TCONS_00001627 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001627
Unique NameTCONS_00001627
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2034

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001627 ID=TCONS_00001627|Name=TCONS_00001627|organism=Clytia hemisphaerica|type=transcript|length=2034bp
GTAGGAATGAAAATCAAGGTAGCGATTTCTTTTACTGGCAAATTTGAAAT
GGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAAAAGAGATTA
CTGAACTCAACCTTGATAATACCAGATCCACTTCAATTGTTGGATTGACA
GATGAATACTcaaatttggaatatctttcaTTGATCAATGTTGGGTTAAC
AACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaaaactTGAGCTGA
GTGACAATAGGATATCAACAGGATTGGATTATTTACTAAAATTACCTGGT
TTAGCTTACCTCAGTCTCAGTGGAAACAGaatcaaagactttgaaagcCT
TTCTCCATTGGCTAAACTTAGTAACTTGAAGAGTTTGGATTTGTTTAACT
GCGAAGTCACTTGTGAAAAGGATTATCGGGCCAAAGTATTTGAGCTCATC
CCGCAGCTGAAATTTCTTGATGGGGCTGACAGAGACGACAAAGAAATGGA
AGAGTCTGAGTCagAAGGAGAAGAGGACGAAGAAGATGATGACGATGAAG
AAGGCGAAGATGAAGACGGTGTAGAGAATGGTGTAACAGAAGATGACGAT
GACGAGGATGAAGATACTGAAATTGTAGGTATCGATGATGAGGATGATGA
TGAATTGGAAGAAGAGGAACTAGATGAAGATGCTGATGGTGGATTGGAAG
AAATTGTTGATGGTGGTGAGGATGAAAATGAAGAGGATGATGAGGACGAT
GATGATGACGAAGAAGAAGTTGTCATCACTGCTGAAAATGATGGATTGAT
TGACAGagaagaagaagaggaagacgatgatgatgatgacgacGACGATG
AATTAGAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGATTACCTCACT
AAAGAAAACCTCTCTGAGGAAGACGAAGACGAGGAAGATTTCAACCCTGA
AGAAGTCgacgatgaagaagaagaactctctgaagaagaagaagagattA
TGGAAGAACAGAGAGGTGTCAAACGAAAACATGAAGGCGACCATTCACGT
GCAGATGAGGAGTCATAACATTGTCAATACATCATCAACACACAACAATT
TAACTGCCGTGGGAAGAATCTTTTCATTGTTAACACCCTGGAGGTGTGGT
ATGGTTTATTGATGGCGAAAAGTGAGAAAGAATTAAACGGGTGAAGGATG
ATCTGCCGGTCAGACGCATTCTTTTGAAGTAGGCTGAAACACACGGCAAT
ATTTTATTATAGATAGAACTCCTGTGTTTTCTGGAATCCGAGAGTGATTC
TTGGACACGCTACTTGACAGAGACTTGCTTGATAAAAAGACCCTCAATGA
CTTACGATGTTTTATTTTCCTCGTTTACAATGATGCCCAATTATTCCTGG
AATTTAATAAATATCACAGTTTTATTCACCAAACATCACCATTACAGCAT
TTGCTAATCTTAaggttttttatttatattttatttatgactgggttttt
tttttcacgtgCTCTTTAAAACCGTTttccctttgttttgaaatatgacT
ATCTGATAGGTCAGGGTTGACTAAGCTAGCACCTAGAAAAGAATGATATT
GATTATACAAAGTCTCCCCTAGTTAAATACGGGGCTTGAAACTAAATTCA
CATTGGGACCGCAAGAAAAAAGATTCGGATCATATCGATATTTGCCATTT
AAAGATCTAATagaaaatgatgaaatcaaaCCTGATGAGCCAAACACCTG
TAACACAATAGGAAATTTTCAGAGGCCAGAAAGTAATGAAGTAAAAATGA
TTAATCCtaagtattttttatcaatagtATATTATTACGTTTAAAAGTAA
GGAATGGAAAGGCAAGTGGTAAAAGAAATTTATCTTGTTTGTTATttgaa
aacataaaatatttttacgttGAACTGTTCGAATAGACCAAAAAAAGTTC
TATCCCTGTATATATTGTATAATGTTTGTATAATTTGTTATGGCtaattt
ttaggcaaaaagaaaAGTTATACGAACAGTAAAT
Run BLAST on NCBI

protein sequence of TCONS_00001627-protein

>TCONS_00001627-protein ID=TCONS_00001627-protein|Name=TCONS_00001627-protein|organism=Clytia hemisphaerica|type=polypeptide|length=355bp
VGMKIKVAISFTGKFEMENRIELERRGQEKKEITELNLDNTRSTSIVGLT
DEYSNLEYLSLINVGLTTLKGLPGLEKLKKLELSDNRISTGLDYLLKLPG
LAYLSLSGNRIKDFESLSPLAKLSNLKSLDLFNCEVTCEKDYRAKVFELI
PQLKFLDGADRDDKEMEESESEGEEDEEDDDDEEGEDEDGVENGVTEDDD
DEDEDTEIVGIDDEDDDELEEEELDEDADGGLEEIVDGGEDENEEDDEDD
DDDEEEVVITAENDGLIDREEEEEDDDDDDDDDELEESDEDEELGLDYLT
KENLSEEDEDEEDFNPEEVDDEEEELSEEEEEIMEEQRGVKRKHEGDHSR
ADEES
Run BLAST on NCBI

transcript from alignment at sc0000011:1055167..1062634+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001627 ID=TCONS_00001627|Name=TCONS_00001627|organism=Clytia hemisphaerica|type=transcript|length=7468bp|location=Sequence derived from alignment at sc0000011:1055167..1062634+ (Clytia hemisphaerica)
