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XLOC_000846 (gene) - C. hemisphaerica

Overview
NameXLOC_000846
Unique NameXLOC_000846
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:1055167..1062634+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000846 ID=XLOC_000846|Name=XLOC_000846|organism=Clytia hemisphaerica|type=gene|length=7468bp|location=Sequence derived from alignment at sc0000011:1055167..1062634+ (Clytia hemisphaerica)
GTAGGAATGAAAATCAAGGTAGGAGAACGACTCAAAGGCCCAAATTGTTT CTGTAATTAGTTCGAAATTTctacttttccaaaatttagAAATCTCGGTG GTGCGGATAAAAACATTGAAGTCTGTATATTTTGCATAATTAACATAATT TGatatttactatttttgatTGGATAGAATATTTGTTTATATGCATatat tatgataaattattcgaAAACTTGTTTGCTCATTGGTTCATACTAATCAC GTGCTGTTTAGATCTTtgcataattatttcaaaagcTTGCCTTTTCAATC TTCAGCCCGCCGTAAATACTCACCAAGCTGGCCTATCATTCTTAGAACCA GTTTTGTGACTAAAGTCCAGTTATAAGCTGGTTTTTAGTCTGTTAGCTAA CTTGCCGAAACGTCGACATTTCGTCTCGCGAGATCGAAATCAAAATATAC CTTGTGGAATTTTATTGAGGTACTCTGAGCTTGTAGTTAAATTTGTGGAG AAATCTTGGGTTTTAGGTAGCGATTTCTTTTACTGGCAAATTTGAAATGG AAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAAAAGAGGTATGT TCTTCTATCTTTCTTGACACAGTTCCTATCAATTGTACTTTTTGATATAA AGATAAActttaaatatgatttttagcAGGTTGTTGtattatttgtttat gtttacaGATTACTGAACTCAACCTTGATAATACCAGATCCACTTCAATT GTTGGATTGACAGATGAATACTcaaatttggaatatctttcaTTGATCAA TGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaa aagtaagCACTGTCTGTGTAATTTTTCgtaaattaattttgaataatCAG TTGTCAATTTTATGTATTANGTAATTTTCGTAATTAATTTTGAATAGTCA GTTGTCATTTTTATGTATTACTTTcagatactttaatgggataaaatttc agGGACTCTGTGTGGATTTAGGTATCATCCTGACCTaactttgttgtcat ttctCTAGTCCTTCTAGACgagtgagaaaaaaaatgttttcacattacac atccctttagagttTTAGCGTTGCatgcagaaaacaatcacaatctgatc tcaggttttAGCTTGACCACACAATGTTTATTCCCTTCAAAATTTTAGTC CATTAAAGTTTAACCTTCTATCTTTGTGATATATTTTTTGCTGAACACAG GAGGCAAAAAGAGCTAGAAAGGCAGGACAGTGTCTGCTGCTCTAGATAGG CTGAAAAGAGCACTTTTTCTGTTGCTTTTTCATGTCTGATCACATAAGgc taaaaatgccttaaaatggtCTGAAATGACtaaatgtatttttgttttAC CCAAGTTCTAATGGATTTCTTTTACTTTTGTTGGAGTTCAATTCGGGAGT AGGGTTTTCAATATACAATAACTGGGCATATCACCAAACTAAATTTTAGc tgggacaaaaatcagttctTAGAGGGATATTTGTATCCTTACTAGGTTTG GTTTTGTTTGCAAAACTGCCCAATAATGTGAATGTTAAGAAGGGACACAT ACTTCTTTCCCCACACAAACCACCTACTGTGAGaccgggtaacttgcatc agtggaggctaacatgcttagccctcaaatgaatggcctggctggtcatt