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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072131 ID=TCONS_00072131|Name=TCONS_00072131|organism=Clytia hemisphaerica|type=transcript|length=2501bp
TTTGAATATTCTACATTTTGTTTTCCACTTGCTGTTGGCAAAACTTTTAC
ATTAGAAGATGGAAAAAGAAAAGCTTGAGAGTTTTGACGAAATGGAATAA
CCAAAAATAGCAACAGCCACAACGTCATCATGGAGAAACTTAAAATAGCT
TGTGTATTTTTACATCTCATTGTAACTTTAACTTTAGCATTAGAGCAAAA
TGGGGCGGTTTATAGAGAAGAAATTACAAACGCTACAGTCGTCAACAAAA
CAGAGTTTCATACAGACACGGTCAACCATAAGCTTCATTGCCTTATGAGA
CCATATAGTGTTTGTTTCATTGTGGAAGTTACTGAAACAGTGCCTGACAA
AGAATACCAATGTCGTTTCTACGTCGGAAAATTTGTGAGTGTTGAAACAG
CGCCTGGGCTAGCAACCATCTATGAATCATATGCTGCTTGCTCGACTCAT
CTATGTCAAGACCTACAGGGACCTACACATGATACAGACGGTGTCTATGC
TATAAAGTTAGGTGGGAGCCCGATCAAGGTTTGGTGTGACATGACTCAGA
ATGATGGTGGATGGACGACCATACAACGTCGCATTGATGGTTCGGTCAAT
TTCGAAAGATTGTGGCAAGACTATAAAGTTGGATTTGGAGAAGCTTCAGG
GAATTATTGGTTAGGTAACGACCATCTTCATCATATCACTGACCACTACC
AAAATGTTTTGGTTCGTATTAAAGTCTTGGCGCCTGATGGAGACAGAGCT
GAAATCATCCAGGAGAATTTTTATGTTGCTGATGAAGCGAATTGGTACAG
AGTTCGAACTGGGACATTCGTTTCAGGACATAGTGGTTTGAAAAATGATT
GGAACTACCATAATAATGTTGGCTTCACTACAACAGACGTGGATAATGAT
AACAGCAATGAAAATTGTGCAGAAAGGAATCGAGGTGGATTTTGGTATAC
TGGATGTGTCCGCTTTAATGCTAATGGAATATATGGTCGCAATGATAACA
AGGGAATTATCTCCAGATCTTTCAAAGCCCTGGTGTCAATGAAGGAAGTC
TCTATTGCCGTCAAAAGGAAAGACTGAAAGGTGGACATCATTTGAAATGG
ATCATATTCAATTGGAATGATTATAATCGGGtttaaacaaattttattcA
CGAAATTTGGGACgaaatggagtttttacaagctcttatttgatttggtt
ggtcgttaaccagtaataaaacaattatcTTTGTCACTTTTTCTAAacaa
cgcgtcatttttattactttaaacatgaccaattattaaagtatcttata
aaaactccatcttatctaagaaatttcgaaaagctcgtttttgtattatt
ttgtAAAAGAGAAAAACTTTGGATATTCACTGAAAATGTATCAGAGCTTG
agaccacgttcacacgctacggttccgtttcgctccgaaacgaaacgaag
CCAATCTTTTGGttaaattcaagttttacgtcacttctaaccaatagaat
ggcttcatttcgtttcggggCGAAACGGTGCCgttacgtgcgaacatggt
cacGTGGCTAGAAAATAAGCTCCAGTTATGTGTTGTAGATAAACATTCCG
CgataagaaaaaaaagaacagcTATCCTTCTGAGGATATTCAAATGGAGA
GGCGTGAGTTCCTTGGATGGCATTGAACGAATCAGCAGCACTGACTTTCA
ATTTTTAGAAGAGAAANTCAAATGGAGAGACGTGAGTTCCTTGGATGGTA
TTGAACGAATCAGCAGCACTGACTTTCAATTTTTAGAAGAGAAAgaataa
atcttgaaaaaaaatgaatatgctctgAAGTAATAACTCATACCTTGCCG
CCTTTGATGCCGTGAGGTCCACGTTCACCAACGTCGCCCTGAAAATAATT
CGAACCATAAACAGTTTTAAAAAGTTGAGAGGTTAAGTATGAAGCGTGAG
