XLOC_045082 (gene) - C. hemisphaerica

Overview
NameXLOC_045082
Unique NameXLOC_045082
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_80:149536..160203-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045082 ID=XLOC_045082|Name=XLOC_045082|organism=Clytia hemisphaerica|type=gene|length=10668bp|location=Sequence derived from alignment at scaffold_80:149536..160203- (Clytia hemisphaerica)
CGATGGCCATGTCCGGACGGTATCAATGTCTTGTTGAAAATCGAGTTGGC TTAGATTCCAAATATGTCAATATTGAGATAGAGGGTGAGTTAATTTTGTC CAACTTTTCTTCTTCCTTCAAGCTTGAATTTTATTCACGTATTGCTTTGC TTGTCCTAACTAATGACCAACAAATCAAAATTTTTATCATCTTTAACATC GTCATAAGAAGAAAACTATATAACTAGCAAGGTCATTTACTTCTTGGTCA ATTTTGCTAATGGTTTCCAATACAGTTTATGTACTGAAAGAATAAGAGAG TATGAGATCATGCCTGAAACTACCTAGTTTTTTTATAAGAATTACATAAG TCGAAATGAGCCTCGTGATTCTTCTGAATTTTCAATTTTGAGGTTTTGAT TATTCTCAAGCAATTCCTGAATTTTAAATATCAAAAGTATGAACCTTCTT ATGATCCTTAAAAATAATGTAAAATACATTTTCTGCTGACGTTTTCAGAG TAAGTAAAACCAACACGGACAACTGCGTTGCCTAAAATTACTTTCCTTTC TTAATTCTTGTTAGGGAAGCCGGTAATCACTGATTTCGAATCGATGAAAG AAGGTTTAGTTGGAAAACCACTTTCACTTCATTGTAACGTGAAAGGTTCA CCAAAACCTCTCGTGCGTTGGATGCGATGGGGAAGCCGCGTGACTAGTTC CCAGTCCATGAAAGTATTGTCAAATGGGACACTGCTGATTGGCTCATTTT CGGCCAATGAGGAGGGAGAATTTGAATGTCATGCGCAGAATAGTTTTGGA AGAACTTCGAAAAAAGTTTACGTCAAGTCAATTGGTAAGTTATACCACAC CCCCCTCCGTTATTCAAACTCCCATTATTCGAATCTTTCTATAATTCTAG CTTTTTAGTCCCCGTCAAGGAGAAACCTTCTCAAAATGATTTCTATATTT CGAATCTTTCTGTAATTCGAACAAATAAGATTCCCCGTTCGATTTCGTTC TAGAGTCAACTCTATATGTTCTTTCCAGGAAGCCAGTACCACCCTACCCC CCCCTACCACGAGCAATTCTTTCTCAAAGATTTTGCCGTGTTGTACTTCG CAATTTTTTATAAGGAGAAGAATGCGATACAGGCTAAACCCCAGGTGCTC TTTCTCTCTGCACCCTGTATTCCCTGCACTGCACTATAGCTTTGGATTTC TTTATCATGACATAAGATCGGTGGAAGTGGGATAAAACAGAGCACTCCTT AAAAGATTAATTGTGTGTTTTATTCATAGAATTATATTTCACAGGTCTAT TGACCTCTACGAAATGATATTGAAATTTAGTGCACAAAACCTCTTAGTAA ACTGTAGTGATTGGTTGCTCCTAGAATTGGTGATTTTTACATGGCGAATA ACTTATCCCGGACTAAATGACTTGTTCTAGTTGAAATTCTTTGTTTTTTA CCTTCTGCCAATAGAACCACCAGTTATCAGTCCCGTCAAAGTGGATCCTG CGATTGCGGGATCCCGTGTCCTGTTCACTTGCACCTGTAATCGCGGAAGT