GTAGGAATGAAAATCAAGGTAGGAGAACGACTCAAAGGCCCAAATTGTTT CTGTAATTAGTTCGAAATTTctacttttccaaaatttagAAATCTCGGTG GTGCGGATAAAAACATTGAAGTCTGTATATTTTGCATAATTAACATAATT TGatatttactatttttgatTGGATAGAATATTTGTTTATATGCATatat tatgataaattattcgaAAACTTGTTTGCTCATTGGTTCATACTAATCAC GTGCTGTTTAGATCTTtgcataattatttcaaaagcTTGCCTTTTCAATC TTCAGCCCGCCGTAAATACTCACCAAGCTGGCCTATCATTCTTAGAACCA GTTTTGTGACTAAAGTCCAGTTATAAGCTGGTTTTTAGTCTGTTAGCTAA CTTGCCGAAACGTCGACATTTCGTCTCGCGAGATCGAAATCAAAATATAC CTTGTGGAATTTTATTGAGGTACTCTGAGCTTGTAGTTAAATTTGTGGAG AAATCTTGGGTTTTAGGTAGCGATTTCTTTTACTGGCAAATTTGAAATGG AAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAAAAGAGGTATGT TCTTCTATCTTTCTTGACACAGTTCCTATCAATTGTACTTTTTGATATAA AGATAAActttaaatatgatttttagcAGGTTGTTGtattatttgtttat gtttacaGATTACTGAACTCAACCTTGATAATACCAGATCCACTTCAATT GTTGGATTGACAGATGAATACTcaaatttggaatatctttcaTTGATCAA TGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaa aagtaagCACTGTCTGTGTAATTTTTCgtaaattaattttgaataatCAG TTGTCAATTTTATGTATTANGTAATTTTCGTAATTAATTTTGAATAGTCA GTTGTCATTTTTATGTATTACTTTcagatactttaatgggataaaatttc agGGACTCTGTGTGGATTTAGGTATCATCCTGACCTaactttgttgtcat ttctCTAGTCCTTCTAGACgagtgagaaaaaaaatgttttcacattacac atccctttagagttTTAGCGTTGCatgcagaaaacaatcacaatctgatc tcaggttttAGCTTGACCACACAATGTTTATTCCCTTCAAAATTTTAGTC CATTAAAGTTTAACCTTCTATCTTTGTGATATATTTTTTGCTGAACACAG GAGGCAAAAAGAGCTAGAAAGGCAGGACAGTGTCTGCTGCTCTAGATAGG CTGAAAAGAGCACTTTTTCTGTTGCTTTTTCATGTCTGATCACATAAGgc taaaaatgccttaaaatggtCTGAAATGACtaaatgtatttttgttttAC CCAAGTTCTAATGGATTTCTTTTACTTTTGTTGGAGTTCAATTCGGGAGT AGGGTTTTCAATATACAATAACTGGGCATATCACCAAACTAAATTTTAGc tgggacaaaaatcagttctTAGAGGGATATTTGTATCCTTACTAGGTTTG GTTTTGTTTGCAAAACTGCCCAATAATGTGAATGTTAAGAAGGGACACAT ACTTCTTTCCCCACACAAACCACCTACTGTGAGaccgggtaacttgcatc agtggaggctaacatgcttagccctcaaatgaatggcctggctggtcatt aatatacaaagttaaatcaaaacaaaaatggtagaacagagctgcgtagt tcatttttttgaaattttgctgttttaattggtcagtcatttCAGGGTTC GAATTAACGTATCGCGTTTCGCCATTCGCGATGCGTTTTTGGAAATgtag gaagcaaaaattcagaaatttaaCAAAATCGCGATACAACATATGAAGAA TTTTACAGCTCACTAAAGTACAATGGTTAAATTGGTCTTTAGAGTGGAGA ATGCATCGTATATTGATAAAAACGCATAATTAGCTCACTCCGTTCGCACA AAAGTGCGATGCACTTTTAAATAGTTAATTCGATCCATGCATTTAATAGC TATACAAGTTTCCCTCtgctgatgcaagttacccaacttcacggtacCAT AAATGTCACATCTTGCAAAATAAAcgttttatagcaaaatttgaGACACT ATTCATGCTTTGATATAAATTTCAGTTGCTAGATATAACATAGAGAAACA AGGAAAAGTTTAACTTTCTTTGCAAGCACTATTACTGAGTTACATCAGCT ctagacaggagaaccgtccTGTATTCTTGTAAaggaataacaaaatttga ttggccaTGTTTTCAACTgtcattaggatctgggaaataataataataaa taataccGGGtaacccacgaaaaagttcagacgcttcccgacgtcttgag gccgaaaaaatgtcccaaagtgcttggagttttgatatttagaaagtaga tatcctaacttaaaatttgggccatcactttttaaatttgactaacttgt tctctacttatgagcatttaaagtcaaaattcacttttcgaaaagtgtaa aaaacacgtaaaaaagaggtattaaattcacgcaatcaattagaaaatca cttacaattgacttatttaacgagttttatgacattaataataataaaaa cacctttgaaagtagtttttgtttaaaacaagactagtttttaaaaaaaa ttggcgctttcatagatttttttcaaaaactgtatataaaaaacgtctaa aaatatcaaatttaataccccttttttacgtattttttacactttccgta aagtgaattttgactttaaaagagaacaagttggtcaaatttaaaaagtg atagctcaaattttaatttaggatatctactttctaaatatcaaaactcc aagcactttgggacatttgttcggcctcaagacgtcgggaaacgtctgaa ctttttcgtgggtcacccggtagaataagaaatcatagcatggatctcca ggctaacaTCAGCTCTTGAAGTGATTCAtcatttttctctgattttaaat ttaatgttttgttgATCTAAAAACCAGGTGtataggtccataaaagtatc attttttgtcttttttagctTGAGCTGAGTGACAATAGGATATCAACAGG ATTGGATTATTTACTAAAATTACCTGGTTTAGCTTACCTCAGTCTCAGTG GAAACAGaatcaaagactttgaaagcCTTTCTCCATTGGTAAGCTGAAAC TATATTATTCCaattaatttgttttttggAAAACTTAAACAAAACACtca agaaaattttgtttgcaatgttaATTTTGTGGTGCACACTGTATAAAACA tataacaaatattttttactgACTTGTTTCTTCATGTAGGCAAATATTAT AGTCACTACAAataatttattatatttttttcttaatagGCTAAACTTAG TAACTTGAAGAGTTTGGATTTGTTTAACTGCGAAGTCACTTGTGAAAAGG