XLOC_044932 (gene) - C. hemisphaerica

Overview
NameXLOC_044932
Unique NameXLOC_044932
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:196701..202180+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044932 ID=XLOC_044932|Name=XLOC_044932|organism=Clytia hemisphaerica|type=gene|length=5480bp|location=Sequence derived from alignment at scaffold_77:196701..202180+ (Clytia hemisphaerica)
CGAATagtttttttttgggaaaaatcgtAAAACGTTTTCAAGAAGCCGAC
ACAAGGAAAACTGGGGATTGAAATCTTTACATCTCTGAGAATGTAAACTT
TCCTTAAGTATTTCTTGACAGCAAGGAAAACTATTATTTACGATGAAATT
CAACCTGGAAAAAGTTCTCCGTTCATGATAGTTTTGCATTCCCTATCGTA
AAATGTTCCTGTTGATGACAATATCGCTTGGGATTTCAACATAGAAAGAG
GTGGGTTTTTAGCGGGGTAATAGAATAATGCAAACTTCAGTGCTTTGAGC
GAAACGTTCTGcgtcaaaaacaaaataattacaGAATGATATTGCGATAC
CTTTAGAAAAAGTGTTCCTCTTTCAGAGGTAATTATTTTAATAATCTCCA
GAGATAATTAATCATGATATCTTTTTGTTGTTCGGTAAAACGTTCTTCCG
CTTATTAATCCTTTTGGAAACCACATCTCTGCAGAAAggaacatttttgc
aacaaaaaaaaGGCCGAGAGCAAAACAGATAAAAAGGATTTGAATTGAAT
TCagtacaaaatttcaaatccaTTTCAGAGAAGTTGGTTTTCGAGGTATG
TTCTGATCTTGATTGActtgtatttattcaaaattcaatattgtCCCTCT
TCTGAAACACTTTACCGACGTTCTATTTCATGAGTTTTCGGATTTATTTT
TTTAGACAAGATATGAAGGTTGTAACACTGCTACTTGCATGTGTGGTGGT
AGCACAATGTCATTCCACACTTCACCAGGATGAAACGAGTAAGTGTTGTT
CAATTTACGTCTTTCCCCAGGCCTAAAAAAGGAGAAATATTTTCATGCGT
GACAAGTTAATCATNCCCCCAGGCCTAAAAAAGGAGAAATATTTTCATGC
GTGACAAGTTGACTCTTAATCATTAGTATTTCGAACATTTTCAAACTATC
AGCCAACTTGTATTAAAGATTATAATTTTGTTTCTATTTCAGAATTAGAC
GAAGATTTGGCAAAATTAACAAAGATGGTGTTGGGACGCTGGAAGAATAA
AAGATCACACAGGTCTTCTCGTCCCACTTCAATACCAAGAGGTGAGTGAT
TCTAAAGAAGTTTCTAACGTAATCCGCCCAATTTTCGCCTTAACACAGGG
AATAGGGCAAAAGTAAGGTTCACGCGTTAAGGgtcaaacatattttttat
atcttATTTTTCCCAAGAGTCAAAATTCAGTGtcgttatttttttaaaca
tttctcGTTTTTTTATCAGAATGTCCTGTCAAAGTCGGTGCACGTCGTAA
CTGTCAGAAAGAGCGACTGACCGATATCGCAAGAGCTCGATATTGGTACA
AAATTTCCGATGAAAACACCAACATTGATTTTCCTTTGGCTTCAACGATT
CCCTGGTTAGCGCAGAATCTATCTGAAACCAAATATTATTACGCCTTGGA
TCCATTTGAATCGCGACATTTAGTGCTTCTTCAAACGTGGACAAACATAT
TGCTAAACACCATCTTTCCTGGTTTGACTGCTGCTTTTAACACGACTTCT
TTCGAAAGCCCGCAAGAATATGCAATTGCTTATAAAGCATGGCAGCAATC
TGTTCAGGtgagaaaatcattttcttaacatgttctcttCATCTGTGCGC
TTTTCCATTTGCGCAACTTGAACATAAGATTTGGTGTGTCCCGATATTTC
TTCTCTTTCCAATCACATAGAGAGTTTTTCTAGAACATTTCTGGAAGTTT