TCAGATGATCTCACAATCACGTGGTACAAAGATGGAATATTAGCCAATCA GATTGATGGAATTGAAAAACAAATTGGAAATCGATATACGTCGAATATTT TCATTGAGAAAGTGAACGCAAAGCATCATGGTCGATATACATGCATTGCG CGTAATCGTGCCGGAGAAATGTCGCGCTTCCAAGACTTTGTCGTTTATGG TAAGTTGACGTCTTTGAAATTTGTTCGATATTATTTAACTTGAATGGTGA TCTAAATGTTTGGAGAAGGAGCGATTGGATTCTCATCTCCCGTTACCTTA GCTGATTGATTGGAAATGACGTACTAGCCAGAAATATTTCTTGTTTAGTA TGAAAAAGGCTATGGGATGATCTAATCCAATGAAACCATAACTTTCTTGT CTAATCTTTACTTTTGCTTTTTCAGAAAAAGCCCTGTTTAAAGATGAACC GAAAGATACTTCAGTGTTGTATAAACATTCCACATCTTTGGCCTGCCTGG CAACGGGATTTCCAGCACCGCAAATCATTTGGATGAAAAAATCTCCTGAT GATTTCTTTGAACCCATCCAACTGAGTAATCGAGTACAACAACTCAATAA TGGTACACTTCATATTACCATGACAACAGGACTGGATGATGGTGAATATG CATGTAAAGCTTTCTTTGATACCAAACAACCGGTATTCATTCCACCCAAG ATGTCAAGAACTGCGCATATTAAAGTTAAAGGTCAGTCACTTTCCAATAT ACACGCTCATTTCGATACCATTACAGTTGGTGCTCTCTAATTCGAAATTC TACTATCCTATACGCTCCATTATTCGATGGAATTCAAAGCCACCGTCAGC AAAACTCTCCTAAACGACGCTCCCTTATTCGATGAAAGTTCAATTCCCTT GAAAATCTATGAATCAGAGGGCGTCAACTGTAGCTTTTGTTAAACATTTC TTTACGTTTATTGCTAAATCAAATTTTCTATCATTCTCTTTTCTTTAAAT CTATGGTAGCCGTGTTGACAGAAGTGTTTCCATTTTGGTCAATACCAAGG CCTCTATGTGACCTTGAAACTGAACCACTCAAACCTTGAGGTATGCCCGA TAAACGCTAATTTTGCCGCACATTTGTAATAACACAAACTTGTCCAGCTT ATCAACATGAATGCTCCGGATAGAGGGACATTGAGCTGATTTGGGTTTAT CAGCTTTCTGCTATAATGATTAATTTTGAACTTCTTTAATGGCTTAAATG ACTTTTCTTTCTTCCGCAGTACCAGCGAGAGTGGTTCATTCCTCACCAAC CATCGCCCGTATGGAAAAAGGGGGTGATGTCCATCTGATATGTTCAATAG TTGGCACGACACAACTCTCTGTGAAATGGTTCATGAATGGGGCATTAATT GATAACCGAAACTCCAAATACCAGATTGAAACTAACGAAAATATCGGTGC TTTACATCAAACATCAATGTTGAATAGCACGTTGGTTATTAAGAATGTTT TGACACGTGACAATGCAACGTATGAATGCATGGGACGAAATTTGTATGGA TCAAATAAAAAGTTTTTTCACATCATGGTTGAAGGTAAGTGATCCAATAA CTAACTGGTGTCATGTTTTCAAAAATCGAAGAAAATAATGTATATTTTTC ACTGTTTTTTAGCTGATTTTTTTGTTAAGTCAGTGCAAACGAGGGTGAAA GTTATTGAACGAGGTAGTTGATATTTTAAAAGTTTAACCAACATTGAAAT GACGGTTCCCCTCGTAAATATTTGAAAAGACCTTTTCAAATGTATCCTTT TCAAATGCATCTTTCATTTTTGTAACCTCAGGTTTATTATGAGTGACATT TCTCAAAAACCGGTAAAACGTTTTTATAATTCTAGAAAAGCCTTCAAAAC CAATCATCATTCGCCAACTAGACTCCACTCCAGATTCAATGCTATTATCC