ATTATCGGGCCAAAGTATTTGAGCTCATCCCGCAGCTGAAATTTCTTGAT GGGGCTGACAGGTAACTTTTATGCTTATACCAGGATCACTGTAAATAACT ATTAATGAAATATAGTATTGTTGTATACCTGTTAGCCTTTTTAATCTACA TTAATTATTGATGTTACTGTGTTGTATCACATCAGTTATTTCACAATTCA AGGTATTGTTACCCGTTGGAATGCAATGTCTTATGAAGGggatttttttg atttggtttgatcTGGTTTGATAATGAAAACAAGGTCCATGTGGCATTTC TAATTGCCCTGCATTTAGAATACTTGCAGATTATTTTGGgtaataataaa acatatattgcATGTCTTCTTTTCAGTAAACTCACCTTGAGGTAATAAAA TCAGAATATCTGATGAAAGGctaatcaatctgaatcaatatcTGCTTTAT TGAATTGTATCAAATCAATGAAATATaatcaaaatgaattttaattttta ttattctttTTGTTCAGAGACGACAAAGAAATGGAAGAGTCTGAGTCagg taattatttttctgattttaataataatattgaattttgagtttctgtca aaataatttaccagCAGCTCGCGTTTGTCAAGTCGCATTGTCTGTCAACg atgtgattcctactccttcatgggtaggacccattcggGAGGGCTTATAT CTATTTACCAAAACAAGATTAATACTAAACACCTCCCTCTAAAATCAACC AGTGAATGTGAAATTTAtttgagaattttactgaaAAGTGAcggtgaaaa caaaaattttgataaatttcctTCAAACACTTAGCAATGGTTGCCTCCCT TGATTATATTACTCTTACAGTAAATTGGACACAAAAGATTAATTTCCAAT TTTCACAGACTTTTATgattttaattgaaattttcaccaattttacAGAA GGAGAAGAGGACGAAGAAGATGATGACGATGAAGAAGGCGAAGATGAAGG TATTATTTTTCACTTTGCATTTTCTGTTTATTTGAGGATGTTCGACCTTT AAAGGGCATAGAAATTTTGCAAGGGACCACTCACATATCTATTTTCCCCA TTGCTTACGTGAAAATGACGCAAAAGACCCTCCCACCCcttgaaatttaa tccccgcgaaagtttatcccattaaaaagtattcttaagaaattaaaaaa acaacagttttttctgttaaccaaataaaaaatgactgtattcttatcca AAATTTGTGAAACTCATCCTAGTGAGTATTCTAATATTCTTACGAATTGA CCAagtttcaccctgatattcttatagaaggtatgcttataaaattaAAT GCGTGTAAGTAattatcaaatttcaatttttcaaagtataaGGTTTATGT CTCAAGGAGAATCTAGGCTAAATTGCTGTGTTTTAAATCCATTAACTGTC TCATCAAGACAAAAGACCATTTCCATTTATTTAGACGGTGTAGAGAATGG TGTAACAGAAGATGACGATGACGAGGATGAAGATACTGAAATTGTAGGTA TCGATGATGAGGATGATGATGAATTGGAAGAAGAGGAACTAGATGAAGAT GCTGATGGTGGATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAATGA AGAGGATGATGAGGACGATGATGATGACGAAGAAGAAGTTGTCATCACTG CTGAAAATGATGGTTTATTTCTACTACATTTTTTCTACATGCCTTTTTAT TAGTATAGCATAAGCATATGCAGGTTCAAACCTTGAAAAAACAGATTTTG GCCAAGTCGGCCAAATTAagctttcaccaaaatttctaTCCTTAAGGTAG TCTGTTTCAATGACACATCTACAGCAGGATTTTTTTATTGAGAGGCTTTT TAGCTAATAACCTTTGTTAGGTCAGTAGCTAAGAAGCATTAAATAACCAA TTCTCTACAAGCTCTTCGAGTACTACGTTAAAATTCGCGGATGCTTGGTG GATTGTTTTGTTCTAATTGTCAACTTAAGAGCAAGAACCAACAATGTCAA TGACACAATTTGCTTTCTACCCCGCCTTCCTTGTTAGAAGTCAGTTAAAA GTCAGCCGAGTATGCTGCACATCTACTGTGTAAAATCAATGTAGCTCTTG ACGTCAATGAAGTATCTTTTCTAagcaaatatttgaaagtttaaaaaagt gcACCGTCCAAGTTAAGTCTTTGATTCAGTCAAATAAATATATTAGTAGC AACATGTTTTCTACTCCAATTGATCAGGATTGATTGACAGagaagaagaa gaggaagacgatgatgatgatgacgacGACGATGAATTAGAAGAAAGTGA CGAAGACGAAGAACTTGGTTTGGATTACCTCACTAAAGAAAACCTCTCTG TAAGTACAATTCAAGGGGTTTAAGATTATTCTTCTAGGTATAACGTTTTA GTATTACAGAGAGACCTTTTATAAATTAGATAACGTCAACAAAGAAAACC TTTCTGCAAGGACAATCCGAGCGAGTCTTTATCGAATTAGATATGgtgaa attttgagatggaaTTATATCAACTAAGAACAGTCCGTCCAATGGGTCAA GAAGCCTCCTTCGAAAGAGCTATTAGCTGAGTAGCTTCATCCCTGTGAAA GTTTAACTACAATCCAATTGATTGTTTCCAAAAAACGTTTTGACCAATAT TTTAATTTTCCCTTTCGGATCATTCAATGTCTGTAGTCATGAATAAATGT TCGAAATGGGTATCAATGGTCTGCAATATGTAGGTAATTACCCTTCTCAA GATTCGTTCTTACCAATATTTTAACTATTTAATTAATTATAATTGTTAGG AGGAAGACGAAGACGAGGAAGATTTCAACCCTGAAGAAGTCgacgatgaa gaagaagaactctctgaagaagaagaagagattATGGAAGAACAGAGAGG TGTCAAACGAAAACATGAAGGCGACCATTCACGTGCAGATGAGGAGTCAT AACATTGTCAATACATCATCAACACACAACAATTTAACTGCCGTGGGAAG AATCTTTTCATTGTTAACACCCTGGAGGTGTGGTATGGTTTATTGATGGC GAAAAGTGAGAAAGAATTAAACGGGTGAAGGATGATCTGCCGGTCAGACG CATTCTTTTGAAGTAGGCTGAAACACACGGCAATATTTTATTATAGATAG AACTCCTGTGTTTTCTGGAATCCGAGAGTGATTCTTGGACACGCTACTTG ACAGAGACTTGCTTGATAAAAAGACCCTCAATGACTTACGATGTTTTATT TTCCTCGTTTACAATGATGCCCAATTATTCCTGGAATTTAATAAATATCA CAGTTTTATTCACCAAACATCACCATTACAGCATTTGCTAATCTTAaggt