XLOC_044789 (gene) - C. hemisphaerica

Overview
NameXLOC_044789
Unique NameXLOC_044789
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_71:397350..408087+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044789 ID=XLOC_044789|Name=XLOC_044789|organism=Clytia hemisphaerica|type=gene|length=10738bp|location=Sequence derived from alignment at scaffold_71:397350..408087+ (Clytia hemisphaerica)
GTGGACCACTTATATTGAGTCGCTGGGTCCGCTTGCTGACTTGAACGTGG CACCGAGGCGAGAGTTCAAAAATTTCACCACTGACCTCACNTTGCTGACT TGAACGTGGCACCGAGGCGAGAGTTCAAAAATTTCACCACTGACCTCACA GCTCATTTAGTCCAggaatttttagatattttttagCTGCCTGTGTGCAG TGGAAGTATTGGAAAGATGCTGCCAATAACAGACTATCAGAGTAAGCTTA GAATTATTTTCCTagctattttttttatataatttaatGATCTATTATTT TCTCTCCTACTACTCAATCAAACCAGACGTCTTCTGCGCTTGATAGGATC GATCATGGGAacggattacttaacgatccagataggagatcgatagagga tcgaaactcaagatttttttaagcttatgattagttatcgattatttatc gatctatcgtcgatcttttatcgatcttcagtcaggcacatcctggcaaa tgaacggggtgagcatttgcatggggtattcgtcacccagtgcaaatgag ataggacgtctcaggctaaaagcgtgaaaatgaataaaaatgaacttcaa actgaaaacgggaaaaaaggaagaaaaccgggaactttattttttcgtta aaagtttcttcaatcttcgaagacaaaattgaccgatggaaaaaaaattt catctatgcagttcttcaaaatgaagcaaaatatttccaacccagttcaa ttgcgtggggtatcagttacatcaatatgccttcttacctgtctttaaaa atataaataaaagtaatcacggaaaaggacgcgaaaaaaaaagacatNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNggtgtagcgaaaggatacttttgccaccggacaaatacaccg gacagtccggtgcatCAGCAGGGTCCTTATCGACCCTATTGactcataca cgtttttttttttataagaacatcctaaatatttgaagccttcggatgtt cttaactttttgagttttaagccttaaaatgttcttaagatgttcttaat ttttcttgatttgtaaGTCTTAAAAAATTGCTCACAGGAGACCTGACTGG TCAGCTGGCTTCAAAAAATTATCGAATTACACCAATTAGCCTTAAACTAA CAGCAGTAGGTGTCTATGTAATTatgtaaaaaaggaaaaacatgaCACCT TTTGACTTTCTTGCGCTTTGTGATTCATAATCGACCTAATTTGTTGATTA TATCATTACAACATTTGTCATCATGGACAAACGctaaacaaaatttttag tacaaataaaatgattggaaaagaaaagagaaatctTGAAGTGCAACCAC ACCTGAAACACATGTTTTGTTTGAATTCTATGCATTTATATGAAATCCAG CTTACAGTATCAGTATACTGTTTTCGAAAGTTTCACTCAACTCGCAAGTA TGTCAAGGAAACAAAAAGCAACTCAAATGACTCTGGGAGCGTTTAATTTT ACGAAGAAAGTCAAACATAATGATTTACTTCTTAACATCGCCATTCCTAG GACAGTTGtcgaaaaagaaattatcaaaaGATTTCCATGCGCTTATTGCC CGGAgaaatttttagagaaaaaaggACAAGTAGTTCATGAGCAATTTTGC AAAGATAAAGACCATGAAAAGTGAGTTACATAATAcatattctttttctt ttatgaatatATACAGTATATACTTTTTAATACTGTACTGTATGCTAGTT