TGGACAGCAGGCTACAATGGAAACTTAGACATCTCTGAATACATTATTCA AATCAAACGTCAAAACGATGAATCAGATCTCATCCTATGGACAGATGCTC AGACGTACTCCGTCGCAGTTTCTAGTGTTCCGTACCGTGTTCTGAATTTA CACCCCGGTACACAGTATATGGTCAGAGTGAAAGCGAAAAATCGGATTGG ATTCAGCGATTACAGTCACGTGTTTTTGTTCAGCACCAAAGAGAAAGGTA TTAAATCAAAACATTAAAATGTTGTGAGACCTTTGAGATTTCTACGTCCT TAAGATTGGATATCATGTTGGTCCTTTTTATGTTAGCTAACATGAGGATG GAGCAAACATAAGGACACCCCCTTCTCACAGACCCGGTGGGACCCTCTCC CATTGGAAAAATTGGCCAAAATACCATCCCCAATGAAGAATTATACTTCA AATTTTGTCCCCACTGAAGATAATCAAATAAAAAAACCGTCACTGCAAAA TATTGTGTTATTTTTCCATCACCACTGAATTTTCTGACTCGAAAACAACA GAATTCGAATACCCACTGTCTTCTTCTCAAACTCGTAAATAGATTTTAAC TTAAATCAGCTAAACAATACCCATAGTATCAAGAAGACTTGACGAGGAGT CAGAACAGGCACAGAATTTTCTTATCAAATCACTCAATTGTTCCACACAT TTTAGCACCATCATCGCCACCACAGAATGTCACTATGGTCGCAATCGCCA AAGATAAATTCTTACTCCAATGGAAGGTTAGAAAACCATTTTACTCAACT TTTCAACATTTAAAAGGGAAGAGACTGGGTCTAAGGAGACTGGGTTTAAG TTTATCAGGAAGGAATGGAGTAAAAATCCTAGAAGTCGATATATTCACAT TTTCAAAGAAAAAGAATCTCGACGTCATTTCCTTGTTAATTCATTATCAT TCTTTTCAAAAGTAGACCGCGCGTTTAAGGTTGATTCGACTACTCAAAAA ACACTTTAGATCCATTATCGGTCTTAAAAAATAATAAGTTGTCAGGAGAT TGAACAATTCAACATTTTTAGTTTTTGTGCTTTGATAAAGTTTGATAAAG GATGAATTTGGTGTTTAATAAGTATCTGAGCTACTCCACTGTATGCAATA TACTCGATACCATTCTCTCTTTTTTCTTAGCATCCATCAAAAACTTCGCG AAACGGAATCCTGACTCGTTACCAGATCTCTTTCACTCCAACCTCCTCTC TTGTTGTCGTGGAGACCAAAATTGTCAACATCCCCTCTGTGACCGAATAC ACGCTTACCAACCTTTATCAATACACTGCATACAAAGTTCAATTACAAGC CGCCACCAAGGTGGGCCTTGGACCACCCTCAACGCCCGTTTATGCAACGA CTTTAGAAGGAGGTGAGAAGAATCACCATTGCATCAATTTCAAGAATACA ATATTCATTTTTCTGTGAATATGGGTTTAATGCTCTACTCAGGAGATTTT TAACAACCTTTGTTTTACTATACTGACAGATTAATCATACGGGAGGTACG GTCAGATAAAGTCAGGCTCGGATTGTATATTATAATTCCGTAGGTCAGAA TTGGCCGTTAAGCGAAGTTCACAAGTTTGAATTTTGAATTTTGACTACTT CTACTTTCATTCCTCATCTCTTACTCAATATCGGTCCCTTTCAGTTCCTT CACAAGCACCGACATCGGTGGAGGCGCATGCGCTTTCTGCACACCAAATT GTCATCACGTGGAAAGCTATCCCTCAAAATGCTGTCAATGGTGTGTTAAA AGGTAATTGGTTAATTCAAGGCCCATTTTCACAATTGTGTTTGTATCATC TTACCAACTTACAGTAGACGGTTGTCGTGCACTTGAATGATGATATCGAA