TCONS_00072114 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072114
Unique NameTCONS_00072114
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072114 ID=TCONS_00072114|Name=TCONS_00072114|organism=Clytia hemisphaerica|type=transcript|length=1635bp
GTGGACCACTTATATTGAGTCGCTGGGTCCGCTTGCTGACTTGAACGTGG
CACCGAGAGTTCAAAAATTTCACCACTGACCTCACAGCTCATTTAGTCCA
ggaatttttagatattttttagCTGCCTGTGTGCAGTGGAAGTATTGGAA
AGATGCTGCCAATAACAGACTATCAGAagATTGGAATCGGCGTCACAGGA
TTTGGTATGCTATTCCTTTTCCTTGGAATGCTTTTGTTCTTTGATCGTGG
TTTGTTGGCAATAGGAAATatCCTTTTCATATCTGGTTTAGCATTGGTGA
TTGGCCTTGAAAGAACATTCAGATTCTTTTTCCAAGTAGAAAAATTGCGC
GGAACAGCCTTCTTCCTTGGTGGAATATGTATTGTGTTGTTAGGGTGGCC
CTTTGTAGGAATGATTGTTGAAATTTATGGTTTCGTTCAattgttcaaAG
GATTCTTTCCAGTTGTTATAAATTTCCTTCGGCGAGTTCCAGTTCTAGGG
AATCTCCTACTTTTACCAGGAATTAGCACTTTTGTCAATTACATTGCGAA
CGATCCAAATAGCATGGTATGAGCTCTATATAAACTCTTTTCTCAACTTC
TAATCTCATCTTCGTAATAATAacgaccaaaacaaaccaacgaTCAGACA
ATGACGACACAATGACGTTATAGCGACTATGTAACCAACTGCATTGTTTT
GTTTCCGTATTAGAATGCAGAGAAATCTATGCGGTAGGGATGTTTGTTGT
GTTGGTGGATTACTAGATTCGTGATTGGCTCATCGAAAGACCTATGTAAT
GAAGTGTAGCTGAAGACTAGAATTGATTTTCCTATATAGATTTTGAAGCC
ACTAATTTCCCACCTAAGTTGCGCAGTCCGcctggttttcacacaaacgc
ttggttgaaataaacattttaacaacaaatttaagaaaatatgGACCACT
AGATgacaaagaaatattttaagcttctctTTCTTTGCCTGGAAAAGGTT
acagattcgcttctagccttCGGTTATGCTTCATACAATTTCATCAttta
tttataaatttctttttctttgtactCTGATCGACCTGTATTCTAGTGGT
GTTTTTTGCAGGTAGTGCAATAAGGGCAGTAATCAAACTATTAATGCATA
CCTTAGCACCTGTTCTGAGagaaatataaagaaattaCAACTGCTGATAA
GCTGGACAGTGAGTCATTAAGGGTTTGATATTTTGTCCTTTATTTTCTAT
ATATTgtgaggtttgtttttgttaaatatGTCACACCTATCACTGATATT
GCTCTCTGAAGAAAGATATTTTGTACCAGATTCTGAAAGTTTTGATAAAA
GTGCCAGTCATCCGTTGACTTCGTTCTTTGCAAtgatttgataaaatata
ttatttttcattctatTCTCAAATTTATCAAATCTACGTTGAAGTTCTCC
TTGTTTTCCGAGCTGGGATTTTTACCTTttatttagttttgattttttta
catattatgTACATAAATTAGGAGAAAACACTGCGAATTATAGTTGAATA
TAAATTTTCTATTTAAAACAAATCTAGAAACGCTgttttctttctatttt
ctttttttctgatcCACTCGATTTAATTGGATCAT
Run BLAST on NCBI

transcript from alignment at scaffold_71:397350..408087+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072114 ID=TCONS_00072114|Name=TCONS_00072114|organism=Clytia hemisphaerica|type=transcript|length=10738bp|location=Sequence derived from alignment at scaffold_71:397350..408087+ (Clytia hemisphaerica)
GTGGACCACTTATATTGAGTCGCTGGGTCCGCTTGCTGACTTGAACGTGG
CACCGAGGCGAGAGTTCAAAAATTTCACCACTGACCTCACNTTGCTGACT
TGAACGTGGCACCGAGGCGAGAGTTCAAAAATTTCACCACTGACCTCACA
