TCONS_00072131-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072131-protein
Unique NameTCONS_00072131-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072131-protein ID=TCONS_00072131-protein|Name=TCONS_00072131-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MEKLKIACVFLHLIVTLTLALEQNGAVYREEITNATVVNKTEFHTDTVNH
KLHCLMRPYSVCFIVEVTETVPDKEYQCRFYVGKFVSVETAPGLATIYES
YAACSTHLCQDLQGPTHDTDGVYAIKLGGSPIKVWCDMTQNDGGWTTIQR
RIDGSVNFERLWQDYKVGFGEASGNYWLGNDHLHHITDHYQNVLVRIKVL
APDGDRAEIIQENFYVADEANWYRVRTGTFVSGHSGLKNDWNYHNNVGFT
TTDVDNDNSNENCAERNRGGFWYTGCVRFNANGIYGRNDNKGIISRSFKA
LVSMKEVSIAVKRKD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044795XLOC_044795Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072131TCONS_00072131Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 103..314
e-value: 2.9E-40
score: 149.8
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 109..311
e-value: 8.8E-46
score: 156.4
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 95..315
score: 38.568
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 109..296
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 34..247
e-value: 1.5E-44
score: 151.7
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 248..306
e-value: 6.7E-15
score: 54.5

Blast
[Close]
BLAST of TCONS_00072131-protein vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.820e-37
Identity = 76/178 (42.70%), Postives = 104/178 (58.43%), Query Frame = 0 
Query:  109 CQDLQGPTHDTDGVYAIKLGG-SPIKVWCDMTQNDGGWTTIQRRIDGSVNFERLWQDYKVGFGEASGNYWLGNDHLHHITDHYQNVLVRIKVLAPDGDRAEIIQENFYVADEANWYRVRTGTFVSGHSGLKNDWNYHNNVGFTTTDVDNDNSNENCAERNRGGFWYTGCVRFNANGIY 285
            C+DL    +   G + I L    P+ V CDM  + GGWT  QRR+DGSV+F R W  YK GFG   G +WLGND++H +T    + L R+ ++  +G+      ++F VADEA  Y++  G FV G +G  N    HNN  F+T D DND S+ NCAE+ +G +WY  C   N NG+Y
Sbjct:  118 CKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSEL-RVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGGSAG--NSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLY 292
The following BLAST results are available for this feature:
BLAST of TCONS_00072131-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN11.820e-3742.70Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2[more]
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