CTTGGGTACTGTGTTTAAGCTAAGATATCTCCTTTCAGTTTTTTGCGAGT TTGAAAATGAGATAATTTACCCATAGTATCCAAAATGTGGAAGAAGATCA CGCGAGAGCTGAATGTTTTTAAAAGTCTCGTCTTCCCCTGCCATTGTAAA AATAATTTACTGAGACATTCAACTTATTGGATATAGGCTGCAATTGACAC AAAATAATGAACAACTTTTGACTCTTAATGACACCTAAATTAACCATAAC TTTGTATCTATTTTTCACCAGGTTATACTGTACAATACACAGATATTGAG CGCTCAGAACATTATCAGACAACTGTCAAAGGATTGCAAGCATCTCTGAC GAATTTGAAAGCGTTTACGAGATATCAGATTCGTGTATCTGCTTACACGA AGATTGGTTTGGGCGTGGCAAGTACCGAGCAACATATAGTGACTTATGAA GACCGTGAGTAAAAATGTCTGGAGATATAACCTTGAGCTAAGTCTATATA CTTATGGAGTACTTTCAAAATATAATTGTCCCCTCGTAGTTTCTTGATTC GTGATATTTTTTCAATTCATGGTTTTGGGTAGCCCTTTTTATCGTTAATT GATTTTCGGGAAAAGTCTAATTTATGAATAGAAAAAAGAACGTCTTTTCG TCTTATTCAATATCTAGGTCCAGGAAAGCCAGCTGATTTTAAAGCCATTC CAGCGAATCCAAAAGAAATCGTGCTCACATGGCGTCCTCCTCTCGAAAAG AACGGGATCATCCTCAACTACAACATCTATTTCAAGTCGGAACACGATGA ATATGAACGGAAATCCGTTGTTCAGCCTCATTTGGTCAAGTACCGTATAC AAGATTTGGTTGTGATGCGGAAATACACTTTTTGGATGAGTGCTGTCACG AGTAAAGGGGAAGGCAACTTTACGGAACATCGTATTGCCCGCACCACTAC CCATGGTAAGATTTTGGCTGTACACGGTTTTTTAAATAAGAATATCCAAA ATTTCTGAAGTATTCGGATGTTATTTAATTTTTGAGTTTTAAGGCTAAAT ATGTTTTTAAAATGTTTCTTTCTTAGTTTCAAGTTGAGTCTATGAAGCCT TGGAATGTTCTTAACCTTTTATTCTTATAACAAAGGTGTAGTATATTTGT CAGGTTTTTGGAAAAGAATGACACAATTAACAGGTTTTATTGTTTGCAAC CAGGCTTCTTTTAACACTGTTGATTAACACTGTATTTTACGCTAATACAC TATAGTTCACGTACATTTACAAGATTAAGCTGAATTATTGAACTAATAAT ATTAAAATCATTTTTAATCATTCTTTCAAATCAGTACCTGCGCGCATCAT TACCCCTCAAAACTTCATCATTCATAAACCCATCGGTAGTGACGTCAGTC TTCCATGCACAGCCGTTGGTTACCCCAAACCCATGATCACGTGGTCAAAC CGCCACCCCTCCGGAAACAATCCGGTCAACACACGACGTTGGATGGCAGA AGACAAACCCATGCTTTTGTACCGGATAACCAAAGATGCGGAAGGGGAGT ATAATTGTACGGCAATGAATTCGTACGGTTCCGATTGGAATGTTGTCAAA CTGAAAGTTCAAGGTTTGTAATAAATTGTTTATCAAATTCTCAATACTTT TGAATGAAAGACTTCTTAAGATTTAGGAGATCTTAAGATCTAGGAAACTC TCATCGAGTCTATACCAACTCTCCTGGTGGTCGTCGGAAACCAGGGTGTG ATGTGTTGTCTTCACCACAAGTGAAGTAAGACTTGCTCTAAGAATCCTAC AATCGTGCCAAAGAATTAGCTGGTGTAGCTTTTCAGTTACAGAAACAGCC AATTGATTGATTGGTTAACTCTCCTGAAAATCTTTACTTGCAACAAATAT TGATCTCAATTTTTCCATTTCTTTCTAGTTCCACCATTTCCTCCTGAAGA