATCCtaagtattttttatcaatagtATATTATTACGTT
TAAAAGTAAGGAATGGAAAGGCAAGTGGTAAAAGAAATTTATCTTGTTTG
TTATttgaaaacataaaatatttttacgttGAACTGTTCGAATAGACCAA
AAAAAGTTCTATCCCTGTATATATTGTATAATGTTTGTATAATTTGTTAT
GGCtaatttttaggcaaaaagaaaAGTTATACGAACAGTAAAT
Run BLAST on NCBI

transcript from alignment at sc0000011:1055406..1062634+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001628 ID=TCONS_00001628|Name=TCONS_00001628|organism=Clytia hemisphaerica|type=transcript|length=7229bp|location=Sequence derived from alignment at sc0000011:1055406..1062634+ (Clytia hemisphaerica)
ATACTAATCACGTGCTGTTTAGATCTTtgcataattatttcaaaagcTTG CCTTTTCAATCTTCAGCCCGCCGTAAATACTCACCAAGCTGGCCTATCAT TCTTAGAACCAGTTTTGTGACTAAAGTCCAGTTATAAGCTGGTTTTTAGT CTGTTAGCTAACTTGCCGAAACGTCGACATTTCGTCTCGCGAGATCGAAA TCAAAATATACCTTGTGGAATTTTATTGAGGTACTCTGAGCTTGTAGTTA AATTTGTGGAGAAATCTTGGGTTTTAGGTAGCGATTTCTTTTACTGGCAA ATTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAA AAGAGGTATGTTCTTCTATCTTTCTTGACACAGTTCCTATCAATTGTACT TTTTGATATAAAGATAAActttaaatatgatttttagcAGGTTGTTGtat tatttgtttatgtttacaGATTACTGAACTCAACCTTGATAATACCAGAT CCACTTCAATTGTTGGATTGACAGATGAATACTcaaatttggaatatctt tcaTTGATCAATGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACttga gaaattaaaaaaagtaagCACTGTCTGTGTAATTTTTCgtaaattaattt tgaataatCAGTTGTCAATTTTATGTATTANGTAATTTTCGTAATTAATT TTGAATAGTCAGTTGTCATTTTTATGTATTACTTTcagatactttaatgg gataaaatttcagGGACTCTGTGTGGATTTAGGTATCATCCTGACCTaac tttgttgtcatttctCTAGTCCTTCTAGACgagtgagaaaaaaaatgttt tcacattacacatccctttagagttTTAGCGTTGCatgcagaaaacaatc acaatctgatctcaggttttAGCTTGACCACACAATGTTTATTCCCTTCA AAATTTTAGTCCATTAAAGTTTAACCTTCTATCTTTGTGATATATTTTTT GCTGAACACAGGAGGCAAAAAGAGCTAGAAAGGCAGGACAGTGTCTGCTG CTCTAGATAGGCTGAAAAGAGCACTTTTTCTGTTGCTTTTTCATGTCTGA TCACATAAGgctaaaaatgccttaaaatggtCTGAAATGACtaaatgtat ttttgttttACCCAAGTTCTAATGGATTTCTTTTACTTTTGTTGGAGTTC AATTCGGGAGTAGGGTTTTCAATATACAATAACTGGGCATATCACCAAAC TAAATTTTAGctgggacaaaaatcagttctTAGAGGGATATTTGTATCCT TACTAGGTTTGGTTTTGTTTGCAAAACTGCCCAATAATGTGAATGTTAAG AAGGGACACATACTTCTTTCCCCACACAAACCACCTACTGTGAGaccggg taacttgcatcagtggaggctaacatgcttagccctcaaatgaatggcct ggctggtcattaatatacaaagttaaatcaaaacaaaaatggtagaacag agctgcgtagttcatttttttgaaattttgctgttttaattggtcagtca tttCAGGGTTCGAATTAACGTATCGCGTTTCGCCATTCGCGATGCGTTTT TGGAAATgtaggaagcaaaaattcagaaatttaaCAAAATCGCGATACAA CATATGAAGAATTTTACAGCTCACTAAAGTACAATGGTTAAATTGGTCTT TAGAGTGGAGAATGCATCGTATATTGATAAAAACGCATAATTAGCTCACT CCGTTCGCACAAAAGTGCGATGCACTTTTAAATAGTTAATTCGATCCATG CATTTAATAGCTATACAAGTTTCCCTCtgctgatgcaagttacccaactt cacggtacCATAAATGTCACATCTTGCAAAATAAAcgttttatagcaaaa tttgaGACACTATTCATGCTTTGATATAAATTTCAGTTGCTAGATATAAC ATAGAGAAACAAGGAAAAGTTTAACTTTCTTTGCAAGCACTATTACTGAG TTACATCAGCTctagacaggagaaccgtccTGTATTCTTGTAAaggaata acaaaatttgattggccaTGTTTTCAACTgtcattaggatctgggaaata ataataataaataataccGGGtaacccacgaaaaagttcagacgcttccc gacgtcttgaggccgaaaaaatgtcccaaagtgcttggagttttgatatt tagaaagtagatatcctaacttaaaatttgggccatcactttttaaattt gactaacttgttctctacttatgagcatttaaagtcaaaattcacttttc gaaaagtgtaaaaaacacgtaaaaaagaggtattaaattcacgcaatcaa ttagaaaatcacttacaattgacttatttaacgagttttatgacattaat aataataaaaacacctttgaaagtagtttttgtttaaaacaagactagtt tttaaaaaaaattggcgctttcatagatttttttcaaaaactgtatataa aaaacgtctaaaaatatcaaatttaataccccttttttacgtatttttta