ATATGATTTACACCTTAACCAATTCAGCCCTATCCTCGTGGTCCAAAGAT
TCAAAAAATTGTCCAACAATTGTCTGAGCTCCTTGTAGAATTCTATGGCA
TGAGTTTTGTTAATTTTACGTCATAAACTTTATGTCTTTTAGCCCGTAAC
TTGAAAACTAGCCGAGGAAAGAATCATATCATCCCGTAAGGTTAGATTAT
CTTTATGCTTAATCGTATGATAAAATTGATATTGTATGTACATATAAAAA
CATATCTAAGGATCAATGATGAAGGTCGTTCCAAAACGAAATGAAGCAGT
TTTTTATATTGGTCAAAAATAACGTTATTCTCGACAGACCTATTAACCCT
ACGCTAACActtttatgaaaagaatttaGATCGGTGATGAAGCACTTAAA
TATATAGTCCACTGGGCGTTTCGTTTGATTCTAGTAAACTATTACACATT
CCCCTGTGGCGTTAAGGTTAATAGTTGTATTATTAgcctgaaaaactttt
ttgttttgttttggagaGATACGGAACCACATTTAATTTTATCATTGTAT
A Run BLAST on NCBI protein sequence of TCONS_00072131-protein >TCONS_00072131-protein ID=TCONS_00072131-protein|Name=TCONS_00072131-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MEKLKIACVFLHLIVTLTLALEQNGAVYREEITNATVVNKTEFHTDTVNH
KLHCLMRPYSVCFIVEVTETVPDKEYQCRFYVGKFVSVETAPGLATIYES
YAACSTHLCQDLQGPTHDTDGVYAIKLGGSPIKVWCDMTQNDGGWTTIQR
RIDGSVNFERLWQDYKVGFGEASGNYWLGNDHLHHITDHYQNVLVRIKVL
APDGDRAEIIQENFYVADEANWYRVRTGTFVSGHSGLKNDWNYHNNVGFT
TTDVDNDNSNENCAERNRGGFWYTGCVRFNANGIYGRNDNKGIISRSFKA
LVSMKEVSIAVKRKD Run BLAST on NCBI transcript from alignment at scaffold_71:849100..856698+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072131 ID=TCONS_00072131|Name=TCONS_00072131|organism=Clytia hemisphaerica|type=transcript|length=7599bp|location=Sequence derived from alignment at scaffold_71:849100..856698+ (Clytia hemisphaerica)
TTTGAATATTCTACATTTTGTTTTCCACTTGCTGTTGGCAAAACTTTTAC
ATTAGAAGATGGAAAAAGAAAAGCTTGAGAGTTTTGACGAAATGGAATAA
CCAAAAATAGCAACAGCCACAACGTCATCATGGAGAAACTTAAAATAGCT
TGTGTATTTTTACATCTCATTGTAACTTTAACTTTAGCATTAGAGCAAAA
TGGGGCGGTTTATAGAGAAGAAATTACAAACGCTACAGTCGTCAACAAAA
CAGAGTTTCATACAGACACGGTCAACCATAAGCTTCATTGCCTTATGAGA
CCATATAGTGTTTGTTTCATTGTGGAAGTTACTGAAACAGTGCCTGACAA
AGAATACCAATGTCGTTTCTACGTCGGAAAATTTGTGAGTGTTGAAACAG
CGCCTGGGCTAGCAACCATCTATGAATCATATGCTGCTTGCTCGACTCAT
CTATGTCAAGACCTACAGGGACCTACACATGATACAGACGGTGTCTATGC
TATAAAGTTAGGTGGGAGCCCGATCAAGGTTTGGTGTGACATGACTCAGA
ATGATGGTGGATGGACGACCATACAACGTCGCATTGATGGTTCGGTCAAT
TTCGAAAGATTGTGGCAAGACTATAAAGTTGGATTTGGAGAAGCTTCAGG
GAATTATTGGTTAGGTAACGACCATCTTCATCATATCACTGACCACTACC
AAAATGTTTTGGTTCGTATTAAAGTCTTGGCGCCTGATGGAGACAGAGCT
GAAATCATCCAGGAGAATTTTTATGTTGCTGATGAAGCGAATTGGTACAG