tttttatttatattttatttatgactgggttttttttttcacgtgCTCTT TAAAACCGTTttccctttgttttgaaatatgacTATCTGATAGGTCAGGG TTGACTAAGCTAGCACCTAGAAAAGAATGATATTGATTATACAAAGTCTC CCCTAGTTAAATACGGGGCTTGAAACTAAATTCACATTGGGACCGCAAGA AAAAAGATTCGGATCATATCGATATTTGCCATTTAAAGATCTAATagaaa atgatgaaatcaaaCCTGATGAGCCAAACACCTGTAACACAATAGGAAAT TTTCAGAGGCCAGAAAGTAATGAAGTAAAAATGATTAATCCtaagtattt tttatcaatagtATATTATTACGTTTAAAAGTAAGGAATGGAAAGGCAAG TGGTAAAAGAAATTTATCTTGTTTGTTATttgaaaacataaaatattttt acgttGAACTGTTCGAATAGACCAAAAAAAGTTCTATCCCTGTATATATT GTATAATGTTTGTATAATTTGTTATGGCtaatttttaggcaaaaagaaaA GTTATACGAACAGTAAAT

Coding sequence (CDS) from alignment at sc0000011:1055167..1062634+

>TCONS_00001627 ID=TCONS_00001627|Name=TCONS_00001627|organism=Clytia hemisphaerica|type=CDS|length=10680bp|location=Sequence derived from alignment at sc0000011:1055167..1062634+ (Clytia hemisphaerica)
GTAGGAATGAAAATCAAGGTAGCGATTTCTTTTACTGGCAAATTTGAAAT
GGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAAAAGAGATTA
CTGAACTCAACCTTGATAATACCAGATCCACTTCAATTGTTGGATTGACA
GATGAATACTcaaatttggaatatctttcaTTGATCAATGTTGGGTTAAC
AACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaaaactTGAGCTGA
GTGACAATAGGATATCAACAGGATTGGATTATTTACTAAAATTACCTGGT
TTAGCTTACCTCAGTCTCAGTGGAAACAGaatcaaagactttgaaagcCT
TTCTCCATTGGCTAAACTTAGTAACTTGAAGAGTTTGGATTTGTTTAACT
GCGAAGTCACTTGTGAAAAGGATTATCGGGCCAAAGTATTTGAGCTCATC
CCGCAGCTGAAATTTCTTGATGGGGCTGACAGAGACGACAAAGAAATGGA
AGAGTCTGAGTCagAAGGAGAAGAGGACGAAGAAGATGATGACGATGAAG
AAGGCGAAGATGAAGACGGTGTAGAGAATGGTGTAACAGAAGATGACGAT
GACGAGGATGAAGATACTGAAATTGTAGGTATCGATGATGAGGATGATGA
TGAATTGGAAGAAGAGGAACTAGATGAAGATGCTGATGGTGGATTGGAAG
AAATTGTTGATGGTGGTGAGGATGAAAATGAAGAGGATGATGAGGACGAT
GATGATGACGAAGAAGAAGTTGTCATCACTGCTGAAAATGATGGATTGAT
TGACAGagaagaagaagaggaagacgatgatgatgatgacgacGACGATG
AATTAGAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGATTACCTCACT
AAAGAAAACCTCTCTGAGGAAGACGAAGACGAGGAAGATTTCAACCCTGA
AGAAGTCgacgatgaagaagaagaactctctgaagaagaagaagagattA
TGGAAGAACAGAGAGGTGTCAAACGAAAACATGAAGGCGACCATTCACGT
GCAGATGAGGAGTCATAAGTAGGAATGAAAATCAAGGTAGCGATTTCTTT
TACTGGCAAATTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGC
AAGAGAAAAAAGAGATTACTGAACTCAACCTTGATAATACCAGATCCACT
TCAATTGTTGGATTGACAGATGAATACTcaaatttggaatatctttcaTT
GATCAATGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACttgagaaat
taaaaaaactTGAGCTGAGTGACAATAGGATATCAACAGGATTGGATTAT
TTACTAAAATTACCTGGTTTAGCTTACCTCAGTCTCAGTGGAAACAGaat
caaagactttgaaagcCTTTCTCCATTGGCTAAACTTAGTAACTTGAAGA
GTTTGGATTTGTTTAACTGCGAAGTCACTTGTGAAAAGGATTATCGGGCC
AAAGTATTTGAGCTCATCCCGCAGCTGAAATTTCTTGATGGGGCTGACAG
AGACGACAAAGAAATGGAAGAGTCTGAGTCagAAGGAGAAGAGGACGAAG
AAGATGATGACGATGAAGAAGGCGAAGATGAAGACGGTGTAGAGAATGGT
GTAACAGAAGATGACGATGACGAGGATGAAGATACTGAAATTGTAGGTAT
CGATGATGAGGATGATGATGAATTGGAAGAAGAGGAACTAGATGAAGATG
CTGATGGTGGATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAATGAA
GAGGATGATGAGGACGATGATGATGACGAAGAAGAAGTTGTCATCACTGC
TGAAAATGATGGATTGATTGACAGagaagaagaagaggaagacgatgatg
atgatgacgacGACGATGAATTAGAAGAAAGTGACGAAGACGAAGAACTT
GGTTTGGATTACCTCACTAAAGAAAACCTCTCTGAGGAAGACGAAGACGA
GGAAGATTTCAACCCTGAAGAAGTCgacgatgaagaagaagaactctctg
aagaagaagaagagattATGGAAGAACAGAGAGGTGTCAAACGAAAACAT
GAAGGCGACCATTCACGTGCAGATGAGGAGTCATAAGTAGGAATGAAAAT
CAAGGTAGCGATTTCTTTTACTGGCAAATTTGAAATGGAAAATCGAATTG
AACTTGAGAGGAGGGGGCAAGAGAAAAAAGAGATTACTGAACTCAACCTT
GATAATACCAGATCCACTTCAATTGTTGGATTGACAGATGAATACTcaaa
tttggaatatctttcaTTGATCAATGTTGGGTTAACAACCCTAAAAGGCT
TGCCAGGACttgagaaattaaaaaaactTGAGCTGAGTGACAATAGGATA
TCAACAGGATTGGATTATTTACTAAAATTACCTGGTTTAGCTTACCTCAG