cactttccgtaaagtgaattttgactttaaaagagaacaagttggtcaaa tttaaaaagtgatagctcaaattttaatttaggatatctactttctaaat atcaaaactccaagcactttgggacatttgttcggcctcaagacgtcggg aaacgtctgaactttttcgtgggtcacccggtagaataagaaatcatagc atggatctccaggctaacaTCAGCTCTTGAAGTGATTCAtcatttttctc tgattttaaatttaatgttttgttgATCTAAAAACCAGGTGtataggtcc ataaaagtatcattttttgtcttttttagctTGAGCTGAGTGACAATAGG ATATCAACAGGATTGGATTATTTACTAAAATTACCTGGTTTAGCTTACCT CAGTCTCAGTGGAAACAGaatcaaagactttgaaagcCTTTCTCCATTGG TAAGCTGAAACTATATTATTCCaattaatttgttttttggAAAACTTAAA CAAAACACtcaagaaaattttgtttgcaatgttaATTTTGTGGTGCACAC TGTATAAAACAtataacaaatattttttactgACTTGTTTCTTCATGTAG GCAAATATTATAGTCACTACAAataatttattatatttttttcttaatag GCTAAACTTAGTAACTTGAAGAGTTTGGATTTGTTTAACTGCGAAGTCAC TTGTGAAAAGGATTATCGGGCCAAAGTATTTGAGCTCATCCCGCAGCTGA AATTTCTTGATGGGGCTGACAGGTAACTTTTATGCTTATACCAGGATCAC TGTAAATAACTATTAATGAAATATAGTATTGTTGTATACCTGTTAGCCTT TTTAATCTACATTAATTATTGATGTTACTGTGTTGTATCACATCAGTTAT TTCACAATTCAAGGTATTGTTACCCGTTGGAATGCAATGTCTTATGAAGG ggatttttttgatttggtttgatcTGGTTTGATAATGAAAACAAGGTCCA TGTGGCATTTCTAATTGCCCTGCATTTAGAATACTTGCAGATTATTTTGG gtaataataaaacatatattgcATGTCTTCTTTTCAGTAAACTCACCTTG AGGTAATAAAATCAGAATATCTGATGAAAGGctaatcaatctgaatcaat atcTGCTTTATTGAATTGTATCAAATCAATGAAATATaatcaaaatgaat tttaatttttattattctttTTGTTCAGAGACGACAAAGAAATGGAAGAG TCTGAGTCaggtaattatttttctgattttaataataatattgaattttg agtttctgtcaaaataatttaccagCAGCTCGCGTTTGTCAAGTCGCATT GTCTGTCAACgatgtgattcctactccttcatgggtaggacccattcggG AGGGCTTATATCTATTTACCAAAACAAGATTAATACTAAACACCTCCCTC TAAAATCAACCAGTGAATGTGAAATTTAtttgagaattttactgaaAAGT GAcggtgaaaacaaaaattttgataaatttcctTCAAACACTTAGCAATG GTTGCCTCCCTTGATTATATTACTCTTACAGTAAATTGGACACAAAAGAT TAATTTCCAATTTTCACAGACTTTTATgattttaattgaaattttcacca attttacAGAAGGAGAAGAGGACGAAGAAGATGATGACGATGAAGAAGGC GAAGATGAAGGTATTATTTTTCACTTTGCATTTTCTGTTTATTTGAGGAT GTTCGACCTTTAAAGGGCATAGAAATTTTGCAAGGGACCACTCACATATC TATTTTCCCCATTGCTTACGTGAAAATGACGCAAAAGACCCTCCCACCCc ttgaaatttaatccccgcgaaagtttatcccattaaaaagtattcttaag aaattaaaaaaacaacagttttttctgttaaccaaataaaaaatgactgt attcttatccaAAATTTGTGAAACTCATCCTAGTGAGTATTCTAATATTC TTACGAATTGACCAagtttcaccctgatattcttatagaaggtatgctta taaaattaAATGCGTGTAAGTAattatcaaatttcaatttttcaaagtat aaGGTTTATGTCTCAAGGAGAATCTAGGCTAAATTGCTGTGTTTTAAATC CATTAACTGTCTCATCAAGACAAAAGACCATTTCCATTTATTTAGACGGT GTAGAGAATGGTGTAACAGAAGATGACGATGACGAGGATGAAGATACTGA AATTGTAGGTATCGATGATGAGGATGATGATGAATTGGAAGAAGAGGAAC TAGATGAAGATGCTGATGGTGGATTGGAAGAAATTGTTGATGGTGGTGAG GATGAAAATGAAGAGGATGATGAGGACGATGATGATGACGAAGAAGAAGT TGTCATCACTGCTGAAAATGATGGTTTATTTCTACTACATTTTTTCTACA TGCCTTTTTATTAGTATAGCATAAGCATATGCAGGTTCAAACCTTGAAAA AACAGATTTTGGCCAAGTCGGCCAAATTAagctttcaccaaaatttctaT CCTTAAGGTAGTCTGTTTCAATGACACATCTACAGCAGGATTTTTTTATT GAGAGGCTTTTTAGCTAATAACCTTTGTTAGGTCAGTAGCTAAGAAGCAT TAAATAACCAATTCTCTACAAGCTCTTCGAGTACTACGTTAAAATTCGCG GATGCTTGGTGGATTGTTTTGTTCTAATTGTCAACTTAAGAGCAAGAACC AACAATGTCAATGACACAATTTGCTTTCTACCCCGCCTTCCTTGTTAGAA GTCAGTTAAAAGTCAGCCGAGTATGCTGCACATCTACTGTGTAAAATCAA TGTAGCTCTTGACGTCAATGAAGTATCTTTTCTAagcaaatatttgaaag tttaaaaaagtgcACCGTCCAAGTTAAGTCTTTGATTCAGTCAAATAAAT ATATTAGTAGCAACATGTTTTCTACTCCAATTGATCAGGATTGATTGACA GagaagaagaagaggaagacgatgatgatgatgacgacGACGATGAATTA GAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGATTACCTCACTAAAGA AAACCTCTCTGTAAGTACAATTCAAGGGGTTTAAGATTATTCTTCTAGGT ATAACGTTTTAGTATTACAGAGAGACCTTTTATAAATTAGATAACGTCAA CAAAGAAAACCTTTCTGCAAGGACAATCCGAGCGAGTCTTTATCGAATTA GATATGgtgaaattttgagatggaaTTATATCAACTAAGAACAGTCCGTC CAATGGGTCAAGAAGCCTCCTTCGAAAGAGCTATTAGCTGAGTAGCTTCA TCCCTGTGAAAGTTTAACTACAATCCAATTGATTGTTTCCAAAAAACGTT TTGACCAATATTTTAATTTTCCCTTTCGGATCATTCAATGTCTGTAGTCA TGAATAAATGTTCGAAATGGGTATCAATGGTCTGCAATATGTAGGTAATT ACCCTTCTCAAGATTCGTTCTTACCAATATTTTAACTATTTAATTAATTA TAATTGTTAGGAGGAAGACGAAGACGAGGAAGATTTCAACCCTGAAGAAG TCgacgatgaagaagaagaactctctgaagaagaagaagagattATGGAA GAACAGAGAGGTGTCAAACGAAAACATGAAGGCGACCATTCACGTGCAGA TGAGGAGTCATAACATTGTCAATACATCATCAACACACAACAATTTAACT GCCGTGGGAAGAATCTTTTCATTGTTAACACCCTGGAGGTGTGGTATGGT TTATTGATGGCGAAAAGTGAGAAAGAATTAAACGGGTGAAGGATGATCTG CCGGTCAGACGCATTCTTTTGAAGTAGGCTGAAACACACGGCAATATTTT ATTATAGATAGAACTCCTGTGTTTTCTGGAATCCGAGAGTGATTCTTGGA CACGCTACTTGACAGAGACTTGCTTGATAAAAAGACCCTCAATGACTTAC GATGTTTTATTTTCCTCGTTTACAATGATGCCCAATTATTCCTGGAATTT AATAAATATCACAGTTTTATTCACCAAACATCACCATTACAGCATTTGCT AATCTTAaggttttttatttatattttatttatgactgggtttttttttt cacgtgCTCTTTAAAACCGTTttccctttgttttgaaatatgacTATCTG ATAGGTCAGGGTTGACTAAGCTAGCACCTAGAAAAGAATGATATTGATTA TACAAAGTCTCCCCTAGTTAAATACGGGGCTTGAAACTAAATTCACATTG GGACCGCAAGAAAAAAGATTCGGATCATATCGATATTTGCCATTTAAAGA TCTAATagaaaatgatgaaatcaaaCCTGATGAGCCAAACACCTGTAACA CAATAGGAAATTTTCAGAGGCCAGAAAGTAATGAAGTAAAAATGATTAAT CCtaagtattttttatcaatagtATATTATTACGTTTAAAAGTAAGGAAT GGAAAGGCAAGTGGTAAAAGAAATTTATCTTGTTTGTTATttgaaaacat aaaatatttttacgttGAACTGTTCGAATAGACCAAAAAAAGTTCTATCC CTGTATATATTGTATAATGTTTGTATAATTTGTTATGGCtaatttttagg caaaaagaaaAGTTATACGAACAGTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000846XLOC_000846Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001628-exon-sc0000011-1491911889:1055406..1055760TCONS_00001628-exon-sc0000011-1491911889:1055406..1055760Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1055406..1055760TCONS_00001628-exon-sc0000011-1510915933:1055406..1055760Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1055406..1055760TCONS_00001628-exon-sc0000011-1575043694:1055406..1055760Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1055875..1056018TCONS_00001628-exon-sc0000011-1491911889:1055875..1056018Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1055875..1056018TCONS_00001628-exon-sc0000011-1510915933:1055875..1056018Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1055875..1056018TCONS_00001628-exon-sc0000011-1575043694:1055875..1056018Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1058285..1058404TCONS_00001628-exon-sc0000011-1491911889:1058285..1058404Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1058285..1058404TCONS_00001628-exon-sc0000011-1510915933:1058285..1058404Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1058285..1058404TCONS_00001628-exon-sc0000011-1575043694:1058285..1058404Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1058606..1058727TCONS_00001628-exon-sc0000011-1491911889:1058606..1058727Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1058606..1058727TCONS_00001628-exon-sc0000011-1510915933:1058606..1058727Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1058606..1058727TCONS_00001628-exon-sc0000011-1575043694:1058606