XLOC_044795 (gene) - C. hemisphaerica

Overview
NameXLOC_044795
Unique NameXLOC_044795
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_71:849100..856698+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044795 ID=XLOC_044795|Name=XLOC_044795|organism=Clytia hemisphaerica|type=gene|length=7599bp|location=Sequence derived from alignment at scaffold_71:849100..856698+ (Clytia hemisphaerica)
TTTGAATATTCTACATTTTGTTTTCCACTTGCTGTTGGCAAAACTTTTAC
ATTAGAAGATGGAAAAAGAAAAGCTTGAGAGTTTTGACGAAATGGAATAA
CCAAAAATAGCAACAGCCACAACGTCATCATGGAGAAACTTAAAATAGCT
TGTGTATTTTTACATCTCATTGTAACTTTAACTTTAGCATTAGAGCAAAA
TGGGGCGGTTTATAGAGAAGAAATTACAAACGCTACAGTCGTCAACAAAA
CAGAGTTTCATACAGACACGGTCAACCATAAGCTTCATTGCCTTATGAGA
CCATATAGTGTTTGTTTCATTGTGGAAGTTACTGAAACAGTGCCTGACAA
AGAATACCAATGTCGTTTCTACGTCGGAAAATTTGTGAGTGTTGAAACAG
CGCCTGGGCTAGCAACCATCTATGAATCATATGCTGCTTGCTCGACTCAT
CTATGTCAAGACCTACAGGGACCTACACATGATACAGACGGTGTCTATGC
TATAAAGTTAGGTGGGAGCCCGATCAAGGTTTGGTGTGACATGACTCAGA
ATGATGGTGGATGGACGACCATACAACGTCGCATTGATGGTTCGGTCAAT
TTCGAAAGATTGTGGCAAGACTATAAAGTTGGATTTGGAGAAGCTTCAGG
GAATTATTGGTTAGGTAACGACCATCTTCATCATATCACTGACCACTACC
AAAATGTTTTGGTTCGTATTAAAGTCTTGGCGCCTGATGGAGACAGAGCT
GAAATCATCCAGGAGAATTTTTATGTTGCTGATGAAGCGAATTGGTACAG
AGTTCGAACTGGGACATTCGTTTCAGGACATAGTGGTTTGAAAAATGATT
GGAACTACCATAATAATGTTGGCTTCACTACAACGTAAGCTATTTCAAAT
TTCGTTCATAGTGGTAAAGGTTTGCCGAAGTCGAACCGAAAATATCTAAC
CCAACGAAGTTAGGAGGGGATGCCATAAATATTTCACATAAATATTCCCA
CTTCTTAAAAACAAAGATAATTTTCCCTTAAAATCGCTAGTTTAGGATCG
ATAGATGTATAGTTtcgcaagctagacgactaaatTTAATAGAGAAGGTA
AAATGATGGTAAGGAAAACCTAGAGGACAATATTATACAAACTAACATTA
TCACATATTAATTATCGCATTATCATAAAACATCTAAATATTCaaaaggt
aaaatataaatatactagccggtacccggcgtcgcacgccggtttagctg
tttgctgaacgcatttaaagtcctttgagatgttgggaagatggcttaaa
cacgatgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagattttttt
tctcgcttcgctcgcgttatatttgccgtagttcttgatgtttaggaaaa
ctttgatgtcaagataagcggagtgaaataatagacatgacacccTATTC
TTCGAAAAGAGGCAGCCCGGGGGAGGggatacttaggcaagagaagggta
taggtatgtgccggccttaagtgtgcctttttgaaacatggcagtttgaa
aaatcggaaaataaaacttcagtcccactgaatcttttttgcccccagaa
agatagaaatttggtcaaattagttccaaaaagtgaattaaaattcacac
aatttcccttgtttcttctcctctttattctgctaagggtccgaggggca
gggccaaaagtcagctcgcaaccatagtcccccggaaggcagctaggaca
cgcagacaaaaaagcgtgatagatagcgcaattttatattgtttttttat
aaaataacttcgtcataacttcaataatctttcaaattcaacaatgactt
agatttacagcaaaatgattatcgacatacatgtttaaaggtccgttttt
acgaagaaagaattctagtttttgcCGCCTTTTTACCGCCTTTTACCGCC
TACCgcatttttaatgttgctgttgttctaacaaacttgttatgtgattc
ttgtgttttattttatatttgttcttttctttaacagattctgtttaaaa
aatttcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcaaaacaaagt
ctttataaaacggcgcgaatatcgttaaacaaatttgtggagcaagaaca
aaataaaagtcatcttttaaaagaacaaaacattgctttcgaaaacgaaa
gtgacacacaaaaaacaaaccaacaaagaaacacacatacagactacggc
tattaatatatagatgaatATACATCACCGAAGGCTAATAAATCCAATAG
CAAACGAAATCCTAATgaatatgttttattatatgccCAGAGacgaaaac