aatatacaaagttaaatcaaaacaaaaatggtagaacagagctgcgtagt tcatttttttgaaattttgctgttttaattggtcagtcatttCAGGGTTC GAATTAACGTATCGCGTTTCGCCATTCGCGATGCGTTTTTGGAAATgtag gaagcaaaaattcagaaatttaaCAAAATCGCGATACAACATATGAAGAA TTTTACAGCTCACTAAAGTACAATGGTTAAATTGGTCTTTAGAGTGGAGA ATGCATCGTATATTGATAAAAACGCATAATTAGCTCACTCCGTTCGCACA AAAGTGCGATGCACTTTTAAATAGTTAATTCGATCCATGCATTTAATAGC TATACAAGTTTCCCTCtgctgatgcaagttacccaacttcacggtacCAT AAATGTCACATCTTGCAAAATAAAcgttttatagcaaaatttgaGACACT ATTCATGCTTTGATATAAATTTCAGTTGCTAGATATAACATAGAGAAACA AGGAAAAGTTTAACTTTCTTTGCAAGCACTATTACTGAGTTACATCAGCT ctagacaggagaaccgtccTGTATTCTTGTAAaggaataacaaaatttga ttggccaTGTTTTCAACTgtcattaggatctgggaaataataataataaa taataccGGGtaacccacgaaaaagttcagacgcttcccgacgtcttgag gccgaaaaaatgtcccaaagtgcttggagttttgatatttagaaagtaga tatcctaacttaaaatttgggccatcactttttaaatttgactaacttgt tctctacttatgagcatttaaagtcaaaattcacttttcgaaaagtgtaa aaaacacgtaaaaaagaggtattaaattcacgcaatcaattagaaaatca cttacaattgacttatttaacgagttttatgacattaataataataaaaa cacctttgaaagtagtttttgtttaaaacaagactagtttttaaaaaaaa ttggcgctttcatagatttttttcaaaaactgtatataaaaaacgtctaa aaatatcaaatttaataccccttttttacgtattttttacactttccgta aagtgaattttgactttaaaagagaacaagttggtcaaatttaaaaagtg atagctcaaattttaatttaggatatctactttctaaatatcaaaactcc aagcactttgggacatttgttcggcctcaagacgtcgggaaacgtctgaa ctttttcgtgggtcacccggtagaataagaaatcatagcatggatctcca ggctaacaTCAGCTCTTGAAGTGATTCAtcatttttctctgattttaaat ttaatgttttgttgATCTAAAAACCAGGTGtataggtccataaaagtatc attttttgtcttttttagctTGAGCTGAGTGACAATAGGATATCAACAGG ATTGGATTATTTACTAAAATTACCTGGTTTAGCTTACCTCAGTCTCAGTG GAAACAGaatcaaagactttgaaagcCTTTCTCCATTGGTAAGCTGAAAC TATATTATTCCaattaatttgttttttggAAAACTTAAACAAAACACtca agaaaattttgtttgcaatgttaATTTTGTGGTGCACACTGTATAAAACA tataacaaatattttttactgACTTGTTTCTTCATGTAGGCAAATATTAT AGTCACTACAAataatttattatatttttttcttaatagGCTAAACTTAG TAACTTGAAGAGTTTGGATTTGTTTAACTGCGAAGTCACTTGTGAAAAGG ATTATCGGGCCAAAGTATTTGAGCTCATCCCGCAGCTGAAATTTCTTGAT GGGGCTGACAGGTAACTTTTATGCTTATACCAGGATCACTGTAAATAACT ATTAATGAAATATAGTATTGTTGTATACCTGTTAGCCTTTTTAATCTACA TTAATTATTGATGTTACTGTGTTGTATCACATCAGTTATTTCACAATTCA AGGTATTGTTACCCGTTGGAATGCAATGTCTTATGAAGGggatttttttg atttggtttgatcTGGTTTGATAATGAAAACAAGGTCCATGTGGCATTTC TAATTGCCCTGCATTTAGAATACTTGCAGATTATTTTGGgtaataataaa acatatattgcATGTCTTCTTTTCAGTAAACTCACCTTGAGGTAATAAAA