TCONS_00001628 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001628
Unique NameTCONS_00001628
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2293

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001628 ID=TCONS_00001628|Name=TCONS_00001628|organism=Clytia hemisphaerica|type=transcript|length=2293bp
ATACTAATCACGTGCTGTTTAGATCTTtgcataattatttcaaaagcTTG
CCTTTTCAATCTTCAGCCCGCCGTAAATACTCACCAAGCTGGCCTATCAT
TCTTAGAACCAGTTTTGTGACTAAAGTCCAGTTATAAGCTGGTTTTTAGT
CTGTTAGCTAACTTGCCGAAACGTCGACATTTCGTCTCGCGAGATCGAAA
TCAAAATATACCTTGTGGAATTTTATTGAGGTACTCTGAGCTTGTAGTTA
AATTTGTGGAGAAATCTTGGGTTTTAGGTAGCGATTTCTTTTACTGGCAA
ATTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAA
AAGAGATTACTGAACTCAACCTTGATAATACCAGATCCACTTCAATTGTT
GGATTGACAGATGAATACTcaaatttggaatatctttcaTTGATCAATGT
TGGGTTAACAACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaaaac
tTGAGCTGAGTGACAATAGGATATCAACAGGATTGGATTATTTACTAAAA
TTACCTGGTTTAGCTTACCTCAGTCTCAGTGGAAACAGaatcaaagactt
tgaaagcCTTTCTCCATTGGCTAAACTTAGTAACTTGAAGAGTTTGGATT
TGTTTAACTGCGAAGTCACTTGTGAAAAGGATTATCGGGCCAAAGTATTT
GAGCTCATCCCGCAGCTGAAATTTCTTGATGGGGCTGACAGAGACGACAA
AGAAATGGAAGAGTCTGAGTCagAAGGAGAAGAGGACGAAGAAGATGATG
ACGATGAAGAAGGCGAAGATGAAGACGGTGTAGAGAATGGTGTAACAGAA
GATGACGATGACGAGGATGAAGATACTGAAATTGTAGGTATCGATGATGA
GGATGATGATGAATTGGAAGAAGAGGAACTAGATGAAGATGCTGATGGTG
GATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAATGAAGAGGATGAT
GAGGACGATGATGATGACGAAGAAGAAGTTGTCATCACTGCTGAAAATGA
TGGATTGATTGACAGagaagaagaagaggaagacgatgatgatgatgacg
acGACGATGAATTAGAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGAT
TACCTCACTAAAGAAAACCTCTCTGAGGAAGACGAAGACGAGGAAGATTT
CAACCCTGAAGAAGTCgacgatgaagaagaagaactctctgaagaagaag
aagagattATGGAAGAACAGAGAGGTGTCAAACGAAAACATGAAGGCGAC
CATTCACGTGCAGATGAGGAGTCATAACATTGTCAATACATCATCAACAC
ACAACAATTTAACTGCCGTGGGAAGAATCTTTTCATTGTTAACACCCTGG
AGGTGTGGTATGGTTTATTGATGGCGAAAAGTGAGAAAGAATTAAACGGG
TGAAGGATGATCTGCCGGTCAGACGCATTCTTTTGAAGTAGGCTGAAACA
CACGGCAATATTTTATTATAGATAGAACTCCTGTGTTTTCTGGAATCCGA
GAGTGATTCTTGGACACGCTACTTGACAGAGACTTGCTTGATAAAAAGAC
CCTCAATGACTTACGATGTTTTATTTTCCTCGTTTACAATGATGCCCAAT
TATTCCTGGAATTTAATAAATATCACAGTTTTATTCACCAAACATCACCA
TTACAGCATTTGCTAATCTTAaggttttttatttatattttatttatgac
tgggttttttttttcacgtgCTCTTTAAAACCGTTttccctttgttttga
aatatgacTATCTGATAGGTCAGGGTTGACTAAGCTAGCACCTAGAAAAG
AATGATATTGATTATACAAAGTCTCCCCTAGTTAAATACGGGGCTTGAAA
CTAAATTCACATTGGGACCGCAAGAAAAAAGATTCGGATCATATCGATAT
TTGCCATTTAAAGATCTAATagaaaatgatgaaatcaaaCCTGATGAGCC
AAACACCTGTAACACAATAGGAAATTTTCAGAGGCCAGAAAGTAATGAAG
TAAAAATGATTAATCCtaagtattttttatcaatagtATATTATTACGTT
TAAAAGTAAGGAATGGAAAGGCAAGTGGTAAAAGAAATTTATCTTGTTTG