CATTCTCTCCGACACTTCATGTTGAACAATAAATTATTCACTTCTTCTTT
TGGTGTAGGCGACAAAAGCACCTCAATATTTTGCCAACCCATCGCAATTC
CCTACAATCACAGACCATGTTTCGACGGGTCACTGGCAAACTGACGAGGC
GTTTACTCAACGAAGATTGACTGGTCAATGTCCCTACTTTTTGAAGAAAG
TCGTTGATGATGAAGGTGTGTTGAAGAAATCTTCATGagatgatttttct
tctttttcttatttcGTATGccccttatcggggaaaacttcgtcgggaaa
aagtgacgaaattttggacaagtgacgaatattttccccgacgaaaattt
tccccggccttaatgcgtttaccaactaccagcaagtgaNCGCCGATATC
GTTCTTTGTGTTGGGAGATGACGGACTTTTACACGTAGTTGCGATCCAAA
GAAATCCTGTTCAAAGTATGTTTAACTTCTATTTTTGATTAGGTATGGGG
TTTGAGTGGAGGAGGAAACTTGATCCAAGTAACTACTGACGAAAACGTCT
TTTCTCGATTGTAATTCTANagacgaaaattttcccggacgaagttttcc
ccgataaggtatagtGCTACTCTACTTACGTGAAAGAAGTGAACACTAGG
CTAACCTTCCTCcatgactttttttaaaatttaataacagaaaaatattt
cttcttaCAGATGGCAAAGGCTACCACGTGGACGATTTGAAACCTTTAGT
CAACACCAAattctttgaagactttgaaATGAAATATTCTGCTACAGAAT
CTGTGTCTATTGAACAGGTAATTACAATTTaattctttcagaaaaacttt
taaagaattgttatgaaattttattaaacTATTGCTTTCGCATCAGTACA
ATGAAGACGAGTATCAATTTAGAACAGCCCCCTAGCGGTagctctgatca
cgatatcacacAATTGTTTGCCTTCAATCATGatcacgaaaatcagcaaa
aaatggataatcacgcatccctttgaaaaagtccaaatcacgtagCATGg
ctcaaatattttttcacgtTTTACGTTTCGCGtaatcacgttttgacctc
tgatcacgcaatcacgcaaaaaagTCCTTATCACGTCATCACACAAACTG
TTTGGGGGGGCTCTTAGAACCCAGTCATGATTGTGCTGTCTTAAATCAAA
TAGAGAAATATTCGTCtgcttttcaactttttttatttattatttatagg
CGATTGAGGACGGCCGATTGTTTGTACTTCACATCCCTGAAATGGTGGGC
ATTAAAAACGTACCCGACGTATTCGCACCGCTATTGCAAGATCGCAAACT
TGCTGACGTCAAGTCGCCGATATCGTTCTTTGTGTTGGGAGATGACGGAC
TTTTACACGTAGTTGCGATCCAAAGAAATCCTGTTCAAAGTATGTTTAAC
TTCTATTTTTGATTAGGTATGGGGTTTGAGTGGAGGAGGAAACTTGATCC
AAGTAACTACTGACGAAAACGTCTTTTCTCGATTGTAATTCtataaacaa
agaaagatttcttTCTGCACAATCACTGTACAAAGCACTGAGATAATAAA
CTGAAAGCTAATCtgtaaaacttttctttttttccagcaTCCGAAGTTGA
TACATCAGAAAGTTCCAATTGGCTTTTAGCTAAAGGAGAAGCTGAGATGG
CCTCGGACCTTTATTGTCAAGCTAAAATACATCTCGGAGAAGTCCATTTC
GTGTCCACTATCTACTGTTTGTCCTTTAGACGTCATTTAAGCACCAAGCA
TCCCCTCTACGATTTCTTTAAGCACCATTGCGAAGGGACTGTCCCTCATA
TCACCACAGTCTTTGAGACTTTGACCACACCCAATGCTGCGGGTAGTGTC
ATCTACGGAACCGGGAATCAAGGTTTTCTTGATTTGTCGCAAAAAGCTTT
TGCAGAACGAGATTATGAAAGCAACACTTATGAAGATTTCATTGAGGTAA
GAACAATGCGTAAAGGCTTTTTACCCTTTATTAAGATTTGACCTGGGTAG
TCTGTTAAACTAAATGGCTTATGCAAAATAGTAAATTTGTGCAAATGCGT