ATGTATTCCTTTACAATATGTATCACTTCTGTACTGTAACCACAGTTCAT ATCAAACATGATCAAACAgatgagaaaaagattttatatTATGTACTGTA TAATTTTTAGAGCCCCCGGATTACAACCATCATCACCATCACCAACAACG CATTCAAATACCGAGACGACCAACGAAACAAATGATGTAGCATGTAATGA AACAGACGATGTCGTGGTTATTGGATCAATACCAAGTGAACCACATGAGA ACTCGAAAGACGATCAACCAAAGACCATGAGACGTGGAAAGGATCGCCGA GAAAAACATTCGATCATCAAGAAGTCGAACGTTATTGACGAAGTGGAGAT GGGAGAGTTATCAATAGAAGAAATAGCGCAAAGATACAGCATCAATCGTT CCATGGTAAGACGCGtttcatttcaaacaaaaactttggtCTTAATGGTA TTAAACCGTATACAGtactgtatgtatgtatgtatgtactGTACTGCGAG TCACACCTTACAGCAAACCTATCTcaaggtttttcttttttcgattTCTA GGTTTCGAAATGGATAAAGGACAAGGTCAAAATCAAAGAAGCATCAAAAA CCGCCCACCGTCTTACATTCAAAATACGTCCCTCAGTGAAATACAAAACA ATGTATACGGCTCTCCTCGCGAAATTCAAGACTGCACGTGAAAAGGGCTA TTGTGTCAATTTCGGCTGGTTATGGTCTAAAGCTCGTCAAATTTACAAGG AGCAAGAAGGTGAAACTGCCATCGTTCGTAAGCATGTTATCACAACCTTT ATCAAAAGATATAACTTGAGAATGCGtgcaaaacaaagaaatcgGAAGAA GTCGAAAGAATCGTTTCGAGATGACCTATCAAAGTGGCATGGAACGATGC GTGAACGCCTAGTTAGGAGCGGAAAGGATGCCAGTTATGATCAAAAATAG GGTCGCTTTCTACCGACTCAAAGGTTCAACGTTGATCAAAGCCCTTTACC ATTCGCCATCAACACCAAACGTACATACGAGCTGGTTCAAAAAGGAGACC GTTACCATAAAGTATGGATATCGCAGCCAGGGAGTGGTCTTGAGAAAAGG CAATGCACCTTACAGGTTTGCTTTCGCCCAACAGGAAAACAACCCAAACT TGCCATCATTTTCCGTGGAAAAGGTAAAAGGATTAAGAAAGAGGAGAAAG AAGCGTGGCACAAGGACGTCGATGTCTACTTTCAGGAAAATGCATGGGCG GACACAGATTTCTCTGTTGCCTGGGCAAAGAAAACGCTTAAGCCGGAGGt cgagaaagaagaaagattcgCCCTGTTCTGCGATAATCTGACAGCACAAG TCTCTGACGAATTTAAAAAAGAGATTTCCAGTCAATCTGGTGTTTGCTGG TTTGGTCTTCCCAATGCCACTGATCTTTGGCAACCCGTAGATGCTGGGTA CGCGGAGCTGCTTAAAATATTCGTTCAACAAGTCCAGCATGAGTGGTTGG ACAATGAAGACAATGCCGAAAGATGGTATGGAAACGAATCAGGATTTTCA GCAAAGGACCGACGCATCCTTATCACCCTTTGGGCTGGAAATGCTTACCA AAAGCTCATATCCGAAGACTATGATGACTTCCGATGGCGTCTTTTTGAAA AGACAGGTTGTCTCATCACAGCAGATGGATCTGGAGATGACAAGATCGCA CCAGAGGGTCTACCGGATTACAAACCACCACCTCCACTTGATTACATCGA ACCGTCAACTGCTCCTCCTGTCTCAAATACCGCCGAGGCTGAAGTGCTTG AAATTGCTGATGATGCAGGAGAGAACAGTGACGAAGAAGGAGAAAGTCTC CCCGTTGAGGAGTTAATTGATGATCCGAAAGATAGAACGTACGATGACGA ACTTGTTGGCCGAAGCTTGAAAACACTGTACGAAAATGGCTGGTTCACTG GAAAAATCAAGTATTTTAACACTGGCATATGCCGCTATTTTGTCCAGTAC AAAGATAAAACAACAGACTTAATTGATATCGAAGATATAGATGGTGTGGA gatgattttgatttgaaaattgttgCTCCATACTGtacttttttgtaaat attctAGACCTTTTAGCTTTTTATTTATTAACATGTGTGactaaattgaa aaatgttcttcTCTCCATTATTCTTGTTTCTCCTAAGCCTCtgaatgttc