AGTTCGAACTGGGACATTCGTTTCAGGACATAGTGGTTTGAAAAATGATT
GGAACTACCATAATAATGTTGGCTTCACTACAACGTAAGCTATTTCAAAT
TTCGTTCATAGTGGTAAAGGTTTGCCGAAGTCGAACCGAAAATATCTAAC
CCAACGAAGTTAGGAGGGGATGCCATAAATATTTCACATAAATATTCCCA
CTTCTTAAAAACAAAGATAATTTTCCCTTAAAATCGCTAGTTTAGGATCG
ATAGATGTATAGTTtcgcaagctagacgactaaatTTAATAGAGAAGGTA
AAATGATGGTAAGGAAAACCTAGAGGACAATATTATACAAACTAACATTA
TCACATATTAATTATCGCATTATCATAAAACATCTAAATATTCaaaaggt
aaaatataaatatactagccggtacccggcgtcgcacgccggtttagctg
tttgctgaacgcatttaaagtcctttgagatgttgggaagatggcttaaa
cacgatgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagattttttt
tctcgcttcgctcgcgttatatttgccgtagttcttgatgtttaggaaaa
ctttgatgtcaagataagcggagtgaaataatagacatgacacccTATTC
TTCGAAAAGAGGCAGCCCGGGGGAGGggatacttaggcaagagaagggta
taggtatgtgccggccttaagtgtgcctttttgaaacatggcagtttgaa
aaatcggaaaataaaacttcagtcccactgaatcttttttgcccccagaa
agatagaaatttggtcaaattagttccaaaaagtgaattaaaattcacac
aatttcccttgtttcttctcctctttattctgctaagggtccgaggggca
gggccaaaagtcagctcgcaaccatagtcccccggaaggcagctaggaca
cgcagacaaaaaagcgtgatagatagcgcaattttatattgtttttttat
aaaataacttcgtcataacttcaataatctttcaaattcaacaatgactt
agatttacagcaaaatgattatcgacatacatgtttaaaggtccgttttt
acgaagaaagaattctagtttttgcCGCCTTTTTACCGCCTTTTACCGCC
TACCgcatttttaatgttgctgttgttctaacaaacttgttatgtgattc
ttgtgttttattttatatttgttcttttctttaacagattctgtttaaaa
aatttcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcaaaacaaagt
ctttataaaacggcgcgaatatcgttaaacaaatttgtggagcaagaaca
aaataaaagtcatcttttaaaagaacaaaacattgctttcgaaaacgaaa
gtgacacacaaaaaacaaaccaacaaagaaacacacatacagactacggc
tattaatatatagatgaatATACATCACCGAAGGCTAATAAATCCAATAG
CAAACGAAATCCTAATgaatatgttttattatatgccCAGAGacgaaaac
aaaacataaatacTCTATTTTGTAGAGAGATTCACATAAAAAGCTCACAC
AAAGcgaacattcgaatgtttttcctTCTAATTGTTTTTTAATGACTTAT
ATTCACGAAACTTACAATTGAACTATTATGACTTTCtttaacaacaacaa
aataaaagtaacaaaaagtcaattttcgaaTGCAAAATTATATATGCCCT
TTAATTATTCTTCTCAATTTTCAACAGAAGTAGCCTGAAATGTGATCTTT
GTTtgaacgaaaaatttgaaatctcttTGCGTAAAGACAATTTACTGAAC
TGTAGATCTGAACTTATCTCAAAATGCCGGCACATAAACAAACACTTACT
CGAAAACTTCGATTCTAAtgattgacgtcaattttaatACATAGTAGgtt
tcgttggttattggattcaCATTAACCTTCGATGATCCTGAAATTGTACT
ATCGGCTTCCCCTCGGCTTTACCTATTGATATCTGCTTATTATCCTAGTT
AGCTCCAGTTTAAACGTATATTATCTCCGGCTTtcggaaaaattcaaaat