TTATttgaaaacataaaatatttttacgttGAACTGTTCGAATAGACCAA
AAAAAGTTCTATCCCTGTATATATTGTATAATGTTTGTATAATTTGTTAT
GGCtaatttttaggcaaaaagaaaAGTTATACGAACAGTAAAT
Run BLAST on NCBI

transcript from alignment at sc0000011:1055406..1062634+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001628 ID=TCONS_00001628|Name=TCONS_00001628|organism=Clytia hemisphaerica|type=transcript|length=7229bp|location=Sequence derived from alignment at sc0000011:1055406..1062634+ (Clytia hemisphaerica)
ATACTAATCACGTGCTGTTTAGATCTTtgcataattatttcaaaagcTTG
CCTTTTCAATCTTCAGCCCGCCGTAAATACTCACCAAGCTGGCCTATCAT
TCTTAGAACCAGTTTTGTGACTAAAGTCCAGTTATAAGCTGGTTTTTAGT
CTGTTAGCTAACTTGCCGAAACGTCGACATTTCGTCTCGCGAGATCGAAA
TCAAAATATACCTTGTGGAATTTTATTGAGGTACTCTGAGCTTGTAGTTA
AATTTGTGGAGAAATCTTGGGTTTTAGGTAGCGATTTCTTTTACTGGCAA
ATTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAA
AAGAGGTATGTTCTTCTATCTTTCTTGACACAGTTCCTATCAATTGTACT
TTTTGATATAAAGATAAActttaaatatgatttttagcAGGTTGTTGtat
tatttgtttatgtttacaGATTACTGAACTCAACCTTGATAATACCAGAT
CCACTTCAATTGTTGGATTGACAGATGAATACTcaaatttggaatatctt
tcaTTGATCAATGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACttga
gaaattaaaaaaagtaagCACTGTCTGTGTAATTTTTCgtaaattaattt
tgaataatCAGTTGTCAATTTTATGTATTANGTAATTTTCGTAATTAATT
TTGAATAGTCAGTTGTCATTTTTATGTATTACTTTcagatactttaatgg
gataaaatttcagGGACTCTGTGTGGATTTAGGTATCATCCTGACCTaac
tttgttgtcatttctCTAGTCCTTCTAGACgagtgagaaaaaaaatgttt
tcacattacacatccctttagagttTTAGCGTTGCatgcagaaaacaatc
acaatctgatctcaggttttAGCTTGACCACACAATGTTTATTCCCTTCA
AAATTTTAGTCCATTAAAGTTTAACCTTCTATCTTTGTGATATATTTTTT
GCTGAACACAGGAGGCAAAAAGAGCTAGAAAGGCAGGACAGTGTCTGCTG
CTCTAGATAGGCTGAAAAGAGCACTTTTTCTGTTGCTTTTTCATGTCTGA
TCACATAAGgctaaaaatgccttaaaatggtCTGAAATGACtaaatgtat
ttttgttttACCCAAGTTCTAATGGATTTCTTTTACTTTTGTTGGAGTTC
AATTCGGGAGTAGGGTTTTCAATATACAATAACTGGGCATATCACCAAAC
TAAATTTTAGctgggacaaaaatcagttctTAGAGGGATATTTGTATCCT
TACTAGGTTTGGTTTTGTTTGCAAAACTGCCCAATAATGTGAATGTTAAG
AAGGGACACATACTTCTTTCCCCACACAAACCACCTACTGTGAGaccggg
taacttgcatcagtggaggctaacatgcttagccctcaaatgaatggcct
ggctggtcattaatatacaaagttaaatcaaaacaaaaatggtagaacag
agctgcgtagttcatttttttgaaattttgctgttttaattggtcagtca
tttCAGGGTTCGAATTAACGTATCGCGTTTCGCCATTCGCGATGCGTTTT
TGGAAATgtaggaagcaaaaattcagaaatttaaCAAAATCGCGATACAA
CATATGAAGAATTTTACAGCTCACTAAAGTACAATGGTTAAATTGGTCTT
TAGAGTGGAGAATGCATCGTATATTGATAAAAACGCATAATTAGCTCACT
CCGTTCGCACAAAAGTGCGATGCACTTTTAAATAGTTAATTCGATCCATG
CATTTAATAGCTATACAAGTTTCCCTCtgctgatgcaagttacccaactt
cacggtacCATAAATGTCACATCTTGCAAAATAAAcgttttatagcaaaa
tttgaGACACTATTCATGCTTTGATATAAATTTCAGTTGCTAGATATAAC
ATAGAGAAACAAGGAAAAGTTTAACTTTCTTTGCAAGCACTATTACTGAG