TCTCAGTGGAAACAGaatcaaagactttgaaagcCTTTCTCCATTGGCTA
AACTTAGTAACTTGAAGAGTTTGGATTTGTTTAACTGCGAAGTCACTTGT
GAAAAGGATTATCGGGCCAAAGTATTTGAGCTCATCCCGCAGCTGAAATT
TCTTGATGGGGCTGACAGAGACGACAAAGAAATGGAAGAGTCTGAGTCag
AAGGAGAAGAGGACGAAGAAGATGATGACGATGAAGAAGGCGAAGATGAA
GACGGTGTAGAGAATGGTGTAACAGAAGATGACGATGACGAGGATGAAGA
TACTGAAATTGTAGGTATCGATGATGAGGATGATGATGAATTGGAAGAAG
AGGAACTAGATGAAGATGCTGATGGTGGATTGGAAGAAATTGTTGATGGT
GGTGAGGATGAAAATGAAGAGGATGATGAGGACGATGATGATGACGAAGA
AGAAGTTGTCATCACTGCTGAAAATGATGGATTGATTGACAGagaagaag
aagaggaagacgatgatgatgatgacgacGACGATGAATTAGAAGAAAGT
GACGAAGACGAAGAACTTGGTTTGGATTACCTCACTAAAGAAAACCTCTC
TGAGGAAGACGAAGACGAGGAAGATTTCAACCCTGAAGAAGTCgacgatg
aagaagaagaactctctgaagaagaagaagagattATGGAAGAACAGAGA
GGTGTCAAACGAAAACATGAAGGCGACCATTCACGTGCAGATGAGGAGTC
ATAAGTAGGAATGAAAATCAAGGTAGCGATTTCTTTTACTGGCAAATTTG
AAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAAAAGAG
ATTACTGAACTCAACCTTGATAATACCAGATCCACTTCAATTGTTGGATT
GACAGATGAATACTcaaatttggaatatctttcaTTGATCAATGTTGGGT
TAACAACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaaaactTGAG
CTGAGTGACAATAGGATATCAACAGGATTGGATTATTTACTAAAATTACC
TGGTTTAGCTTACCTCAGTCTCAGTGGAAACAGaatcaaagactttgaaa
gcCTTTCTCCATTGGCTAAACTTAGTAACTTGAAGAGTTTGGATTTGTTT
AACTGCGAAGTCACTTGTGAAAAGGATTATCGGGCCAAAGTATTTGAGCT
CATCCCGCAGCTGAAATTTCTTGATGGGGCTGACAGAGACGACAAAGAAA
TGGAAGAGTCTGAGTCagAAGGAGAAGAGGACGAAGAAGATGATGACGAT
GAAGAAGGCGAAGATGAAGACGGTGTAGAGAATGGTGTAACAGAAGATGA
CGATGACGAGGATGAAGATACTGAAATTGTAGGTATCGATGATGAGGATG
ATGATGAATTGGAAGAAGAGGAACTAGATGAAGATGCTGATGGTGGATTG
GAAGAAATTGTTGATGGTGGTGAGGATGAAAATGAAGAGGATGATGAGGA
CGATGATGATGACGAAGAAGAAGTTGTCATCACTGCTGAAAATGATGGAT
TGATTGACAGagaagaagaagaggaagacgatgatgatgatgacgacGAC
GATGAATTAGAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGATTACCT
CACTAAAGAAAACCTCTCTGAGGAAGACGAAGACGAGGAAGATTTCAACC
CTGAAGAAGTCgacgatgaagaagaagaactctctgaagaagaagaagag
attATGGAAGAACAGAGAGGTGTCAAACGAAAACATGAAGGCGACCATTC
ACGTGCAGATGAGGAGTCATAAGTAGGAATGAAAATCAAGGTAGCGATTT
CTTTTACTGGCAAATTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGG
GGGCAAGAGAAAAAAGAGATTACTGAACTCAACCTTGATAATACCAGATC
CACTTCAATTGTTGGATTGACAGATGAATACTcaaatttggaatatcttt
caTTGATCAATGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACttgag
aaattaaaaaaactTGAGCTGAGTGACAATAGGATATCAACAGGATTGGA
TTATTTACTAAAATTACCTGGTTTAGCTTACCTCAGTCTCAGTGGAAACA
GaatcaaagactttgaaagcCTTTCTCCATTGGCTAAACTTAGTAACTTG
AAGAGTTTGGATTTGTTTAACTGCGAAGTCACTTGTGAAAAGGATTATCG
GGCCAAAGTATTTGAGCTCATCCCGCAGCTGAAATTTCTTGATGGGGCTG
ACAGAGACGACAAAGAAATGGAAGAGTCTGAGTCagAAGGAGAAGAGGAC
GAAGAAGATGATGACGATGAAGAAGGCGAAGATGAAGACGGTGTAGAGAA
TGGTGTAACAGAAGATGACGATGACGAGGATGAAGATACTGAAATTGTAG
GTATCGATGATGAGGATGATGATGAATTGGAAGAAGAGGAACTAGATGAA
GATGCTGATGGTGGATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAA
TGAAGAGGATGATGAGGACGATGATGATGACGAAGAAGAAGTTGTCATCA
CTGCTGAAAATGATGGATTGATTGACAGagaagaagaagaggaagacgat
gatgatgatgacgacGACGATGAATTAGAAGAAAGTGACGAAGACGAAGA
ACTTGGTTTGGATTACCTCACTAAAGAAAACCTCTCTGAGGAAGACGAAG
ACGAGGAAGATTTCAACCCTGAAGAAGTCgacgatgaagaagaagaactc
tctgaagaagaagaagagattATGGAAGAACAGAGAGGTGTCAAACGAAA
ACATGAAGGCGACCATTCACGTGCAGATGAGGAGTCATAAGTAGGAATGA
AAATCAAGGTAGCGATTTCTTTTACTGGCAAATTTGAAATGGAAAATCGA
ATTGAACTTGAGAGGAGGGGGCAAGAGAAAAAAGAGATTACTGAACTCAA
CCTTGATAATACCAGATCCACTTCAATTGTTGGATTGACAGATGAATACT
caaatttggaatatctttcaTTGATCAATGTTGGGTTAACAACCCTAAAA
GGCTTGCCAGGACttgagaaattaaaaaaactTGAGCTGAGTGACAATAG
GATATCAACAGGATTGGATTATTTACTAAAATTACCTGGTTTAGCTTACC
TCAGTCTCAGTGGAAACAGaatcaaagactttgaaagcCTTTCTCCATTG
GCTAAACTTAGTAACTTGAAGAGTTTGGATTTGTTTAACTGCGAAGTCAC