tgacctTGCCTTTACAGCAAATTTGATTGAGCTGACCTTAAATTCTTAAT
TTCAGAGACGTGGATAATGATAACAGCGATGAAAATTGTGCAGAAAGGAA
TCGAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAATGGAA
TATATGGTCGCAATGATAATAAGGGAATTATCTCCAGATCTTTCAAAACC
CTGGTGTCAATGAAGGAAGTCTCTACTGCCGTCAAAAGGAAAGACTGAAA
GGTGGACATCATTTGAAATGGATCATATTCAATTGGAATGATTATAATCG
GGTTTAAACAGTCTGATTTGAGCCAGAGAGCCAACCCAGGTTTGGGCATT
GAAGGTTGACTCGCGGCCtcgaaaattcgagaaaatcaaaaaaataaaac
cccTAGAGAGTCACAAGGATCAATTATACAAAACGTTAAGCCAAATCGGA
CTATTTCTGAAGTTACCAGCCTAACAAAAGATTTTAATCTCGCTTTGGCG
CGAAACTCGTCACCATTCGTCACCATACCCcgacattctttttttatgat
taaaaaacAGCTAATTTATCTATTCAGTAGATCCCTAGAAACTAAAACTA
TAGTTACAGGTAATGTTATTGAAATCAATAATTAATCATATAAAACCAAT
TCAGGATTAAAATGCATTATGGGTAATtttttcccttcaaaatgaCAAAT
GGATTCaagtactttttaaaaatgaatatCAAAACtgacattttgaatat
ttatttagaAAGATTTCTAAATTCCCCATTATGATACGATattacaaaat
ttttttccaaacaaaaataATGTACAACAAATTTGAATATTCTACATTTT
GTTTTCCACTTGCTGTGGGCAAAACTTCTACATTGGAAGATGGAAATAGA
AAAGCTTGAGAGTTTTGACGAAATGGAATAACCAAGAACAACAGCCACAA
ACATCGCATCATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCA
TTGTAACTTTAACTTTAGCATTAGAGCAAAATGGAGCAGTTTATAGAGAA
GAAATTACAAACGCTACAGTCATCAACAAAACAGAGTTTCATACAGACAC
AGTCAACCATAAGCTTCATTGCCTTATAAGACCATATAGTTTTTGTTTCA
TTGTGGAAGTTACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTC
TACGTCGGAAAATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCAT
CTATGAATCATATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGG
GACCTACACATGATACAGACGGTGTTTATACTATACAGTTAGGTGGGAGC
CCGATCAAGGTTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGAC
CATACAACGTCGCATTGATGGTTCGGTCGATTTCCAAAGATTGTGGCAAG
ACTATAAAGTTGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAAC
GACCATCTTCATCATATCACTGACCACTACCAAAATGTTCTGGTTCGTAT
TAAAGTCTTGGCACCTGATGGAGACAGAGCTGAAATCATCTCAGAGAATT
TTTTTGTTGCTGACGCAGCGAATTGGTACAGGGTTCGAACTGGGACATTC
GTTTCAGGACATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGT
TGGCTTCACTACAACGTAAGCTATTTCAAATTTCGTTCATAGTGGTAAAG
GTTTGCCGAAGTCGAACCGAAACTATCTAACCCAACGAAGTTAGGAGGGG
ATGCCATAAATATTTCACATAAATATTCCCACTTCTTAAAAACAGATATA
ATTTTCCCTTAAAATCGCTAGTTTAGGATCGATAGATGTATAGTTtcgca
agctagacgactaaatTTAATAGAGAAGGTAAAATGATGGTAAGGAAAAC
CTAGAGGACAATATTATACAAACTAACATTATCACATATTAGTTATCGCA
TTATCATAAAACATCTaaatattcaataggtaaaataTAATTATATGAAT