TTACATCAGCTctagacaggagaaccgtccTGTATTCTTGTAAaggaata
acaaaatttgattggccaTGTTTTCAACTgtcattaggatctgggaaata
ataataataaataataccGGGtaacccacgaaaaagttcagacgcttccc
gacgtcttgaggccgaaaaaatgtcccaaagtgcttggagttttgatatt
tagaaagtagatatcctaacttaaaatttgggccatcactttttaaattt
gactaacttgttctctacttatgagcatttaaagtcaaaattcacttttc
gaaaagtgtaaaaaacacgtaaaaaagaggtattaaattcacgcaatcaa
ttagaaaatcacttacaattgacttatttaacgagttttatgacattaat
aataataaaaacacctttgaaagtagtttttgtttaaaacaagactagtt
tttaaaaaaaattggcgctttcatagatttttttcaaaaactgtatataa
aaaacgtctaaaaatatcaaatttaataccccttttttacgtatttttta
cactttccgtaaagtgaattttgactttaaaagagaacaagttggtcaaa
tttaaaaagtgatagctcaaattttaatttaggatatctactttctaaat
atcaaaactccaagcactttgggacatttgttcggcctcaagacgtcggg
aaacgtctgaactttttcgtgggtcacccggtagaataagaaatcatagc
atggatctccaggctaacaTCAGCTCTTGAAGTGATTCAtcatttttctc
tgattttaaatttaatgttttgttgATCTAAAAACCAGGTGtataggtcc
ataaaagtatcattttttgtcttttttagctTGAGCTGAGTGACAATAGG
ATATCAACAGGATTGGATTATTTACTAAAATTACCTGGTTTAGCTTACCT
CAGTCTCAGTGGAAACAGaatcaaagactttgaaagcCTTTCTCCATTGG
TAAGCTGAAACTATATTATTCCaattaatttgttttttggAAAACTTAAA
CAAAACACtcaagaaaattttgtttgcaatgttaATTTTGTGGTGCACAC
TGTATAAAACAtataacaaatattttttactgACTTGTTTCTTCATGTAG
GCAAATATTATAGTCACTACAAataatttattatatttttttcttaatag
GCTAAACTTAGTAACTTGAAGAGTTTGGATTTGTTTAACTGCGAAGTCAC
TTGTGAAAAGGATTATCGGGCCAAAGTATTTGAGCTCATCCCGCAGCTGA
AATTTCTTGATGGGGCTGACAGGTAACTTTTATGCTTATACCAGGATCAC
TGTAAATAACTATTAATGAAATATAGTATTGTTGTATACCTGTTAGCCTT
TTTAATCTACATTAATTATTGATGTTACTGTGTTGTATCACATCAGTTAT
TTCACAATTCAAGGTATTGTTACCCGTTGGAATGCAATGTCTTATGAAGG
ggatttttttgatttggtttgatcTGGTTTGATAATGAAAACAAGGTCCA
TGTGGCATTTCTAATTGCCCTGCATTTAGAATACTTGCAGATTATTTTGG
gtaataataaaacatatattgcATGTCTTCTTTTCAGTAAACTCACCTTG
AGGTAATAAAATCAGAATATCTGATGAAAGGctaatcaatctgaatcaat
atcTGCTTTATTGAATTGTATCAAATCAATGAAATATaatcaaaatgaat
tttaatttttattattctttTTGTTCAGAGACGACAAAGAAATGGAAGAG
TCTGAGTCaggtaattatttttctgattttaataataatattgaattttg
agtttctgtcaaaataatttaccagCAGCTCGCGTTTGTCAAGTCGCATT
GTCTGTCAACgatgtgattcctactccttcatgggtaggacccattcggG
AGGGCTTATATCTATTTACCAAAACAAGATTAATACTAAACACCTCCCTC
TAAAATCAACCAGTGAATGTGAAATTTAtttgagaattttactgaaAAGT
GAcggtgaaaacaaaaattttgataaatttcctTCAAACACTTAGCAATG
GTTGCCTCCCTTGATTATATTACTCTTACAGTAAATTGGACACAAAAGAT
TAATTTCCAATTTTCACAGACTTTTATgattttaattgaaattttcacca
attttacAGAAGGAGAAGAGGACGAAGAAGATGATGACGATGAAGAAGGC
GAAGATGAAGGTATTATTTTTCACTTTGCATTTTCTGTTTATTTGAGGAT
GTTCGACCTTTAAAGGGCATAGAAATTTTGCAAGGGACCACTCACATATC
TATTTTCCCCATTGCTTACGTGAAAATGACGCAAAAGACCCTCCCACCCc
ttgaaatttaatccccgcgaaagtttatcccattaaaaagtattcttaag
aaattaaaaaaacaacagttttttctgttaaccaaataaaaaatgactgt