ttagcatgttcttaacattttagtcatcgaagccttatgttcttatatac tatgttcttataaaaaaaaaacgtgtactcgaTTTatgatcgataacaaa tcgattaacgatcgatgacgaatcgattaacgatcgatgacgaatcgata tactcgattgaaatactagctcaataatggatcaacgaaggatcgatact CAAgactttttaatggctgaatcttccatcaaTCTCCTATCCgcatcgtt aagtaatccatcgatcacatatcgatccgtcatcgagccgttccgatgat caatcctatcgagcgcggacgtctggctCAAACTCGCCgacaaccaaaat aaaaacttaTCCATTCATACTGTCATAGACACTTTGTTAAGACATGTAAT GCTAAAACTAAAGCCTCATTTgcgtccggtggaaaaaattcAAGTATCAA AAAGTGACCAAATGGAGGAATCCAACTCAACTGGAACCTATATAAAACCA AAGTGGGAAAAACATACAGTGTGTTTTGTTTTCGATAAATAAACTCACTT TTTCTTTAACCTTTTTGACCCCGAATGCCGTAGATATACGTCCTtgatac cgtgagtggtcctaaatccgacagccctgcccaaatccgatggggtcttt taaagatacaaactaaaataaaagcaaacctttcgctgtgacgcaataaa gataccaaagtgtcaactaaactgagagatttgatacaaaTTGATTTGAA CCAAATTACAATAATTgtgcttcttataaaaaacataattttctatacat aaattgttaacgttttataaacacaagcaacagacagtcagtacctttag ccaaattaggaacatttttcttacttttactagtattcctaattaggaat attaGGTTTCtccaaaaatagcaaaaaatcgCACGTTAAAAAGTACTTCG TAAGATTCTTAccatgagattgggtaacttgcatcagtggaggctaacat gcatagtcctcaaatgaaagacctggctggtcattaaaatacaaaattaa atcaaaNCAtcattggaggctaacatgcatagccctcaaatgaaagactc agctggtcattaaaatacaaaaataaatcaaaacaaaaatggtagagtag agctgcgagcggagctgcgtagctgtattttaatgaccagccaggtcttt catttgagggctatgcatgttagcctccactgatgcaagttacccaatct cacggtaccatTCCATTTAGGTGGGAAAGAAAGACTGAGCTCTTGGCTTG CTCAGGGGACCGAGCTTCCTAGAAAAAACTTCACTCCTCCCAGCCTCTCC TCCCAGTAAATTGACATCTTATTTATAAAAAGCGGGAAACtcactttctg tttttcttcgtGATAATAAAAACGACAGTTCGTTTAATTCctaatttgga attatttttttggggCGTTAATAATTCCACCATCCgcgaaagaaattttt caattttttgcacagttatCATATTTGGTATACCAAATCTATTGGTCATA CTTGGAATTTGCGAATATAGCTCGTTTCAGAGatattaaacttttaaata tttcttcctaattaggaatcctggtaaaagtaagaaaaatgttcctaatt tggctaaaggtacTGACTGACAGATTTAGAATAATTATagatagaggtaa ttatttttacaacttacacttttttgatcacatttttgattgacatttat agccatcttgttagatgttttgttctgagagtccttgcaatagtttatcg ttcaacttggagaaggaatttttgtaaacatagaatttttttcataacag ttatttggagtgtcggaattaggcagggctgttggatttaggaccactca cggtacatTCTGAATGCCGTACATTATGCAATTTGATAGACACGTCTTTC TCGGGCCATATCTTTTATTTGCTTGCTTGGTAATCGTTCAAAATTGTGAG CAGTAGAATGTTTTTTGGATGCTAATTTTTGGTATATGGCTTCAGGAGTA AGTATATAATGAAAAAATACTAAAGAAAGATAATTAATAATTTTAAACTT TCCCCACTTCTTTTGCCTAAGAggtgaaaaataccaaaaaagtgACATTA TCGAAAAACGAGTAAAAAAACTTTGGTAAATGTGAAGCTACCATTTTAGT