XLOC_045450 (gene) - C. hemisphaerica

Overview
NameXLOC_045450
Unique NameXLOC_045450
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_89:120537..123740-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045450 ID=XLOC_045450|Name=XLOC_045450|organism=Clytia hemisphaerica|type=gene|length=3204bp|location=Sequence derived from alignment at scaffold_89:120537..123740- (Clytia hemisphaerica)
CACGAAACCTTCAATCTAATCGAATTTTCTACATAATAAATTTCGATGTT ATGTCATTTCATATCAATGAAAAAATTGTAGAAAAAATACAGAAATAATT ATTTAGCCGCTGGTGTCACGCACAATGTCAGAAACAACTAACAATAATAC AAGGTTAGTTTTTAACGTGGGCGGCCAACGCCACGAGGCATTTTTATCAA CACTAAAAGCTATACCTGGAACTCGTTTATCATGGATTGCTGAAAATTTC ATGCTATTGAAACATTCGCCTGCATATGACCCTATCAAAGAAGAATTTTT TTTTGATCGTAGCCCGACGGCATTTGTTCAGATCCTAAACTATTTTCGAA CCGGCGAATTGCATTATCCTACCAACGTCTGTGGACCCTCATTTGCGACG GAGCTCCGGTTCTGGGGCCTTGATGAAGAGCAAATGCAAAGCTGTTGCTG GGAAGGTTTCACTGCAAATAGAGATAAAGACGCAAAGCTGAAAGGTTTTA AAGGGCCACATTTCGAAATGGATTCATTAGCAGCCGACGAAGACAATTTC GAAGCACTAGGAAAGCGTTACGAGATTCGCTATAAACTGTGGAAGTTCTT TGACGATGCATATTCTTCTAAAGCAGCTAAGGTAAATATATTATAACGGG TTTATGTTTGATACCAAGCATTTTGAGTTGCAGGGTTTCAAATCCTTAGA TTTTGTTCCACGAATGAAAAATGTCTTGCGACGGAGCCCCCCCCCACACT ATTCACTTTGAAAATTGTCTTAAAATCCATTCCTATTTTAATGGGTTAAA AGTAACGTAAAACTACGACATATCGGGAAAATAGGTCGAACTCTCAAACA ATTCAACTTTTTACTATATTACTTGTCACTGACACATGAGATTTAATCAT TGAAAACTTTGAAACCATAAGTGGCTAAAGAAAAGTTCAAGGAGAAAATT GATATTGTTGAGTAAACAGCAATGGTATTTATAAGTGGTACCTCCCAAGT GGTACCTCTCATCAAGTAATAGCTCCAACTTATTTTGCTTTCTTCACGAC CATGAAATTTGCCACAAACTTATTCTACGAGCAAAAAAAGCTCGAACTAG CCCACATGCAAACTACTGAGTCGACCTCATTTCCACAACATAACTATAAA TAACTGGAATGGCTACTCTAAGGTCCCAAATGATAAGGAGGGTTCCGAAT AATTGTACCTCCATAAAACCTTTTTTATTCATATACTAAAACCAGACTAT TTAGAGCAATTCAGCTTGTGATAGTTGAAAATATGACATTAAAGAATACT AACATATAATACTAAAGCGACCGTAGTGCAGTGATAGAGCATCCGGAAAC GGCTTGCAAGCTTGCAAGATTCCCAAAATGGTACTTGATGCCTCTCTGCT TGATGCTCAACAATTAAGAGGGGCCCTAAGAGCAGGATCAAGGGTAAGTG GAGCAATCCAGGGAGAAAGAGTGGCACCCTCCCCTACCTGCGTATATAGC TATCGAAAGAGGAGCCTTCGGGTTGCCTCCGACAACTTACTTACTTAACA TACAATATACTTTAAATTTTTAGATTTATTCTTCAATCCATCACGTATTG TTGCTGATTTACATCATACTCCCCATCATAAACTCCATGTCTTTCATCAA AGACCCTCCAAACGAAAAAGCAAGAAACGCTGGTCTATTCATTAATTACA