attcttatccaAAATTTGTGAAACTCATCCTAGTGAGTATTCTAATATTC
TTACGAATTGACCAagtttcaccctgatattcttatagaaggtatgctta
taaaattaAATGCGTGTAAGTAattatcaaatttcaatttttcaaagtat
aaGGTTTATGTCTCAAGGAGAATCTAGGCTAAATTGCTGTGTTTTAAATC
CATTAACTGTCTCATCAAGACAAAAGACCATTTCCATTTATTTAGACGGT
GTAGAGAATGGTGTAACAGAAGATGACGATGACGAGGATGAAGATACTGA
AATTGTAGGTATCGATGATGAGGATGATGATGAATTGGAAGAAGAGGAAC
TAGATGAAGATGCTGATGGTGGATTGGAAGAAATTGTTGATGGTGGTGAG
GATGAAAATGAAGAGGATGATGAGGACGATGATGATGACGAAGAAGAAGT
TGTCATCACTGCTGAAAATGATGGTTTATTTCTACTACATTTTTTCTACA
TGCCTTTTTATTAGTATAGCATAAGCATATGCAGGTTCAAACCTTGAAAA
AACAGATTTTGGCCAAGTCGGCCAAATTAagctttcaccaaaatttctaT
CCTTAAGGTAGTCTGTTTCAATGACACATCTACAGCAGGATTTTTTTATT
GAGAGGCTTTTTAGCTAATAACCTTTGTTAGGTCAGTAGCTAAGAAGCAT
TAAATAACCAATTCTCTACAAGCTCTTCGAGTACTACGTTAAAATTCGCG
GATGCTTGGTGGATTGTTTTGTTCTAATTGTCAACTTAAGAGCAAGAACC
AACAATGTCAATGACACAATTTGCTTTCTACCCCGCCTTCCTTGTTAGAA
GTCAGTTAAAAGTCAGCCGAGTATGCTGCACATCTACTGTGTAAAATCAA
TGTAGCTCTTGACGTCAATGAAGTATCTTTTCTAagcaaatatttgaaag
tttaaaaaagtgcACCGTCCAAGTTAAGTCTTTGATTCAGTCAAATAAAT
ATATTAGTAGCAACATGTTTTCTACTCCAATTGATCAGGATTGATTGACA
GagaagaagaagaggaagacgatgatgatgatgacgacGACGATGAATTA
GAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGATTACCTCACTAAAGA
AAACCTCTCTGTAAGTACAATTCAAGGGGTTTAAGATTATTCTTCTAGGT
ATAACGTTTTAGTATTACAGAGAGACCTTTTATAAATTAGATAACGTCAA
CAAAGAAAACCTTTCTGCAAGGACAATCCGAGCGAGTCTTTATCGAATTA
GATATGgtgaaattttgagatggaaTTATATCAACTAAGAACAGTCCGTC
CAATGGGTCAAGAAGCCTCCTTCGAAAGAGCTATTAGCTGAGTAGCTTCA
TCCCTGTGAAAGTTTAACTACAATCCAATTGATTGTTTCCAAAAAACGTT
TTGACCAATATTTTAATTTTCCCTTTCGGATCATTCAATGTCTGTAGTCA
TGAATAAATGTTCGAAATGGGTATCAATGGTCTGCAATATGTAGGTAATT
ACCCTTCTCAAGATTCGTTCTTACCAATATTTTAACTATTTAATTAATTA
TAATTGTTAGGAGGAAGACGAAGACGAGGAAGATTTCAACCCTGAAGAAG
TCgacgatgaagaagaagaactctctgaagaagaagaagagattATGGAA
GAACAGAGAGGTGTCAAACGAAAACATGAAGGCGACCATTCACGTGCAGA
TGAGGAGTCATAACATTGTCAATACATCATCAACACACAACAATTTAACT
GCCGTGGGAAGAATCTTTTCATTGTTAACACCCTGGAGGTGTGGTATGGT
TTATTGATGGCGAAAAGTGAGAAAGAATTAAACGGGTGAAGGATGATCTG
CCGGTCAGACGCATTCTTTTGAAGTAGGCTGAAACACACGGCAATATTTT
ATTATAGATAGAACTCCTGTGTTTTCTGGAATCCGAGAGTGATTCTTGGA
CACGCTACTTGACAGAGACTTGCTTGATAAAAAGACCCTCAATGACTTAC
GATGTTTTATTTTCCTCGTTTACAATGATGCCCAATTATTCCTGGAATTT
AATAAATATCACAGTTTTATTCACCAAACATCACCATTACAGCATTTGCT
AATCTTAaggttttttatttatattttatttatgactgggtttttttttt
cacgtgCTCTTTAAAACCGTTttccctttgttttgaaatatgacTATCTG
ATAGGTCAGGGTTGACTAAGCTAGCACCTAGAAAAGAATGATATTGATTA
TACAAAGTCTCCCCTAGTTAAATACGGGGCTTGAAACTAAATTCACATTG
GGACCGCAAGAAAAAAGATTCGGATCATATCGATATTTGCCATTTAAAGA
TCTAATagaaaatgatgaaatcaaaCCTGATGAGCCAAACACCTGTAACA
CAATAGGAAATTTTCAGAGGCCAGAAAGTAATGAAGTAAAAATGATTAAT