GCTCATTTAGTCCAggaatttttagatattttttagCTGCCTGTGTGCAG
TGGAAGTATTGGAAAGATGCTGCCAATAACAGACTATCAGAGTAAGCTTA
GAATTATTTTCCTagctattttttttatataatttaatGATCTATTATTT
TCTCTCCTACTACTCAATCAAACCAGACGTCTTCTGCGCTTGATAGGATC
GATCATGGGAacggattacttaacgatccagataggagatcgatagagga
tcgaaactcaagatttttttaagcttatgattagttatcgattatttatc
gatctatcgtcgatcttttatcgatcttcagtcaggcacatcctggcaaa
tgaacggggtgagcatttgcatggggtattcgtcacccagtgcaaatgag
ataggacgtctcaggctaaaagcgtgaaaatgaataaaaatgaacttcaa
actgaaaacgggaaaaaaggaagaaaaccgggaactttattttttcgtta
aaagtttcttcaatcttcgaagacaaaattgaccgatggaaaaaaaattt
catctatgcagttcttcaaaatgaagcaaaatatttccaacccagttcaa
ttgcgtggggtatcagttacatcaatatgccttcttacctgtctttaaaa
atataaataaaagtaatcacggaaaaggacgcgaaaaaaaaagacatNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNggtgtagcgaaaggatacttttgccaccggacaaatacaccg
gacagtccggtgcatCAGCAGGGTCCTTATCGACCCTATTGactcataca
cgtttttttttttataagaacatcctaaatatttgaagccttcggatgtt
cttaactttttgagttttaagccttaaaatgttcttaagatgttcttaat
ttttcttgatttgtaaGTCTTAAAAAATTGCTCACAGGAGACCTGACTGG
TCAGCTGGCTTCAAAAAATTATCGAATTACACCAATTAGCCTTAAACTAA
CAGCAGTAGGTGTCTATGTAATTatgtaaaaaaggaaaaacatgaCACCT
TTTGACTTTCTTGCGCTTTGTGATTCATAATCGACCTAATTTGTTGATTA
TATCATTACAACATTTGTCATCATGGACAAACGctaaacaaaatttttag
tacaaataaaatgattggaaaagaaaagagaaatctTGAAGTGCAACCAC
ACCTGAAACACATGTTTTGTTTGAATTCTATGCATTTATATGAAATCCAG
CTTACAGTATCAGTATACTGTTTTCGAAAGTTTCACTCAACTCGCAAGTA
TGTCAAGGAAACAAAAAGCAACTCAAATGACTCTGGGAGCGTTTAATTTT
ACGAAGAAAGTCAAACATAATGATTTACTTCTTAACATCGCCATTCCTAG
GACAGTTGtcgaaaaagaaattatcaaaaGATTTCCATGCGCTTATTGCC
CGGAgaaatttttagagaaaaaaggACAAGTAGTTCATGAGCAATTTTGC
AAAGATAAAGACCATGAAAAGTGAGTTACATAATAcatattctttttctt
ttatgaatatATACAGTATATACTTTTTAATACTGTACTGTATGCTAGTT
ATGTATTCCTTTACAATATGTATCACTTCTGTACTGTAACCACAGTTCAT
ATCAAACATGATCAAACAgatgagaaaaagattttatatTATGTACTGTA
TAATTTTTAGAGCCCCCGGATTACAACCATCATCACCATCACCAACAACG
CATTCAAATACCGAGACGACCAACGAAACAAATGATGTAGCATGTAATGA
AACAGACGATGTCGTGGTTATTGGATCAATACCAAGTGAACCACATGAGA
ACTCGAAAGACGATCAACCAAAGACCATGAGACGTGGAAAGGATCGCCGA
GAAAAACATTCGATCATCAAGAAGTCGAACGTTATTGACGAAGTGGAGAT
GGGAGAGTTATCAATAGAAGAAATAGCGCAAAGATACAGCATCAATCGTT
CCATGGTAAGACGCGtttcatttcaaacaaaaactttggtCTTAATGGTA
TTAAACCGTATACAGtactgtatgtatgtatgtatgtactGTACTGCGAG
TCACACCTTACAGCAAACCTATCTcaaggtttttcttttttcgattTCTA
GGTTTCGAAATGGATAAAGGACAAGGTCAAAATCAAAGAAGCATCAAAAA
CCGCCCACCGTCTTACATTCAAAATACGTCCCTCAGTGAAATACAAAACA
ATGTATACGGCTCTCCTCGCGAAATTCAAGACTGCACGTGAAAAGGGCTA
TTGTGTCAATTTCGGCTGGTTATGGTCTAAAGCTCGTCAAATTTACAAGG