TAGAGTATTTTATTAGGAGAGTTACCCCACCTTAAAGCTGCAgaatttaa ttagcttttcagggatagctaattttttatcaaaagatttctagttcttg agttatgacaAAATAACCGAACATGtccattttgtcaaaaaatgttgCCA ACGtacatttttgagtttttcgaaaataaatttttttccagttgtggtcg gaaattctgatgaaaatcCATGAACATTTGCAAAATGCATTGAAAATTCC ACTCAGAGAATTTATAGAGTGACATATACAGCAGATACCTGTGAACAGGC TTCATGAGGTAGGCTTACTGTTATGATCACCATTCCTCCAGGAAGATACC ACACATTTGCCCatttctgacaaaaggaagtaactgacatttttatgaat tttcattttttttgcaaaaatgaagCCGATCTCAAAATGTTCATTGTTGC AGAGAAAAACAAGACCCTTGTTCTGTCAGTAAACCTCGaccaaaagaaat tgaataaaGAAGCAACTGACAGGTTTCTGGAGAatgttttctgacaaaaa gaagtaaatgactgttttgcttctttttgtcagaaaaagGTATCACTTAC TGCCTTTTGtcagaaatatttctttcttcaatttcttttggttGAGGTTT ACTGACAAAACAAGGGTCTTATTTTTCTCTGCATCAATGAACATTTTGAG AAAAGCAGTGATGCTATGAACTAATCTTCAATGAGTAGAACAATAATCAG TCATTTGTTTTTTGATATGTACCATCTGCATCCGATGCCAGCATAAAACG CGCTTTGTCAATTTTCTCAATTTCAACTTCATGTCAATTACTTCCTTTTG TCAGAAATGGGCAGAAGAATGGGTGCACCAACAGGAGGGTACACTGCGGT CTGGGTGCATGCCAGTCTGCTGCCTATTCATAACAAAACACTGCGCTTGC CTGTGCACACTCGCGTGGGCTACTTGTAAGGCCGGTGCATCATGACAATT TAGTCATAAGTCAATTGTTGATTCTTAAAGGTTGAatttttcatatcttt agtTCTCAAACAAAAGTGGGAATTCGATGCAAGCTTTATGGATTTTTCAT CAGCAAACCATTATATAACTTTTGATGGGAAAACATTCAAGATGTGTTTT TTAATATATACATCAAAATTGATGTGAATTATGCTCTTTATGCTGTTGCT TACTTTTGCTATGGCAACAAGTGATGACATTTTACCGATTACTATGCTAA ATTTAGAAATGTCTTAGTCAAAGAAATGATTTTACATTATAACTCTATTG TAATTTGAAGTATCATTGGAAGAATAatgtatttgtttttcttttagagA TTGGAATCGGCGTCACAGGATTTGGTATGCTATTCCTTTTCCTTGGAATG CTTTTGTTCTTTGATCGTGGTTTGTTGGCAATAGGAAATGTAAGTCTTTC ATTTATGAAATTTCAGTCTGAATCTATGAATCAAAATCAAATATAGCAAA AAACAGAAATATTCTTGTGCAACCCTTTATGTTCTTGTTAAATTTGTTTG ATTGAAATTCTTTATTACTAATGTATTTGATCATTTTCTGAGAAGGTGGG ATAAAACAGGAATAAATAAGAATGATAGTACAAATTTGATTCAATCTGAA TATGAAATGATATAAGTGGCTTACTTTTATGCCACTTATTTGTAAAATGT TCTAAACCTAGGTAACAGCTGAATGAAAATGTTGTATCTACTAAAAGGGA AACCACGTTCGTTAAAAACTTCGATTACAGCAACCATTTACATTGATTTT TACTAAATGCTTGATTGCTATTACCAAGTAACAATACCAAGTTATGATAA TAAGAATGAAATGTTTTGAAGTGTACACTTTTTATcactctttttcaaaa tatgttttatttttatagatCCTTTTCATATCTGGTTTAGCATTGGTGAT TGGCCTTGAAAGAACATTCAGATTCTTTTTCCAAGTAGAAAAATTGCGCG GAACAGCCTTCTTCCTTGGTGGAATATGTATTGTGTTGTTAGGGTGGCCC TTTGTAGGAATGATTGTTGAAATTTATGGTTTCGTTCAattgttcaagta agaaacgTTTTATTTCGTTTTTACTGTAGTACAGTATTGTTCTTTCTACC CAAAGAACTGCTTTAATAACTTTCGCCCAGTTTTTTAAGGGGACTTATTT