ATACATCACCGAAGGCTAATAAATCCAATAGCCAACGAAATCCTAATgaa
tatgttttattatatgccCAGAGacgaaaacaaaacataaatgCTCTATT
TTGTAGAGAGATTCACATAAAACGCTCACACAAAGCgaacattcgaattt
ttttccttctaaTTGTTTTTTAATGACTTATGTTCACGAAACTTACAATT
GAACTATTATGACTTTCtttaacaacaacaaaataaaagtaacaaaaagt
caattttcgaaTGCAAAATTATATATGCCCTTTAATTATTCTTCTCAATT
TTCAACAGAAGTAGCCTGAAATGTGATCTTTGTTtgaacgaaaaatttga
aatctcttTGCGTATAGACAATTTACTGAACTCTAGATCTGAACTTATCT
CAAAATACCGGCACATAAACAAACACTTGCTCGAAAACTTCGATTCTAAT
GATTGACGTTAATTTTAATACATATATAGgtttcgttggttattggattc
aTTAACCTTCGATGATCCTGAAATTGTACTCTCGGCTTCCCCTCGGTTTT
ACCTATTGATATCTGCTTATTATCCTTAACTTCAGTTTAAAAGTATATTA
TTTCCGGcttttggaaaaattcaaaattgacctTGCCTTTACAGCAAATT
TGATTGAGCTGACCTTAAATTCTTAATTTCAGAGACGTGGATAATGATAA
CAGCAATGAAAATTGTGCAGAAAGGAATCGAGGTGGATTTTGGTATACTG
GATGTGTCCGCTTTAATGCTAATGGAATATATGGTCGCAATGATAACAAG
GGAATTATCTCCAGATCTTTCAAAGCCCTGGTGTCAATGAAGGAAGTCTC
TATTGCCGTCAAAAGGAAAGACTGAAAGGTGGACATCATTTGAAATGGAT
CATATTCAATTGGAATGATTATAATCGGGtttaaacaaattttattcACG
AAATTTGGGACgaaatggagtttttacaagctcttatttgatttggttgg
tcgttaaccagtaataaaacaattatcTTTGTCACTTTTTCTAAacaacg
cgtcatttttattactttaaacatgaccaattattaaagtatcttataaa
aactccatcttatctaagaaatttcgaaaagctcgtttttgtattatttt
gtAAAAGAGAAAAACTTTGGATATTCACTGAAAATGTATCAGAGCTTGag
accacgttcacacgctacggttccgtttcgctccgaaacgaaacgaagCC
AATCTTTTGGttaaattcaagttttacgtcacttctaaccaatagaatgg
cttcatttcgtttcggggCGAAACGGTGCCgttacgtgcgaacatggtca
cGTGGCTAGAAAATAAGCTCCAGTTATGTGTTGTAGATAAACATTCCGCg
ataagaaaaaaaagaacagcTATCCTTCTGAGGATATTCAAATGGAGAGG
CGTGAGTTCCTTGGATGGCATTGAACGAATCAGCAGCACTGACTTTCAAT
TTTTAGAAGAGAAANTCAAATGGAGAGACGTGAGTTCCTTGGATGGTATT
GAACGAATCAGCAGCACTGACTTTCAATTTTTAGAAGAGAAAgaataaat
cttgaaaaaaaatgaatatgctctgAAGTAATAACTCATACCTTGCCGCC
TTTGATGCCGTGAGGTCCACGTTCACCAACGTCGCCCTGAAAATAATTCG
AACCATAAACAGTTTTAAAAAGTTGAGAGGTTAAGTATGAAGCGTGAGAT
ATGATTTACACCTTAACCAATTCAGCCCTATCCTCGTGGTCCAAAGATTC
AAAAAATTGTCCAACAATTGTCTGAGCTCCTTGTAGAATTCTATGGCATG
AGTTTTGTTAATTTTACGTCATAAACTTTATGTCTTTTAGCCCGTAACTT
GAAAACTAGCCGAGGAAAGAATCATATCATCCCGTAAGGTTAGATTATCT
TTATGCTTAATCGTATGATAAAATTGATATTGTATGTACATATAAAAACA
TATCTAAGGATCAATGATGAAGGTCGTTCCAAAACGAAATGAAGCAGTTT
TTTATATTGGTCAAAAATAACGTTATTCTCGACAGACCTATTAACCCTAC
GCTAACActtttatgaaaagaatttaGATCGGTGATGAAGCACTTAAATA