aaaacataaatacTCTATTTTGTAGAGAGATTCACATAAAAAGCTCACAC
AAAGcgaacattcgaatgtttttcctTCTAATTGTTTTTTAATGACTTAT
ATTCACGAAACTTACAATTGAACTATTATGACTTTCtttaacaacaacaa
aataaaagtaacaaaaagtcaattttcgaaTGCAAAATTATATATGCCCT
TTAATTATTCTTCTCAATTTTCAACAGAAGTAGCCTGAAATGTGATCTTT
GTTtgaacgaaaaatttgaaatctcttTGCGTAAAGACAATTTACTGAAC
TGTAGATCTGAACTTATCTCAAAATGCCGGCACATAAACAAACACTTACT
CGAAAACTTCGATTCTAAtgattgacgtcaattttaatACATAGTAGgtt
tcgttggttattggattcaCATTAACCTTCGATGATCCTGAAATTGTACT
ATCGGCTTCCCCTCGGCTTTACCTATTGATATCTGCTTATTATCCTAGTT
AGCTCCAGTTTAAACGTATATTATCTCCGGCTTtcggaaaaattcaaaat
tgacctTGCCTTTACAGCAAATTTGATTGAGCTGACCTTAAATTCTTAAT
TTCAGAGACGTGGATAATGATAACAGCGATGAAAATTGTGCAGAAAGGAA
TCGAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAATGGAA
TATATGGTCGCAATGATAATAAGGGAATTATCTCCAGATCTTTCAAAACC
CTGGTGTCAATGAAGGAAGTCTCTACTGCCGTCAAAAGGAAAGACTGAAA
GGTGGACATCATTTGAAATGGATCATATTCAATTGGAATGATTATAATCG
GGTTTAAACAGTCTGATTTGAGCCAGAGAGCCAACCCAGGTTTGGGCATT
GAAGGTTGACTCGCGGCCtcgaaaattcgagaaaatcaaaaaaataaaac
cccTAGAGAGTCACAAGGATCAATTATACAAAACGTTAAGCCAAATCGGA
CTATTTCTGAAGTTACCAGCCTAACAAAAGATTTTAATCTCGCTTTGGCG
CGAAACTCGTCACCATTCGTCACCATACCCcgacattctttttttatgat
taaaaaacAGCTAATTTATCTATTCAGTAGATCCCTAGAAACTAAAACTA
TAGTTACAGGTAATGTTATTGAAATCAATAATTAATCATATAAAACCAAT
TCAGGATTAAAATGCATTATGGGTAATtttttcccttcaaaatgaCAAAT
GGATTCaagtactttttaaaaatgaatatCAAAACtgacattttgaatat
ttatttagaAAGATTTCTAAATTCCCCATTATGATACGATattacaaaat
ttttttccaaacaaaaataATGTACAACAAATTTGAATATTCTACATTTT
GTTTTCCACTTGCTGTGGGCAAAACTTCTACATTGGAAGATGGAAATAGA
AAAGCTTGAGAGTTTTGACGAAATGGAATAACCAAGAACAACAGCCACAA
ACATCGCATCATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCA
TTGTAACTTTAACTTTAGCATTAGAGCAAAATGGAGCAGTTTATAGAGAA
GAAATTACAAACGCTACAGTCATCAACAAAACAGAGTTTCATACAGACAC
AGTCAACCATAAGCTTCATTGCCTTATAAGACCATATAGTTTTTGTTTCA
TTGTGGAAGTTACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTC
TACGTCGGAAAATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCAT
CTATGAATCATATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGG
GACCTACACATGATACAGACGGTGTTTATACTATACAGTTAGGTGGGAGC
CCGATCAAGGTTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGAC
CATACAACGTCGCATTGATGGTTCGGTCGATTTCCAAAGATTGTGGCAAG
ACTATAAAGTTGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAAC
GACCATCTTCATCATATCACTGACCACTACCAAAATGTTCTGGTTCGTAT
TAAAGTCTTGGCACCTGATGGAGACAGAGCTGAAATCATCTCAGAGAATT
TTTTTGTTGCTGACGCAGCGAATTGGTACAGGGTTCGAACTGGGACATTC
GTTTCAGGACATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGT
TGGCTTCACTACAACGTAAGCTATTTCAAATTTCGTTCATAGTGGTAAAG
GTTTGCCGAAGTCGAACCGAAACTATCTAACCCAACGAAGTTAGGAGGGG
ATGCCATAAATATTTCACATAAATATTCCCACTTCTTAAAAACAGATATA
ATTTTCCCTTAAAATCGCTAGTTTAGGATCGATAGATGTATAGTTtcgca
agctagacgactaaatTTAATAGAGAAGGTAAAATGATGGTAAGGAAAAC
CTAGAGGACAATATTATACAAACTAACATTATCACATATTAGTTATCGCA
TTATCATAAAACATCTaaatattcaataggtaaaataTAATTATATGAAT
ATACATCACCGAAGGCTAATAAATCCAATAGCCAACGAAATCCTAATgaa