TTGTGAAAAGGATTATCGGGCCAAAGTATTTGAGCTCATCCCGCAGCTGA
AATTTCTTGATGGGGCTGACAGAGACGACAAAGAAATGGAAGAGTCTGAG
TCagAAGGAGAAGAGGACGAAGAAGATGATGACGATGAAGAAGGCGAAGA
TGAAGACGGTGTAGAGAATGGTGTAACAGAAGATGACGATGACGAGGATG
AAGATACTGAAATTGTAGGTATCGATGATGAGGATGATGATGAATTGGAA
GAAGAGGAACTAGATGAAGATGCTGATGGTGGATTGGAAGAAATTGTTGA
TGGTGGTGAGGATGAAAATGAAGAGGATGATGAGGACGATGATGATGACG
AAGAAGAAGTTGTCATCACTGCTGAAAATGATGGATTGATTGACAGagaa
gaagaagaggaagacgatgatgatgatgacgacGACGATGAATTAGAAGA
AAGTGACGAAGACGAAGAACTTGGTTTGGATTACCTCACTAAAGAAAACC
TCTCTGAGGAAGACGAAGACGAGGAAGATTTCAACCCTGAAGAAGTCgac
gatgaagaagaagaactctctgaagaagaagaagagattATGGAAGAACA
GAGAGGTGTCAAACGAAAACATGAAGGCGACCATTCACGTGCAGATGAGG
AGTCATAAGTAGGAATGAAAATCAAGGTAGCGATTTCTTTTACTGGCAAA
TTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAAA
AGAGATTACTGAACTCAACCTTGATAATACCAGATCCACTTCAATTGTTG
GATTGACAGATGAATACTcaaatttggaatatctttcaTTGATCAATGTT
GGGTTAACAACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaaaact
TGAGCTGAGTGACAATAGGATATCAACAGGATTGGATTATTTACTAAAAT
TACCTGGTTTAGCTTACCTCAGTCTCAGTGGAAACAGaatcaaagacttt
gaaagcCTTTCTCCATTGGCTAAACTTAGTAACTTGAAGAGTTTGGATTT
GTTTAACTGCGAAGTCACTTGTGAAAAGGATTATCGGGCCAAAGTATTTG
AGCTCATCCCGCAGCTGAAATTTCTTGATGGGGCTGACAGAGACGACAAA
GAAATGGAAGAGTCTGAGTCagAAGGAGAAGAGGACGAAGAAGATGATGA
CGATGAAGAAGGCGAAGATGAAGACGGTGTAGAGAATGGTGTAACAGAAG
ATGACGATGACGAGGATGAAGATACTGAAATTGTAGGTATCGATGATGAG
GATGATGATGAATTGGAAGAAGAGGAACTAGATGAAGATGCTGATGGTGG
ATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAATGAAGAGGATGATG
AGGACGATGATGATGACGAAGAAGAAGTTGTCATCACTGCTGAAAATGAT
GGATTGATTGACAGagaagaagaagaggaagacgatgatgatgatgacga
cGACGATGAATTAGAAGAAAGTGACGAAGACGAAGAACTTGGTTTGGATT
ACCTCACTAAAGAAAACCTCTCTGAGGAAGACGAAGACGAGGAAGATTTC
AACCCTGAAGAAGTCgacgatgaagaagaagaactctctgaagaagaaga
agagattATGGAAGAACAGAGAGGTGTCAAACGAAAACATGAAGGCGACC
ATTCACGTGCAGATGAGGAGTCATAAGTAGGAATGAAAATCAAGGTAGCG
ATTTCTTTTACTGGCAAATTTGAAATGGAAAATCGAATTGAACTTGAGAG
GAGGGGGCAAGAGAAAAAAGAGATTACTGAACTCAACCTTGATAATACCA
GATCCACTTCAATTGTTGGATTGACAGATGAATACTcaaatttggaatat
ctttcaTTGATCAATGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACt
tgagaaattaaaaaaactTGAGCTGAGTGACAATAGGATATCAACAGGAT
TGGATTATTTACTAAAATTACCTGGTTTAGCTTACCTCAGTCTCAGTGGA
AACAGaatcaaagactttgaaagcCTTTCTCCATTGGCTAAACTTAGTAA
CTTGAAGAGTTTGGATTTGTTTAACTGCGAAGTCACTTGTGAAAAGGATT
ATCGGGCCAAAGTATTTGAGCTCATCCCGCAGCTGAAATTTCTTGATGGG
GCTGACAGAGACGACAAAGAAATGGAAGAGTCTGAGTCagAAGGAGAAGA
GGACGAAGAAGATGATGACGATGAAGAAGGCGAAGATGAAGACGGTGTAG
AGAATGGTGTAACAGAAGATGACGATGACGAGGATGAAGATACTGAAATT
GTAGGTATCGATGATGAGGATGATGATGAATTGGAAGAAGAGGAACTAGA
TGAAGATGCTGATGGTGGATTGGAAGAAATTGTTGATGGTGGTGAGGATG
AAAATGAAGAGGATGATGAGGACGATGATGATGACGAAGAAGAAGTTGTC
ATCACTGCTGAAAATGATGGATTGATTGACAGagaagaagaagaggaaga
cgatgatgatgatgacgacGACGATGAATTAGAAGAAAGTGACGAAGACG
AAGAACTTGGTTTGGATTACCTCACTAAAGAAAACCTCTCTGAGGAAGAC
GAAGACGAGGAAGATTTCAACCCTGAAGAAGTCgacgatgaagaagaaga
actctctgaagaagaagaagagattATGGAAGAACAGAGAGGTGTCAAAC
GAAAACATGAAGGCGACCATTCACGTGCAGATGAGGAGTCATAAGTAGGA
ATGAAAATCAAGGTAGCGATTTCTTTTACTGGCAAATTTGAAATGGAAAA
TCGAATTGAACTTGAGAGGAGGGGGCAAGAGAAAAAAGAGATTACTGAAC
TCAACCTTGATAATACCAGATCCACTTCAATTGTTGGATTGACAGATGAA
TACTcaaatttggaatatctttcaTTGATCAATGTTGGGTTAACAACCCT
AAAAGGCTTGCCAGGACttgagaaattaaaaaaactTGAGCTGAGTGACA
ATAGGATATCAACAGGATTGGATTATTTACTAAAATTACCTGGTTTAGCT
TACCTCAGTCTCAGTGGAAACAGaatcaaagactttgaaagcCTTTCTCC
ATTGGCTAAACTTAGTAACTTGAAGAGTTTGGATTTGTTTAACTGCGAAG
TCACTTGTGAAAAGGATTATCGGGCCAAAGTATTTGAGCTCATCCCGCAG
CTGAAATTTCTTGATGGGGCTGACAGAGACGACAAAGAAATGGAAGAGTC
TGAGTCagAAGGAGAAGAGGACGAAGAAGATGATGACGATGAAGAAGGCG