..1058727Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1059184..1059215TCONS_00001628-exon-sc0000011-1491911889:1059184..1059215Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1059184..1059215TCONS_00001628-exon-sc0000011-1510915933:1059184..1059215Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1059184..1059215TCONS_00001628-exon-sc0000011-1575043694:1059184..1059215Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1059615..1059665TCONS_00001628-exon-sc0000011-1491911889:1059615..1059665Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1059615..1059665TCONS_00001628-exon-sc0000011-1510915933:1059615..1059665Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1059615..1059665TCONS_00001628-exon-sc0000011-1575043694:1059615..1059665Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1060151..1060378TCONS_00001628-exon-sc0000011-1491911889:1060151..1060378Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1060151..1060378TCONS_00001628-exon-sc0000011-1510915933:1060151..1060378Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1060151..1060378TCONS_00001628-exon-sc0000011-1575043694:1060151..1060378Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1060944..1061065TCONS_00001628-exon-sc0000011-1491911889:1060944..1061065Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1060944..1061065TCONS_00001628-exon-sc0000011-1510915933:1060944..1061065Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1060944..1061065TCONS_00001628-exon-sc0000011-1575043694:1060944..1061065Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1061516..1062634TCONS_00001628-exon-sc0000011-1491911889:1061516..1062634Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1061516..1062634TCONS_00001628-exon-sc0000011-1510915933:1061516..1062634Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1061516..1062634TCONS_00001628-exon-sc0000011-1575043694:1061516..1062634Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:1055406..1062634 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.6428 21.1051 68.0869 72.5301 66.8704 55.9073 31.1713 31.4904 19.046 21.7328 18.6725 18.3851 12.9934 16.7458 15.5563 18.4472 30.0264 24.9792 6.11572 8.53288 23.5743 23.062 22.6164 28.5577 31.0316 38.7204 7.70088 4.81088 17.1802 18.1235
Blast
BLAST of TCONS_00001628 vs. Swiss-Prot (Human)
Match: AN32A (Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Homo sapiens GN=ANP32A PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.460e-33
Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 2
Query:  302 FEMENRIELERRGQEKKEITELNLDNTRST--SIVGLTDEYSNLEYLSLINVXXXXXXXXXXXXXXXXXXXSDNRISTGLDYLL-KLPGLAYLSLSGNRIKDFESLSPLAKLSNLKSLDLFNCEVTCEKDYRAKVFELIPQLKFLDG 733
             EM  RI LE R +   ++ EL LDN+RS    + GLTDE+  LE+LS INVGLT++  LP L KLKKLELSDNR+S GL+ L  K P L +L+LSGN+IKD  ++ PL KL NLKSLDLFNCEVT   DYR  VF+L+PQL +LDG
Sbjct:    1 MEMGRRIHLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147          
The following BLAST results are available for this feature:
BLAST of TCONS_00001628 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AN32A5.460e-3359.18Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
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