AGCAAGAAGGTGAAACTGCCATCGTTCGTAAGCATGTTATCACAACCTTT
ATCAAAAGATATAACTTGAGAATGCGtgcaaaacaaagaaatcgGAAGAA
GTCGAAAGAATCGTTTCGAGATGACCTATCAAAGTGGCATGGAACGATGC
GTGAACGCCTAGTTAGGAGCGGAAAGGATGCCAGTTATGATCAAAAATAG
GGTCGCTTTCTACCGACTCAAAGGTTCAACGTTGATCAAAGCCCTTTACC
ATTCGCCATCAACACCAAACGTACATACGAGCTGGTTCAAAAAGGAGACC
GTTACCATAAAGTATGGATATCGCAGCCAGGGAGTGGTCTTGAGAAAAGG
CAATGCACCTTACAGGTTTGCTTTCGCCCAACAGGAAAACAACCCAAACT
TGCCATCATTTTCCGTGGAAAAGGTAAAAGGATTAAGAAAGAGGAGAAAG
AAGCGTGGCACAAGGACGTCGATGTCTACTTTCAGGAAAATGCATGGGCG
GACACAGATTTCTCTGTTGCCTGGGCAAAGAAAACGCTTAAGCCGGAGGt
cgagaaagaagaaagattcgCCCTGTTCTGCGATAATCTGACAGCACAAG
TCTCTGACGAATTTAAAAAAGAGATTTCCAGTCAATCTGGTGTTTGCTGG
TTTGGTCTTCCCAATGCCACTGATCTTTGGCAACCCGTAGATGCTGGGTA
CGCGGAGCTGCTTAAAATATTCGTTCAACAAGTCCAGCATGAGTGGTTGG
ACAATGAAGACAATGCCGAAAGATGGTATGGAAACGAATCAGGATTTTCA
GCAAAGGACCGACGCATCCTTATCACCCTTTGGGCTGGAAATGCTTACCA
AAAGCTCATATCCGAAGACTATGATGACTTCCGATGGCGTCTTTTTGAAA
AGACAGGTTGTCTCATCACAGCAGATGGATCTGGAGATGACAAGATCGCA
CCAGAGGGTCTACCGGATTACAAACCACCACCTCCACTTGATTACATCGA
ACCGTCAACTGCTCCTCCTGTCTCAAATACCGCCGAGGCTGAAGTGCTTG
AAATTGCTGATGATGCAGGAGAGAACAGTGACGAAGAAGGAGAAAGTCTC
CCCGTTGAGGAGTTAATTGATGATCCGAAAGATAGAACGTACGATGACGA
ACTTGTTGGCCGAAGCTTGAAAACACTGTACGAAAATGGCTGGTTCACTG
GAAAAATCAAGTATTTTAACACTGGCATATGCCGCTATTTTGTCCAGTAC
AAAGATAAAACAACAGACTTAATTGATATCGAAGATATAGATGGTGTGGA
gatgattttgatttgaaaattgttgCTCCATACTGtacttttttgtaaat
attctAGACCTTTTAGCTTTTTATTTATTAACATGTGTGactaaattgaa
aaatgttcttcTCTCCATTATTCTTGTTTCTCCTAAGCCTCtgaatgttc
ttagcatgttcttaacattttagtcatcgaagccttatgttcttatatac
tatgttcttataaaaaaaaaacgtgtactcgaTTTatgatcgataacaaa
tcgattaacgatcgatgacgaatcgattaacgatcgatgacgaatcgata
tactcgattgaaatactagctcaataatggatcaacgaaggatcgatact
CAAgactttttaatggctgaatcttccatcaaTCTCCTATCCgcatcgtt
aagtaatccatcgatcacatatcgatccgtcatcgagccgttccgatgat
caatcctatcgagcgcggacgtctggctCAAACTCGCCgacaaccaaaat
aaaaacttaTCCATTCATACTGTCATAGACACTTTGTTAAGACATGTAAT
GCTAAAACTAAAGCCTCATTTgcgtccggtggaaaaaattcAAGTATCAA
AAAGTGACCAAATGGAGGAATCCAACTCAACTGGAACCTATATAAAACCA
AAGTGGGAAAAACATACAGTGTGTTTTGTTTTCGATAAATAAACTCACTT
TTTCTTTAACCTTTTTGACCCCGAATGCCGTAGATATACGTCCTtgatac
cgtgagtggtcctaaatccgacagccctgcccaaatccgatggggtcttt
taaagatacaaactaaaataaaagcaaacctttcgctgtgacgcaataaa
gataccaaagtgtcaactaaactgagagatttgatacaaaTTGATTTGAA
CCAAATTACAATAATTgtgcttcttataaaaaacataattttctatacat
aaattgttaacgttttataaacacaagcaacagacagtcagtacctttag
ccaaattaggaacatttttcttacttttactagtattcctaattaggaat
attaGGTTTCtccaaaaatagcaaaaaatcgCACGTTAAAAAGTACTTCG
