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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00073386-protein ID=TCONS_00073386-protein|Name=TCONS_00073386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
FKSQMTEQSSLEKIATDAIKKVDSNFSLKRKQMDCIDNVVAGKDTLAILP
TAYGKSMIYQLLPSIFRALPNSSKHPIVLVVSPLQNLIPNQIAEAEELGS
YLNIKACSLDKCSDVETLKMNGYNILFGIPEKWLLSSVKDFLTTSFLRKN
VVCVVVDEAHKISWGVPASSSTESVFREAFSRIGEIRSFCSEKVPVLALS
ATIEMDFTEILRGACSLSKYVKYIHSSPDRKNIRLSIVDAGSKSISCFNW
LLNIISQNSENTPKVLIYCRSQKLVSWLFGQFLSKLRLGIYKNREKHYDN
FLVGMFHADTSPHNKEKYLASLTSVDDTLPRVIIATSTIGCGINAKRLKY
VCHFGPAFSLPADWAGRTE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | SMART | SM00487 | ultradead3 | coord: 24..234
e-value: 9.3E-17
score: 71.7 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 36..221
score: 16.966 |
| IPR011545 | DEAD/DEAH box helicase domain | PFAM | PF00270 | DEAD | coord: 31..207
e-value: 3.8E-17
score: 62.5 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 235..364
e-value: 3.0E-13
score: 49.2 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 1..234
e-value: 7.9E-23
score: 80.4 |
| None | No IPR available | CDD | cd00046 | DEXDc | coord: 43..203
e-value: 1.98304E-15
score: 71.2144 |
| IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 249..359
e-value: 2.0E-7
score: 31.3 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 254..369
score: 7.491 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 37..356 |
Blast
The following BLAST results are available for this feature:
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