tatgttttattatatgccCAGAGacgaaaacaaaacataaatgCTCTATT
TTGTAGAGAGATTCACATAAAACGCTCACACAAAGCgaacattcgaattt
ttttccttctaaTTGTTTTTTAATGACTTATGTTCACGAAACTTACAATT
GAACTATTATGACTTTCtttaacaacaacaaaataaaagtaacaaaaagt
caattttcgaaTGCAAAATTATATATGCCCTTTAATTATTCTTCTCAATT
TTCAACAGAAGTAGCCTGAAATGTGATCTTTGTTtgaacgaaaaatttga
aatctcttTGCGTATAGACAATTTACTGAACTCTAGATCTGAACTTATCT
CAAAATACCGGCACATAAACAAACACTTGCTCGAAAACTTCGATTCTAAT
GATTGACGTTAATTTTAATACATATATAGgtttcgttggttattggattc
aTTAACCTTCGATGATCCTGAAATTGTACTCTCGGCTTCCCCTCGGTTTT
ACCTATTGATATCTGCTTATTATCCTTAACTTCAGTTTAAAAGTATATTA
TTTCCGGcttttggaaaaattcaaaattgacctTGCCTTTACAGCAAATT
TGATTGAGCTGACCTTAAATTCTTAATTTCAGAGACGTGGATAATGATAA
CAGCAATGAAAATTGTGCAGAAAGGAATCGAGGTGGATTTTGGTATACTG
GATGTGTCCGCTTTAATGCTAATGGAATATATGGTCGCAATGATAACAAG
GGAATTATCTCCAGATCTTTCAAAGCCCTGGTGTCAATGAAGGAAGTCTC
TATTGCCGTCAAAAGGAAAGACTGAAAGGTGGACATCATTTGAAATGGAT
CATATTCAATTGGAATGATTATAATCGGGtttaaacaaattttattcACG
AAATTTGGGACgaaatggagtttttacaagctcttatttgatttggttgg
tcgttaaccagtaataaaacaattatcTTTGTCACTTTTTCTAAacaacg
cgtcatttttattactttaaacatgaccaattattaaagtatcttataaa
aactccatcttatctaagaaatttcgaaaagctcgtttttgtattatttt
gtAAAAGAGAAAAACTTTGGATATTCACTGAAAATGTATCAGAGCTTGag
accacgttcacacgctacggttccgtttcgctccgaaacgaaacgaagCC
AATCTTTTGGttaaattcaagttttacgtcacttctaaccaatagaatgg
cttcatttcgtttcggggCGAAACGGTGCCgttacgtgcgaacatggtca
cGTGGCTAGAAAATAAGCTCCAGTTATGTGTTGTAGATAAACATTCCGCg
ataagaaaaaaaagaacagcTATCCTTCTGAGGATATTCAAATGGAGAGG
CGTGAGTTCCTTGGATGGCATTGAACGAATCAGCAGCACTGACTTTCAAT
TTTTAGAAGAGAAANTCAAATGGAGAGACGTGAGTTCCTTGGATGGTATT
GAACGAATCAGCAGCACTGACTTTCAATTTTTAGAAGAGAAAgaataaat
cttgaaaaaaaatgaatatgctctgAAGTAATAACTCATACCTTGCCGCC
TTTGATGCCGTGAGGTCCACGTTCACCAACGTCGCCCTGAAAATAATTCG
AACCATAAACAGTTTTAAAAAGTTGAGAGGTTAAGTATGAAGCGTGAGAT
ATGATTTACACCTTAACCAATTCAGCCCTATCCTCGTGGTCCAAAGATTC
AAAAAATTGTCCAACAATTGTCTGAGCTCCTTGTAGAATTCTATGGCATG
AGTTTTGTTAATTTTACGTCATAAACTTTATGTCTTTTAGCCCGTAACTT
GAAAACTAGCCGAGGAAAGAATCATATCATCCCGTAAGGTTAGATTATCT
TTATGCTTAATCGTATGATAAAATTGATATTGTATGTACATATAAAAACA
TATCTAAGGATCAATGATGAAGGTCGTTCCAAAACGAAATGAAGCAGTTT
TTTATATTGGTCAAAAATAACGTTATTCTCGACAGACCTATTAACCCTAC
GCTAACActtttatgaaaagaatttaGATCGGTGATGAAGCACTTAAATA
TATAGTCCACTGGGCGTTTCGTTTGATTCTAGTAAACTATTACACATTCC
CCTGTGGCGTTAAGGTTAATAGTTGTATTATTAgcctgaaaaactttttt
gttttgttttggagaGATACGGAACCACATTTAATTTTATCATTGTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072130TCONS_00072130Clytia hemisphaericatranscript
TCONS_00072131TCONS_00072131Clytia hemisphaericatranscript
TCONS_00072132TCONS_00072132Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072131-proteinTCONS_00072131-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:849100..856698 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16	0.09	0.61	0.68	0.06	0.1	0.14	0.16	0.11	0.13	0.06	0.05	10.31	8.81	3.96	2.59	2.65	3.71	16.01	19.43	11.52	10.9	3.13	5.19	4.11	5.79	1.66	0.45	0.16	0.2