CTTTTACAATATTCTGACATTTCAATTATGTTTTACGTTCTTCTTTTCAG AGGATTCTTTCCAGTTGTTATAAATTTCCTTCGGCGAGTTCCAGTTCTAG GGAATCTCCTACTTTTACCAGGAATTAGCACTGTAAGTAACTTTAGCCAA TGATTTTAGAGAAGAACTTTCGTCCATTTTAAATCAACTCAAAATTAGCA TTTTGTNTACCAGGAATTAGCACTGTAAGTAACTTTAGCCAATGATTTTA GAGAAGAACTTTCGTCCATTTTAAATCAACTCAAAATTAGCATTTTGTAT TGTGTATTTCATTATTATATGATCGCTTCAGCTAACAATGAGAGGTGCTG ATGATATCAATATATGTTGTTTTTCGCCTTGACCTAGTCTCCGAGTAGAA TCAAGCAAATGTATCACATCTGTTGATTCATACTAATCTGGAGtttatat tctttcttttcAGTTTGTCAATTACATTGCGAACGATCCAAATAGCATGG TATGAGCTCTATATANATATTCTTTCTTTTCAGTTTGTCAATTACATTGC GAACGATCCAAATAGCATGGTATGAGCTCTATATAAACTCTTTTCTCAAC TTCTAATCTCATCTTCGTAATAATAacgaccaaaacaaaccaacgaTCAG ACAATGACGACACAATGACGTTATAGCGACTATGTAACCAACTGCATTGT TTTGTTTCCGTATTAGAATGCAGAGAAATCTATGCGGTAGGGATGTTTGT TGTGTTGGTGGATTACTAGATTCGTGATTGGCTCATCGAAAGACCTATGT AATGAAGTGTAGCTGAAGACTAGAATTGATTTTCCTATATAGATTTTGAA GCCACTAATTTCCCACCTAAGTTGCGCAGTCCGcctggttttcacacaaa cgcttggttgaaataaacattttaacaacaaatttaagaaaatatgGACC ACTAGATgacaaagaaatattttaagcttctctTTCTTTGCCTGGAAAAG GTTacagattcgcttctagccttCGGTTATGCTTCATACAATTTCATCAt ttatttataaatttctttttctttgtactCTGATCGACCTGTATTCTAGT GGTGTTTTTTGCAGGTAGTGCAATAAGGGCAGTAATCAAACTATTAATGC ATACCTTAGCACCTGTTCTGAGagaaatataaagaaattaCAACTGCTGA TAAGCTGGACAGTGAGTCATTAAGGGTTTGATATTTTGTCCTTTATTTTC TATATATTgtgaggtttgtttttgttaaatatGTCACACCTATCACTGAT ATTGCTCTCTGAAGAAAGATATTTTGTACCAGATTCTGAAAGTTTTGATA AAAGTGCCAGTCATCCGTTGACTTCGTTCTTTGCAAtgatttgataaaat atattatttttcattctatTCTCAAATTTATCAAATCTACGTTGAAGTTC TCCTTGTTTTCCGAGCTGGGATTTTTACCTTttatttagttttgattttt ttacatattatgTACATAAATTAGGAGAAAACACTGCGAATTATAGTTGA ATATAAATTTTCTATTTAAAACAAATCTAGAAACGCTgttttctttctat tttctttttttctgatcCACTCGATTTAATTGGATCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072113TCONS_00072113Clytia hemisphaericatranscript
TCONS_00072114TCONS_00072114Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072113-proteinTCONS_00072113-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:397350..408087 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GOLT1Bvesicle transport protein GOT1B Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.19 35.8 21.86 20.92 40.32 29.97 70.46 77.85 42.15 41.07 24.35 26.61 21.93 19.81 28.97 30.42 45.77 39.56 14.07 26.3 32.99 32.87 43.48 44.72 18.62 23.19 19.26 12.53 29.51 26.23