AATTTCATCAAGCCTTGTACACAAAACGGATGATTTTTATACACTTAACA TTACGTGGGTCCTGGGCCCTAACGGTGGTTCCACAACAATAAAGAATCAC GTGTTCTACATCATTGAGAATCAACATTTTGATTGGATTGAAGACTCGGT TCAAGGCCATCAAGGCTGGTTTGGTATCAGCAATGTGACATATGATGATG TCATTTATTTCAAAGTTTCATCTGAGAATGCGATTGGTATAGGGTCGATG ACGTCATCAATGAAATTTATCATCGCGCATTCGAATAATGCGTTCGAATC AGGATGTAAGTTAAATTCTATGAACAAGATATTTATGAAAATTTTCCTGA GGCTTTTCTTGTATGGTGCTGAATAAATCCCTTATACTTATGAGCTTATA GAGACGTAACGATCAGAGATGAATCACTAGATAAAAATATATGACAACCA ATTTGCATCTGTATTTTTATGTAAAAATCATATGAAATATACGAAAAGAT GGAGCTTCTTGGTCACTTTTTTCTTGGAAAATTTAAAATTTCTCAAATCA TTCTTTTCTCATCTAGCTGTCATTCAGATGTACGCTGCACCGTTGGTTGC TCAAAAACAAAATAAAAAGCCGAGCAGTTTACAACGGTTCTTAAAACCAA TCTTAATCTCAGCTGTCGCCTTTGTCACGCTATTGATGGTGTTACTATTG GTCGCTTCGTATGATCGCGAGGAGCATAGAATGAGAGGTATGTATTCAGG CTATCATTCAATTCTGTTAAAAAGTTTCTTTTCTATCGTTCTTACGTGCA GATATTTAGCTAAACAAACTTAATTAAGTTCCAAAGCCCTCAAAACGCAG TCATTCTAGCATTATTTCTCTCCTCCTTTGAAGATCATTTTCTCTTATTC CCTAGCACTTTTCAGTAGATTTTTCTTTTTGGATGTTTGAGCTGTTTAAT CTTAGATGTTTGATTGACAGTTATTGTTATCTACAATTTTATGTTTCAGA GCCGCGTTGTAGCCGTCTAATCTGCCGATGCTCTTGTAAGCAACATAAAG AATATAACCCAGCTCCATACGGCGAGCCTGGCCTTTTGTGGCCGTGGAAT ATCAAACAAAACCGACACAGTGGAGCCTTTGATATGAAAGATGAGTTACT ACCAAACGATACTATAGAGATGAAATATTGCAATGGAACTGCGTTCAATT ATAACGCTTTACAACAAAACGGGAATGCGTCCGGCGGGAGCCTGGGACGA CCAAAAATGCAAAACACTAACAAATTTAATGATTTTGAGCCGGTAGTACT CTTTACACCAAGTAAAACACCGGATAATCATTCCTTTGCTGCCGGTAATC CGCAACCGAAACTTTCAAACGGTAACAAGAGAGGTGCGGGGAGCGATGTC GGAGTGAGGGTAGCTCCTCCGAGAACACAGGCTATTAATAACACGGCAGA GAGACCCATATCAAGTAGATACGCATCAACTCCGTCTATTATAGAGAAAT ATTTTCAATCGCAAGAACAGTGTGGAAACACGGCTCTCAAACAAAATGGA TACGGTAATCGATTCGCAACCGGAGATGATAACGTACGGAATAGTATTCT TACGGAAGATTCAATAGACTTTACAGAGCTTGATGGAGGTGGAGTGAATT CNCGATGCTCTTGTAAGCAACATAAAGAATATAACCCAGCTCCATACGGC GAGCCTGGCCTTTTGTGGCCGTGGAATATCAAACAAAACCGACACAGTGG AGCCTTTGATATGAAAGATGAGTTACTACCAAACGATACTATAGAGATGA AATATTGCAATGGAACTGCGTTCAATTATAACGCTTTACAACAAAACGGG AATGCGTCCGGCGGGAGCCTGGGACGACCAAAAATGCAAAACACTAACAA ATTTAATGATTTTGAGCCGGTAGTACTCTTTACGCCAAGTAAAACACCGG