TCAGAATATCTGATGAAAGGctaatcaatctgaatcaatatcTGCTTTAT TGAATTGTATCAAATCAATGAAATATaatcaaaatgaattttaattttta ttattctttTTGTTCAGAGACGACAAAGAAATGGAAGAGTCTGAGTCagg taattatttttctgattttaataataatattgaattttgagtttctgtca aaataatttaccagCAGCTCGCGTTTGTCAAGTCGCATTGTCTGTCAACg atgtgattcctactccttcatgggtaggacccattcggGAGGGCTTATAT CTATTTACCAAAACAAGATTAATACTAAACACCTCCCTCTAAAATCAACC AGTGAATGTGAAATTTAtttgagaattttactgaaAAGTGAcggtgaaaa caaaaattttgataaatttcctTCAAACACTTAGCAATGGTTGCCTCCCT TGATTATATTACTCTTACAGTAAATTGGACACAAAAGATTAATTTCCAAT TTTCACAGACTTTTATgattttaattgaaattttcaccaattttacAGAA GGAGAAGAGGACGAAGAAGATGATGACGATGAAGAAGGCGAAGATGAAGG TATTATTTTTCACTTTGCATTTTCTGTTTATTTGAGGATGTTCGACCTTT AAAGGGCATAGAAATTTTGCAAGGGACCACTCACATATCTATTTTCCCCA TTGCTTACGTGAAAATGACGCAAAAGACCCTCCCACCCcttgaaatttaa tccccgcgaaagtttatcccattaaaaagtattcttaagaaattaaaaaa acaacagttttttctgttaaccaaataaaaaatgactgtattcttatcca AAATTTGTGAAACTCATCCTAGTGAGTATTCTAATATTCTTACGAATTGA CCAagtttcaccctgatattcttatagaaggtatgcttataaaattaAAT GCGTGTAAGTAattatcaaatttcaatttttcaaagtataaGGTTTATGT CTCAAGGAGAATCTAGGCTAAATTGCTGTGTTTTAAATCCATTAACTGTC TCATCAAGACAAAAGACCATTTCCATTTATTTAGACGGTGTAGAGAATGG TGTAACAGAAGATGACGATGACGAGGATGAAGATACTGAAATTGTAGGTA TCGATGATGAGGATGATGATGAATTGGAAGAAGAGGAACTAGATGAAGAT GCTGATGGTGGATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAATGA AGAGGATGATGAGGACGATGATGATGACGAAGAAGAAGTTGTCATCACTG CTGAAAATGATGGTTTATTTCTACTACATTTTTTCTACATGCCTTTTTAT TAGTATAGCATAAGCATATGCAGGTTCAAACCTTGAAAAAACAGATTTTG GCCAAGTCGGCCAAATTAagctttcaccaaaatttctaTCCTTAAGGTAG TCTGTTTCAATGACACATCTACAGCAGGATTTTTTTATTGAGAGGCTTTT TAGCTAATAACCTTTGTTAGGTCAGTAGCTAAGAAGCATTAAATAACCAA TTCTCTACAAGCTCTTCGAGTACTACGTTAAAATTCGCGGATGCTTGGTG GATTGTTTTGTTCTAATTGTCAACTTAAGAGCAAGAACCAACAATGTCAA TGACACAATTTGCTTTCTACCCCGCCTTCCTTGTTAGAAGTCAGTTAAAA GTCAGCCGAGTATGCTGCACATCTACTGTGTAAAATCAATGTAGCTCTTG ACGTCAATGAAGTATCTTTTCTAagcaaatatttgaaagtttaaaaaagt gcACCGTCCAAGTTAAGTCTTTGATTCAGTCAAATAAATATATTAGTAGC AACATGTTTTCTACTCCAATTGATCAGGATTGATTGACAGagaagaagaa gaggaagacgatgatgatgatgacgacGACGATGAATTAGAAGAAAGTGA CGAAGACGAAGAACTTGGTTTGGATTACCTCACTAAAGAAAACCTCTCTG TAAGTACAATTCAAGGGGTTTAAGATTATTCTTCTAGGTATAACGTTTTA GTATTACAGAGAGACCTTTTATAAATTAGATAACGTCAACAAAGAAAACC TTTCTGCAAGGACAATCCGAGCGAGTCTTTATCGAATTAGATATGgtgaa