AAGATGAAGACGGTGTAGAGAATGGTGTAACAGAAGATGACGATGACGAG
GATGAAGATACTGAAATTGTAGGTATCGATGATGAGGATGATGATGAATT
GGAAGAAGAGGAACTAGATGAAGATGCTGATGGTGGATTGGAAGAAATTG
TTGATGGTGGTGAGGATGAAAATGAAGAGGATGATGAGGACGATGATGAT
GACGAAGAAGAAGTTGTCATCACTGCTGAAAATGATGGATTGATTGACAG
agaagaagaagaggaagacgatgatgatgatgacgacGACGATGAATTAG
AAGAAAGTGACGAAGACGAAGAACTTGGTTTGGATTACCTCACTAAAGAA
AACCTCTCTGAGGAAGACGAAGACGAGGAAGATTTCAACCCTGAAGAAGT
CgacgatgaagaagaagaactctctgaagaagaagaagagattATGGAAG
AACAGAGAGGTGTCAAACGAAAACATGAAGGCGACCATTCACGTGCAGAT
GAGGAGTCATAAGTAGGAATGAAAATCAAGGTAGCGATTTCTTTTACTGG
CAAATTTGAAATGGAAAATCGAATTGAACTTGAGAGGAGGGGGCAAGAGA
AAAAAGAGATTACTGAACTCAACCTTGATAATACCAGATCCACTTCAATT
GTTGGATTGACAGATGAATACTcaaatttggaatatctttcaTTGATCAA
TGTTGGGTTAACAACCCTAAAAGGCTTGCCAGGACttgagaaattaaaaa
aactTGAGCTGAGTGACAATAGGATATCAACAGGATTGGATTATTTACTA
AAATTACCTGGTTTAGCTTACCTCAGTCTCAGTGGAAACAGaatcaaaga
ctttgaaagcCTTTCTCCATTGGCTAAACTTAGTAACTTGAAGAGTTTGG
ATTTGTTTAACTGCGAAGTCACTTGTGAAAAGGATTATCGGGCCAAAGTA
TTTGAGCTCATCCCGCAGCTGAAATTTCTTGATGGGGCTGACAGAGACGA
CAAAGAAATGGAAGAGTCTGAGTCagAAGGAGAAGAGGACGAAGAAGATG
ATGACGATGAAGAAGGCGAAGATGAAGACGGTGTAGAGAATGGTGTAACA
GAAGATGACGATGACGAGGATGAAGATACTGAAATTGTAGGTATCGATGA
TGAGGATGATGATGAATTGGAAGAAGAGGAACTAGATGAAGATGCTGATG
GTGGATTGGAAGAAATTGTTGATGGTGGTGAGGATGAAAATGAAGAGGAT
GATGAGGACGATGATGATGACGAAGAAGAAGTTGTCATCACTGCTGAAAA
TGATGGATTGATTGACAGagaagaagaagaggaagacgatgatgatgatg
acgacGACGATGAATTAGAAGAAAGTGACGAAGACGAAGAACTTGGTTTG
GATTACCTCACTAAAGAAAACCTCTCTGAGGAAGACGAAGACGAGGAAGA
TTTCAACCCTGAAGAAGTCgacgatgaagaagaagaactctctgaagaag
aagaagagattATGGAAGAACAGAGAGGTGTCAAACGAAAACATGAAGGC
GACCATTCACGTGCAGATGAGGAGTCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000846XLOC_000846Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001627-proteinTCONS_00001627-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001627-exon-sc0000011-1491911889:1055167..1055184TCONS_00001627-exon-sc0000011-1491911889:1055167..1055184Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1055167..1055184TCONS_00001627-exon-sc0000011-1510915933:1055167..1055184Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1055167..1055184TCONS_00001627-exon-sc0000011-1575043694:1055167..1055184Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1055683..1055760TCONS_00001627-exon-sc0000011-1491911889:1055683..1055760Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1055683..1055760TCONS_00001627-exon-sc0000011-1510915933:1055683..1055760Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1055683..1055760TCONS_00001627-exon-sc0000011-1575043694:1055683..1055760Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1055875..1056018TCONS_00001627-exon-sc0000011-1491911889:1055875..1056018Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1055875..1056018TCONS_00001627-exon-sc0000011-1510915933:1055875..1056018Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1055875..1056018TCONS_00001627-exon-sc0000011-1575043694:1055875..1056018Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1058285..1058404TCONS_00001627-exon-sc0000011-1491911889:1058285..1058404Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1058285..1058404TCONS_00001627-exon-sc0000011-1510915933:1058285..1058404Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1058285..1058404TCONS_00001627-exon-sc0000011-1575043694:1058285..1058404Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1058606..1058727TCONS_00001627-exon-sc0000011-1491911889:1058606..1058727Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1058606..1058727TCONS_00001627-exon-sc0000011-1510915933:1058606..1058727Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1058606..1058727TCONS_00001627-exon-sc0000011-1575043694:1058606..1058727Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1059184..1059215TCONS_00001627-exon-sc0000011-1491911889:1059184..1059215Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1059184..1059215TCONS_00001627-exon-sc0000011-1510915933:1059184..1059215Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1059184..1059215TCONS_00001627-exon-sc0000011-1575043694:1059184..1059215Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1059615..1059665TCONS_00001627-exon-sc0000011-1491911889:1059615..1059665Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1059615..1059665TCONS_00001627-exon-sc0000011-1510915933:1059615..1059665Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1059615..1059665TCONS_00001627-exon-sc0000011-1575043694:1059615..1059665Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1060151..1060378TCONS_00001627-exon-sc0000011-1491911889:1060151..1060378Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1060151..1060378TCONS_00001627-exon-sc0000011-1510915933:1060151..1060378Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1060151..1060378TCONS_00001627-exon-sc0000011-1575043694:1060151..1060378Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1060944..1061065TCONS_00001627-exon-sc0000011-1491911889:1060944..1061065Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1060944..1061065TCONS_00001627-exon-sc0000011-1510915933:1060944..1061065Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1060944..1061065TCONS_00001627-exon-sc0000011-1575043694:1060944..1061065Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1491911889:1061516..1062634TCONS_00001627-exon-sc0000011-1491911889:1061516..1062634Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1510915933:1061516..1062634TCONS_00001627-exon-sc0000011-1510915933:1061516..1062634Clytia hemisphaericaexon
TCONS_00001627-exon-sc0000011-1575043694:1061516..1062634TCONS_00001627-exon-sc0000011-1575043694:1061516..1062634Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:1055167..1062634 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
51.7816 47.2725 153.408 148.539 189.388 130.62 94.4685 100.171 54.1634 50.5649 41.3476 39.0532 28.3708 27.7906 31.0155 38.7221 62.1311 67.7292 21.2654 19.9465 42.6049 37.1155 52.2982 44.4949 63.9139 65.3887 16.3161 10.9777 26.3833 30.0639
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
BLAST of TCONS_00001627 vs. Swiss-Prot (Human)
Match: AN32A (Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Homo sapiens GN=ANP32A PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.886e-33
Identity = 87/147 (59.18%), Postives = 106/147 (72.11%), Query Frame = 1
Query:   43 FEMENRIELERRGQEKKEITELNLDNTRSTS--IVGLTDEYSNLEYLSLINVXXXXXXXXXXXXXXXXXXXSDNRISTGLDYLL-KLPGLAYLSLSGNRIKDFESLSPLAKLSNLKSLDLFNCEVTCEKDYRAKVFELIPQLKFLDG 474
             EM  RI LE R +   ++ EL LDN+RS    + GLTDE+  LE+LS INVGLT++  LP L KLKKLELSDNR+S GL+ L  K P L +L+LSGN+IKD  ++ PL KL NLKSLDLFNCEVT   DYR  VF+L+PQL +LDG
Sbjct:    1 MEMGRRIHLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147          
The following BLAST results are available for this feature:
BLAST of TCONS_00001627 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AN32A1.886e-3359.18Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
back to top