GTGAAATCGTTTTAAACATCTTCTTTACAATGGAGCTTGTCATACGATTC ATGATATTCCCAAACAAAAAGAAATTCATCCGATCACGATTAAACATTGC TGATTTCATGTCTATCATTCCGATTTATATTGATATATTATTTTGCCAAT ACCCATCGTATAAAAGCTATAAAAACTATATCAATATTCTCGTCGTGTTC CGCATCTTGAAGATTTTCCGCTCGTTTCGTTACAATTACACATTACAAGT ACTTTTTAACACACTGAAGTCATCGTTACCTGAACTTCTTCTGCTGGTTT TCTTGATGATTTTGTTAGCAACCGTTTTTGCGTTCGGTTGTTATTTTACC GAACAGGAAGATCCGAATACTGAGTTCCATTCTGTTCTGCATAGTCTATG GTGGGCTTTCATTACTATGACAACGGTAAAAAAAATTACTTTTTCAAACT TTAACTGGGGAATATAGGCAATATACTTATTGGGGGGCACTTAGGCAAAA TCGGGTAAGGGAACGTGCCACTCGCCAGGGTCCCCTTTTTAGGGGATATC AGATATCTGACATGGTCTAAAATTTACTAATTTTCAAGATGTGTTCTGAC AGGATCGACTTTTGGTAATTTTGGACCATTCTCAGGGTGGAAATTAGAAA AAAGTTCAATTTTTCGTCTACTTTTATTCATTTCGGCCACCTGAAAATAG GAAAACTTTTCGATTTTTCTTTCTGACAGGGTCCAACTCCAGCGGCACGT CCCCATCAGCCGCCAAGCCCCCCCCGGTGTATATTCCCTATATAATTTTC TGGAATCTAAGACCAAGATTTTTCTTTATTTACGTTCTCAACGTTTACGT CAGCCTCATGATCATCTTTTCTACCGCTAGGTTGGATATGGCGACATGTA TCCAAACAGTTGGTTCGGACGAGTTATCGGTATTATGGCTGCTATATGTG GTTTACTCATGGTGGCTCTACCAGTATCAGTTGTCGCTACAAATTTCTCA ATCTATTACAGCTATGCTAAAGCTAGAATATCACTACCTCCAAAAAAGGA AGTCCGATATGCAAAAGACGCTAACAATTTCTTAGGACAACCTACGAGTA ATGACGAGAAAGAAAGACTTAAACGGAATAAAATTCAACCGGGTACACCC TGTGTTACACCAATTAAATTGAGTCCGGTGACTAACAGAAAACCCCGGTC ACAGACATTACCACCAATGAATGATGAACGCTTTTCAAAAATTCACCGGG CCGTTCAAAAGATGAGACAAGACGGTTTGTTAAGTAGTAAAAGAAAGAAA ATGGATTTACCAACTCTTGTTATGGTGCTGTCCAGTAAAGGAGATTGGAC CCAACCAAAGTAGTGAAGAAAAAAAACAGAAAAGTGTGGAAAAATCCACA GCCCTATACACCTTTTCGACCGTAGTCGCACGGGCATTTTTTTGTCCACT TTATCCCACTAAAACCGTCCCAATCCTTTTTTGACGCATTTTTCTATTGT CTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073260TCONS_00073260Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073260-proteinTCONS_00073260-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:120537..123740 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KCNC2potassium voltage-gated channel subfamily C member 2 isoform KV3.2b Homo Sapiens
KCNC4potassium voltage-gated channel subfamily C member 4 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29 0.18 0.13 0.15 0.03 0.12 0.23 0.16 0.13 0.21 0.16 0.06 0.48 0.31 0.17 0.27 0.25 0.26 0.53 0.3 0.43 0.45 0.2 0.12 0.41 0.19 0.16 0.1 0.05 0.2