attttgagatggaaTTATATCAACTAAGAACAGTCCGTCCAATGGGTCAA GAAGCCTCCTTCGAAAGAGCTATTAGCTGAGTAGCTTCATCCCTGTGAAA GTTTAACTACAATCCAATTGATTGTTTCCAAAAAACGTTTTGACCAATAT TTTAATTTTCCCTTTCGGATCATTCAATGTCTGTAGTCATGAATAAATGT TCGAAATGGGTATCAATGGTCTGCAATATGTAGGTAATTACCCTTCTCAA GATTCGTTCTTACCAATATTTTAACTATTTAATTAATTATAATTGTTAGG AGGAAGACGAAGACGAGGAAGATTTCAACCCTGAAGAAGTCgacgatgaa gaagaagaactctctgaagaagaagaagagattATGGAAGAACAGAGAGG TGTCAAACGAAAACATGAAGGCGACCATTCACGTGCAGATGAGGAGTCAT AACATTGTCAATACATCATCAACACACAACAATTTAACTGCCGTGGGAAG AATCTTTTCATTGTTAACACCCTGGAGGTGTGGTATGGTTTATTGATGGC GAAAAGTGAGAAAGAATTAAACGGGTGAAGGATGATCTGCCGGTCAGACG CATTCTTTTGAAGTAGGCTGAAACACACGGCAATATTTTATTATAGATAG AACTCCTGTGTTTTCTGGAATCCGAGAGTGATTCTTGGACACGCTACTTG ACAGAGACTTGCTTGATAAAAAGACCCTCAATGACTTACGATGTTTTATT TTCCTCGTTTACAATGATGCCCAATTATTCCTGGAATTTAATAAATATCA CAGTTTTATTCACCAAACATCACCATTACAGCATTTGCTAATCTTAaggt tttttatttatattttatttatgactgggttttttttttcacgtgCTCTT TAAAACCGTTttccctttgttttgaaatatgacTATCTGATAGGTCAGGG TTGACTAAGCTAGCACCTAGAAAAGAATGATATTGATTATACAAAGTCTC CCCTAGTTAAATACGGGGCTTGAAACTAAATTCACATTGGGACCGCAAGA AAAAAGATTCGGATCATATCGATATTTGCCATTTAAAGATCTAATagaaa atgatgaaatcaaaCCTGATGAGCCAAACACCTGTAACACAATAGGAAAT TTTCAGAGGCCAGAAAGTAATGAAGTAAAAATGATTAATCCtaagtattt tttatcaatagtATATTATTACGTTTAAAAGTAAGGAATGGAAAGGCAAG TGGTAAAAGAAATTTATCTTGTTTGTTATttgaaaacataaaatattttt acgttGAACTGTTCGAATAGACCAAAAAAAGTTCTATCCCTGTATATATT GTATAATGTTTGTATAATTTGTTATGGCtaatttttaggcaaaaagaaaA GTTATACGAACAGTAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001627TCONS_00001627Clytia hemisphaericatranscript
TCONS_00001628TCONS_00001628Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001627-proteinTCONS_00001627-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:1055167..1062634 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ANP32Aacidic leucine-rich nuclear phosphoprotein 32 family member A Homo Sapiens
ANP32Cacidic leucine-rich nuclear phosphoprotein 32 family member C Homo Sapiens
ANP32Bacidic leucine-rich nuclear phosphoprotein 32 family member B Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
73.42 68.38 221.49 221.07 256.26 186.53 125.64 131.66 73.21 72.3 60.02 57.44 41.36 44.54 46.57 57.17 92.16 92.71 27.38 28.48 66.18 60.18 74.91 73.05 94.95 104.11 24.02 15.79 43.56 48.19