TCONS_00073386-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00073386-protein
Unique NameTCONS_00073386-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00073386-protein ID=TCONS_00073386-protein|Name=TCONS_00073386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
FKSQMTEQSSLEKIATDAIKKVDSNFSLKRKQMDCIDNVVAGKDTLAILP
TAYGKSMIYQLLPSIFRALPNSSKHPIVLVVSPLQNLIPNQIAEAEELGS
YLNIKACSLDKCSDVETLKMNGYNILFGIPEKWLLSSVKDFLTTSFLRKN
VVCVVVDEAHKISWGVPASSSTESVFREAFSRIGEIRSFCSEKVPVLALS
ATIEMDFTEILRGACSLSKYVKYIHSSPDRKNIRLSIVDAGSKSISCFNW
LLNIISQNSENTPKVLIYCRSQKLVSWLFGQFLSKLRLGIYKNREKHYDN
FLVGMFHADTSPHNKEKYLASLTSVDDTLPRVIIATSTIGCGINAKRLKY
VCHFGPAFSLPADWAGRTE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_045539XLOC_045539Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00073386TCONS_00073386Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 24..234
e-value: 9.3E-17
score: 71.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 36..221
score: 16.966
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 31..207
e-value: 3.8E-17
score: 62.5
NoneNo IPR availableGENE3D3.40.50.300coord: 235..364
e-value: 3.0E-13
score: 49.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..234
e-value: 7.9E-23
score: 80.4
NoneNo IPR availableCDDcd00046DEXDccoord: 43..203
e-value: 1.98304E-15
score: 71.2144
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 249..359
e-value: 2.0E-7
score: 31.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 254..369
score: 7.491
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 37..356

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073386-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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