TCONS_00072359-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072359-protein
Unique NameTCONS_00072359-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length657

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072359-protein ID=TCONS_00072359-protein|Name=TCONS_00072359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=657bp
MKVVTLLLACVVVAQCHSTLHQDETKLDEDLAKLTKMVLGRWKNKRSHRS
SRPTSIPRECPVKVGARRNCQKERLTDIARARYWYKISDENTNIDFPLAS
TIPWLAQNLSETKYYYALDPFESRHLVLLQTWTNILLNTIFPGLTAAFNT
TSFESPQEYAIAYKAWQQSVQATKAPQYFANPSQFPTITDHVSTGHWQTD
EAFTQRRLTGQCPYFLKKVVDDEDGKGYHVDDLKPLVNTKFFEDFEMKYS
ATESVSIEQAIEDGRLFVLHIPEMVGIKNVPDVFAPLLQDRKLADVKSPI
SFFVLGDDGLLHVVAIQRNPVQTSEVDTSESSNWLLAKGEAEMASDLYCQ
AKIHLGEVHFVSTIYCLSFRRHLSTKHPLYDFFKHHCEGTVPHITTVFET
LTTPNAAGSVIYGTGNQGFLDLSQKAFAERDYESNTYEDFIEGNGLDDED
IKYYPFRDDVKEIMKEYETFIDDIIKTYYRRGRIHRDAELQSWANELSPE
GTVQPDAGRGKMKGFPAKFETCDQLRTFLKRFLWINLFHTSANYPDYRDF
MPTSPTRLYQNLDGTDLPLLKALTGKLYNVQYMMFRGLLANFRVNRIFSY
WKDITNPTYRRIVRKAFYRLNTIVQKKLETRNAERKAKNQLGYQIMEPKW
LTNSVHI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044932XLOC_044932Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072359TCONS_00072359Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 183..646
e-value: 1.3E-19
score: 70.0
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 54..657
score: 34.134
IPR013819Lipoxygenase, C-terminalSUPERFAMILY48484Lipoxigenasecoord: 81..657
NoneNo IPR availableGENE3D1.20.245.10coord: 347..657
e-value: 2.9E-43
score: 147.8
NoneNo IPR availableGENE3D3.10.450.60coord: 232..344
e-value: 3.9E-7
score: 29.8

Blast
[Close]
BLAST of TCONS_00072359-protein vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.876e-23
Identity = 122/495 (24.65%), Postives = 204/495 (41.21%), Query Frame = 0 
Query:  187 TITDHVSTGHWQTDEAFTQRRLTGQCPYFLKKVVDDEDGKGYHVDDLKPLVNTKFFEDFEMKYSATESVSIEQAIEDGRLFVLHIPEMVGIKNVPDVFAPLLQDRKLADVKSPISFFVLGDDGLLHVVAIQRNPVQTSE----VDTSESSNWLLAKGEAEMASDLYCQAKI-HLGEVHFVSTIYCLSFRRHLSTKHPLYDFFKHHCEGTVPHITTVFETLTTPNAAGSVIYGTGNQGFLDLSQKAFAERDYESNTYEDFIEGNGLDD-EDIKYYPFRDDVKEIMKEYETFIDDIIKTYYRRGR-IHRDAELQSWANELSPEGTVQPDAGRGKMKGFPAKFETCDQLRTFLKRFLWI-NLFHTSANYP--DYRDFMPTSPTRLYQNLDGTDLPLLKALTGKLYNVQYMMFRG----------LLANFRVNRIF--SYWKD--ITNPTYRRIVRKAFYRLNTIVQKKLETRNAERKAKNQLGYQIMEPKWLTNSVHI 657
            TI++ V   HWQ D  F  + L G  P  +++  +  +         K  V T+  E      S    +S+EQ ++ G +F++    + GI       A       L  + +PI          +  +AIQ N +   E    + +    +WLLAK     +SD +    I HL   H VS ++ ++  R L   HP++     H   T+   T   E L            TG  G + + Q+A  +  Y S  + + I+  G++  EDI YY +RDD   + +   TF  +++  YY   + +  D ELQ + N++   G      GR K  GFP   ++ +QL  +L   ++  +  H + N+   D+  ++P +P  +         P  K +      V  +  RG           L+ F+ N +F   Y ++  I  P    + R   +R N    + + +  AER  K QL Y  + P  + NSV I
Sbjct:  218 TISERV-MNHWQEDLMFGYQFLNGCNPVLIRRCTELPE---------KLPVTTEMVE-----CSLERQLSLEQEVQQGNIFIVDFELLDGID------ANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPSDAKYDWLLAKIWVR-SSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGM----RGR-KSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTM-----RAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMAR---FRKNL---EAIVSVIAERNKKKQLPYYYLSPDRIPNSVAI 674
The following BLAST results are available for this feature:
BLAST of TCONS_00072359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX51.876e-2324.65Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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