CCtaagtattttttatcaatagtATATTATTACGTTTAAAAGTAAGGAAT
GGAAAGGCAAGTGGTAAAAGAAATTTATCTTGTTTGTTATttgaaaacat
aaaatatttttacgttGAACTGTTCGAATAGACCAAAAAAAGTTCTATCC
CTGTATATATTGTATAATGTTTGTATAATTTGTTATGGCtaatttttagg
caaaaagaaaAGTTATACGAACAGTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000846XLOC_000846Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001628-exon-sc0000011-1491911889:1055406..1055760TCONS_00001628-exon-sc0000011-1491911889:1055406..1055760Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1055406..1055760TCONS_00001628-exon-sc0000011-1510915933:1055406..1055760Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1055406..1055760TCONS_00001628-exon-sc0000011-1575043694:1055406..1055760Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1055875..1056018TCONS_00001628-exon-sc0000011-1491911889:1055875..1056018Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1055875..1056018TCONS_00001628-exon-sc0000011-1510915933:1055875..1056018Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1055875..1056018TCONS_00001628-exon-sc0000011-1575043694:1055875..1056018Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1058285..1058404TCONS_00001628-exon-sc0000011-1491911889:1058285..1058404Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1058285..1058404TCONS_00001628-exon-sc0000011-1510915933:1058285..1058404Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1058285..1058404TCONS_00001628-exon-sc0000011-1575043694:1058285..1058404Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1058606..1058727TCONS_00001628-exon-sc0000011-1491911889:1058606..1058727Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1058606..1058727TCONS_00001628-exon-sc0000011-1510915933:1058606..1058727Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1058606..1058727TCONS_00001628-exon-sc0000011-1575043694:1058606..1058727Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1059184..1059215TCONS_00001628-exon-sc0000011-1491911889:1059184..1059215Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1059184..1059215TCONS_00001628-exon-sc0000011-1510915933:1059184..1059215Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1059184..1059215TCONS_00001628-exon-sc0000011-1575043694:1059184..1059215Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1059615..1059665TCONS_00001628-exon-sc0000011-1491911889:1059615..1059665Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1059615..1059665TCONS_00001628-exon-sc0000011-1510915933:1059615..1059665Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1059615..1059665TCONS_00