TATAGTCCACTGGGCGTTTCGTTTGATTCTAGTAAACTATTACACATTCC
CCTGTGGCGTTAAGGTTAATAGTTGTATTATTAgcctgaaaaactttttt
gttttgttttggagaGATACGGAACCACATTTAATTTTATCATTGTATA Coding sequence (CDS) from alignment at scaffold_71:849100..856698+ >TCONS_00072131 ID=TCONS_00072131|Name=TCONS_00072131|organism=Clytia hemisphaerica|type=CDS|length=1896bp|location=Sequence derived from alignment at scaffold_71:849100..856698+ (Clytia hemisphaerica)
ATGGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCATTGTAACTTT
AACTTTAGCATTAGAGCAAAATGGGGCGGTTTATAGAGAAGAAATTACAA
ACGCTACAGTCGTCAACAAAACAGAGTTTCATACAGACACGGTCAACCAT
AAGCTTCATTGCCTTATGAGACCATATAGTGTTTGTTTCATTGTGGAAGT
TACTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTCTACGTCGGAA
AATTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCATCTATGAATCA
TATGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGGGACCTACACA
TGATACAGACGGTGTCTATGCTATAAAGTTAGGTGGGAGCCCGATCAAGG
TTTGGTGTGACATGACTCAGAATGATGGTGGATGGACGACCATACAACGT
CGCATTGATGGTTCGGTCAATTTCGAAAGATTGTGGCAAGACTATAAAGT
TGGATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAACGACCATCTTC
ATCATATCACTGACCACTACCAAAATGTTTTGGTTCGTATTAAAGTCTTG
GCGCCTGATGGAGACAGAGCTGAAATCATCCAGGAGAATTTTTATGTTGC
TGATGAAGCGAATTGGTACAGAGTTCGAACTGGGACATTCGTTTCAGGAC
ATAGTGGTTTGAAAAATGATTGGAACTACCATAATAATGTTGGCTTCACT
ACAACAGACGTGGATAATGATAACAGCAATGAAAATTGTGCAGAAAGGAA
TCGAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAATGGAA
TATATGGTCGCAATGATAACAAGGGAATTATCTCCAGATCTTTCAAAGCC
CTGGTGTCAATGAAGGAAGTCTCTATTGCCGTCAAAAGGAAAGACTGAAT
GGAGAAACTTAAAATAGCTTGTGTATTTTTACATCTCATTGTAACTTTAA
CTTTAGCATTAGAGCAAAATGGGGCGGTTTATAGAGAAGAAATTACAAAC
GCTACAGTCGTCAACAAAACAGAGTTTCATACAGACACGGTCAACCATAA
GCTTCATTGCCTTATGAGACCATATAGTGTTTGTTTCATTGTGGAAGTTA
CTGAAACAGTGCCTGACAAAGAATACCAATGTCGTTTCTACGTCGGAAAA
TTTGTGAGTGTTGAAACAGCGCCTGGGCTAGCAACCATCTATGAATCATA
TGCTGCTTGCTCGACTCATCTATGTCAAGACCTACAGGGACCTACACATG
ATACAGACGGTGTCTATGCTATAAAGTTAGGTGGGAGCCCGATCAAGGTT
TGGTGTGACATGACTCAGAATGATGGTGGATGGACGACCATACAACGTCG
CATTGATGGTTCGGTCAATTTCGAAAGATTGTGGCAAGACTATAAAGTTG
GATTTGGAGAAGCTTCAGGGAATTATTGGTTAGGTAACGACCATCTTCAT
CATATCACTGACCACTACCAAAATGTTTTGGTTCGTATTAAAGTCTTGGC
GCCTGATGGAGACAGAGCTGAAATCATCCAGGAGAATTTTTATGTTGCTG
ATGAAGCGAATTGGTACAGAGTTCGAACTGGGACATTCGTTTCAGGACAT