ATAATCATTCCTTTGCTGCCGGTAATCCGCAACCGAAACTTTCAAACGGT AACAAGAGAGGTACGGGGAGTGACGTCGGAGTGAGGGTAGCTCCTCCGAG AACACAGGCTAATAATAACACGGCAGAGAGACCCATATCAAGTAGATACG CATCAACTCCGTCTATTATAGAGAAATATTTTCAATCGCAAGAACAGTGT GGAAACACGGCTCTCAAACAAAATGGATACGGTAATCGATTCGCAACCGG AGATGATAACGTACGGAATAGTATTCTTACGGAAGATTCAATAGACTTTA CAGAGCTTGATGGAGGTGGAGTCAATTCTCAAAAAGCAGCTCCTAAAGAC AATATCCAACCACTAGAACAATTACCAGTCAGCCCACCAGAGTATAACGA ACTTTATTCCAATGAACCCGAAACGGGTGATCCAAGTAAACCCTCACCGC CTAATTATCGGGATATTATAAGTAGTTTATCGGATTACTCGGATGCACCA CGTGCGCTGTTTCGGAAAGAGGGGGAACCACCGAGACGTGGAAAACGGAA TCGTAAAAGTTTAGATAGTTTGTTATTAAAAACATTAGAAGATATAGAGG AGCAACAAATTTTGACGAATCATGCAAATGTGAGCAATACGCCGGCCCTT GAGAGACACGTAGCGATAGTACGGGATGCGTTACAGAAAGCTACGCGTTC ATTTGATTCAGTTTCGTCAACGTGTAGTAGCTCTGTAGGTGAGTTACGGC GTGCTTTTGAATTCGGTAAGAAATACGGGTTACAGAATTATGGTGAGATT CCGAATTACTTACAAGAATCAATGGATGATTTAACTCTGGATGAAACCAA TGAAGAATTTGATTTTGCTGAGCATGAGAAATTATTGGATTTAATGGCTT TAACCAATTTCTCTGAACAACCGAGAAGTTCGAATGATATTGCAGTCAAG ATTCCGTTACCTGTCCGGCTGACTGATTCAGATGAAGAATCAGATCCGGA CGATTTAGATGAATATGAACAGGATGGATTGAATGGCTATGTTAAAAAAG AAAATCCTACATTATCATTGGTCTAAATTTTTATATCTTGTCTAGATAAA AAAGATTATATAGAGCCTGATCTAATGACAAAGTGCCCAAAAAGCTTAGT CTGGGTCTAAGCTTTCCGTAGCTAAAAAGTGAAGTTAGTTTTGTGATTTT TGCGCCAAAATCTTTTTCTCTAAACAGTTGGCTGACCATGTCTCTTAGTC CCAACATTAAGTATTATTTCTCTACAGATTGAAGATTTCCTCAATGTCAA GTCTAGGATTTTCCTTGAATAGTTTTTTTCCAATTTTTAGTTTTAAGAAT TTTCTTTGTAAAAAAGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072631TCONS_00072631Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072631-proteinTCONS_00072631-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_80supercontigscaffold_80:149536..160203 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DCCPREDICTED: netrin receptor DCC isoform X1 Homo Sapiens
NEO1PREDICTED: neogenin isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22 0.28 0.3 0.11 5.16 4.71 6.7 6.99 1.74 2.27 2.42 1.9 2.2 1.9 0.99 1.21 1.51 1.61 5.55 6.11 2.56 2.47 0.91 1.55 1.07 1.06 1.55 1.19 1.72 1.97