ACATAATATTTCTTGCCGACTTTGACACTATCCCTTAGAATCTTGTTTTA
AAGAATCCAATATTTTGCGTTTCCAGGGTAACGGTTTGGATGACGAGGAT
ATCAAATATTACCCTTTCCGTGATGACGTCAAAGAAATCATGAAAGAATA
CGAGACTTTcattgatgacatcatcaagACTTATTACAGAAGAGGAAGAA
TTCACAGGGACGCTGAATTACAATCATGGGCTAACGAGTTGTCGCCTGAA
GGAACGGTTCAACCTGATGCTGGGCGAGGCAAGGTAAGGAAGCACCCTTA
ATTTATAAATATAATCATACCCCTATCTCATTTTCCAAAGTAAAGCTTTT
CCAGTAGATATTATTTATTCACCAGTGGataattttaggaatttttacAG
TGGGTTATAGCTACAGGTCTACATTGGCTATGATATAGAGAGTGTATTAC
TTAACAGCCATAACTTGAGATTgagttttcttcaaaaaacgAAGAGCTTC
AATCTTTGGCTTTCTTATTTCACGTGACTCTCACAATACAGTACCGTcac
cagaggtttgtttttcttctcttaCAGTTCATCTCTTACCAGGGCTTGCC
AGCTCAAATAACAACTCTCTTGTTCTTTCATTTAGATGAAAGGTTTTCCA
GCAAAGTTCGAAACATGCGATCAGTTGAGGACGTTCTTGAAACGATTTCT
GTGGATTAACTTGTTCCACACTTCAGCAAATTATCCTGATTACAGAGATT
TTATGCCAACTTCACCAACTAGACTTTATCAAAATCTAGATGGAACAGAC
CTGCCTTTATTGAAAGCTCTTACTGGGAAACTTTACAATGTTGTGAGTAT
ATTATGTGGTTTTTATTTGACGACTTTCAAACTACCaactgaaaattgaa
taaattaaTAGGGTGTTTTATATCTACAAATCCTAGGCCTATTAGTTGAT
GTTATTTTATAACTTAGATCATTTACAGGGCTTGATCGCTTGGCCGCACG
GGTCTCTTTAATACCATATCTAtataattaatttcaaaattgaattcCTT
TTCAGCAATATATGATGTTCAGAGGTTTGCTGGCCAATTTCCGAGTGAAC
AGGATTTTCTCATACTGGAAAGACATCACAAACCCGACATACCGACGAAT
TGTGCGCAAAGCTTTTTATCGCTTGAACACCATCGTCCAAAAGAAGCTAG
AAACAAGAAATGCTGAACGTAAAGCCAAAAATCAATTGGGTTATCAAATC
ATGGAACCAAAATGGCTGACAAATAGCGTCcatatttgaaaatgtttcaa
cCAAGCTatcatttattttgatttttttgtccatatttATCGCTTATTTA
ATAATCGTTTAATAATcttataattttctttatttaaccTAAGATACAAA
TATTAATTCCGAAATcccattttcgatttcaagttAATGCGTAATTGATA
TTAGAAAATTAAGACTAAACCTCTTTTTTTACACTCCAAAGTGTGTTGCA
AGCTAACGTTGCGATAAAGCGGGTGTATTGGCTTGCAATCTCCCACCCAG
AGCCATTTGaaccattttttgatttttttgatggcCCTTGGTACTTTAGT
GAGTGCTCTATCAAAGAATAATGAAATAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072359TCONS_00072359Clytia hemisphaericatranscript
TCONS_00072360TCONS_00072360Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072359-proteinTCONS_00072359-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:196701..202180 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
592.28	579.33	213.83	146.43	45.3	40.23	357.99	351.23	268.28	300.5	175.03	218.23	40.17	28.01	6.19	8.31	28.83	23.24	42.06	68.6	6.1	5.18	191.01	159.43	1.05	1.23	9.43	11.91	80.14	96.38