001628-exon-sc0000011-1575043694:1059615..1059665Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1060151..1060378TCONS_00001628-exon-sc0000011-1491911889:1060151..1060378Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1060151..1060378TCONS_00001628-exon-sc0000011-1510915933:1060151..1060378Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1060151..1060378TCONS_00001628-exon-sc0000011-1575043694:1060151..1060378Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1060944..1061065TCONS_00001628-exon-sc0000011-1491911889:1060944..1061065Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1060944..1061065TCONS_00001628-exon-sc0000011-1510915933:1060944..1061065Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1060944..1061065TCONS_00001628-exon-sc0000011-1575043694:1060944..1061065Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1491911889:1061516..1062634TCONS_00001628-exon-sc0000011-1491911889:1061516..1062634Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1510915933:1061516..1062634TCONS_00001628-exon-sc0000011-1510915933:1061516..1062634Clytia hemisphaericaexon
TCONS_00001628-exon-sc0000011-1575043694:1061516..1062634TCONS_00001628-exon-sc0000011-1575043694:1061516..1062634Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:1055406..1062634 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.6428	21.1051	68.0869	72.5301	66.8704	55.9073	31.1713	31.4904	19.046	21.7328	18.6725	18.3851	12.9934	16.7458	15.5563	18.4472	30.0264	24.9792	6.11572	8.53288	23.5743	23.062	22.6164	28.5577	31.0316	38.7204	7.70088	4.81088	17.1802	18.1235
Blast
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BLAST of TCONS_00001628 vs. Swiss-Prot (Human)
Match: AN32A (Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Homo sapiens GN=ANP32A PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.460e-33
Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 2 
Query:  302 FEMENRIELERRGQEKKEITELNLDNTRST--SIVGLTDEYSNLEYLSLINVXXXXXXXXXXXXXXXXXXXSDNRISTGLDYLL-KLPGLAYLSLSGNRIKDFESLSPLAKLSNLKSLDLFNCEVTCEKDYRAKVFELIPQLKFLDG 733
             EM  RI LE R +   ++ EL LDN+RS    + GLTDE+  LE+LS INVGLT++  LP L KLKKLELSDNR+S GL+ L  K P L +L+LSGN+IKD  ++ PL KL NLKSLDLFNCEVT   DYR  VF+L+PQL +LDG
Sbjct:    1 MEMGRRIHLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147
The following BLAST results are available for this feature:
BLAST of TCONS_00001628 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AN32A5.460e-3359.18Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
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