AGTGGTTTGAAAAATGATTGGAACTACCATAATAATGTTGGCTTCACTAC
AACAGACGTGGATAATGATAACAGCAATGAAAATTGTGCAGAAAGGAATC
GAGGTGGATTTTGGTATACTGGATGTGTCCGCTTTAATGCTAATGGAATA
TATGGTCGCAATGATAACAAGGGAATTATCTCCAGATCTTTCAAAGCCCT
GGTGTCAATGAAGGAAGTCTCTATTGCCGTCAAAAGGAAAGACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072131-exon-scaffold_71-1491911889:849100..849983 | TCONS_00072131-exon-scaffold_71-1491911889:849100..849983 | Clytia hemisphaerica | exon |
| TCONS_00072131-exon-scaffold_71-1510915933:849100..849983 | TCONS_00072131-exon-scaffold_71-1510915933:849100..849983 | Clytia hemisphaerica | exon |
| TCONS_00072131-exon-scaffold_71-1575043694:849100..849983 | TCONS_00072131-exon-scaffold_71-1575043694:849100..849983 | Clytia hemisphaerica | exon |
| TCONS_00072131-exon-scaffold_71-1491911889:855082..856698 | TCONS_00072131-exon-scaffold_71-1491911889:855082..856698 | Clytia hemisphaerica | exon |
| TCONS_00072131-exon-scaffold_71-1510915933:855082..856698 | TCONS_00072131-exon-scaffold_71-1510915933:855082..856698 | Clytia hemisphaerica | exon |
| TCONS_00072131-exon-scaffold_71-1575043694:855082..856698 | TCONS_00072131-exon-scaffold_71-1575043694:855082..856698 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_71 | supercontig | scaffold_71:849100..856698 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00072131 vs. Swiss-Prot (Human)
Match: FCN1 (Ficolin-1 OS=Homo sapiens GN=FCN1 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.793e-34 Identity = 76/178 (42.70%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 454 CQDLQGPTHDTDGVYAIKLGG-SPIKVWCDMTQNDGGWTTIQRRIDGSVNFERLWQDYKVGFGEASGNYWLGNDHLHHITDHYQNVLVRIKVLAPDGDRAEIIQENFYVADEANWYRVRTGTFVSGHSGLKNDWNYHNNVGFTTTDVDNDNSNENCAERNRGGFWYTGCVRFNANGIY 984
C+DL + G + I L P+ V CDM + GGWT QRR+DGSV+F R W YK GFG G +WLGND++H +T + L R+ ++ +G+ ++F VADEA Y++ G FV G +G N HNN F+T D DND S+ NCAE+ +G +WY C N NG+Y
Sbjct: 118 CKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYKQGFGSQLGEFWLGNDNIHALTAQGSSEL-RVDLVDFEGNHQFAKYKSFKVADEAEKYKLVLGAFVGGSAG--NSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLY 292
The following BLAST results are available for this feature:
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