TAAGATTCTTAccatgagattgggtaacttgcatcagtggaggctaacat
gcatagtcctcaaatgaaagacctggctggtcattaaaatacaaaattaa
atcaaaNCAtcattggaggctaacatgcatagccctcaaatgaaagactc
agctggtcattaaaatacaaaaataaatcaaaacaaaaatggtagagtag
agctgcgagcggagctgcgtagctgtattttaatgaccagccaggtcttt
catttgagggctatgcatgttagcctccactgatgcaagttacccaatct
cacggtaccatTCCATTTAGGTGGGAAAGAAAGACTGAGCTCTTGGCTTG
CTCAGGGGACCGAGCTTCCTAGAAAAAACTTCACTCCTCCCAGCCTCTCC
TCCCAGTAAATTGACATCTTATTTATAAAAAGCGGGAAACtcactttctg
tttttcttcgtGATAATAAAAACGACAGTTCGTTTAATTCctaatttgga
attatttttttggggCGTTAATAATTCCACCATCCgcgaaagaaattttt
caattttttgcacagttatCATATTTGGTATACCAAATCTATTGGTCATA
CTTGGAATTTGCGAATATAGCTCGTTTCAGAGatattaaacttttaaata
tttcttcctaattaggaatcctggtaaaagtaagaaaaatgttcctaatt
tggctaaaggtacTGACTGACAGATTTAGAATAATTATagatagaggtaa
ttatttttacaacttacacttttttgatcacatttttgattgacatttat
agccatcttgttagatgttttgttctgagagtccttgcaatagtttatcg
ttcaacttggagaaggaatttttgtaaacatagaatttttttcataacag
ttatttggagtgtcggaattaggcagggctgttggatttaggaccactca
cggtacatTCTGAATGCCGTACATTATGCAATTTGATAGACACGTCTTTC
TCGGGCCATATCTTTTATTTGCTTGCTTGGTAATCGTTCAAAATTGTGAG
CAGTAGAATGTTTTTTGGATGCTAATTTTTGGTATATGGCTTCAGGAGTA
AGTATATAATGAAAAAATACTAAAGAAAGATAATTAATAATTTTAAACTT
TCCCCACTTCTTTTGCCTAAGAggtgaaaaataccaaaaaagtgACATTA
TCGAAAAACGAGTAAAAAAACTTTGGTAAATGTGAAGCTACCATTTTAGT
TAGAGTATTTTATTAGGAGAGTTACCCCACCTTAAAGCTGCAgaatttaa
ttagcttttcagggatagctaattttttatcaaaagatttctagttcttg
agttatgacaAAATAACCGAACATGtccattttgtcaaaaaatgttgCCA
ACGtacatttttgagtttttcgaaaataaatttttttccagttgtggtcg
gaaattctgatgaaaatcCATGAACATTTGCAAAATGCATTGAAAATTCC
ACTCAGAGAATTTATAGAGTGACATATACAGCAGATACCTGTGAACAGGC
TTCATGAGGTAGGCTTACTGTTATGATCACCATTCCTCCAGGAAGATACC
ACACATTTGCCCatttctgacaaaaggaagtaactgacatttttatgaat
tttcattttttttgcaaaaatgaagCCGATCTCAAAATGTTCATTGTTGC
AGAGAAAAACAAGACCCTTGTTCTGTCAGTAAACCTCGaccaaaagaaat
tgaataaaGAAGCAACTGACAGGTTTCTGGAGAatgttttctgacaaaaa
gaagtaaatgactgttttgcttctttttgtcagaaaaagGTATCACTTAC
TGCCTTTTGtcagaaatatttctttcttcaatttcttttggttGAGGTTT
ACTGACAAAACAAGGGTCTTATTTTTCTCTGCATCAATGAACATTTTGAG
AAAAGCAGTGATGCTATGAACTAATCTTCAATGAGTAGAACAATAATCAG
TCATTTGTTTTTTGATATGTACCATCTGCATCCGATGCCAGCATAAAACG
CGCTTTGTCAATTTTCTCAATTTCAACTTCATGTCAATTACTTCCTTTTG
TCAGAAATGGGCAGAAGAATGGGTGCACCAACAGGAGGGTACACTGCGGT
CTGGGTGCATGCCAGTCTGCTGCCTATTCATAACAAAACACTGCGCTTGC
CTGTGCACACTCGCGTGGGCTACTTGTAAGGCCGGTGCATCATGACAATT
TAGTCATAAGTCAATTGTTGATTCTTAAAGGTTGAatttttcatatcttt
agtTCTCAAACAAAAGTGGGAATTCGATGCAAGCTTTATGGATTTTTCAT
CAGCAAACCATTATATAACTTTTGATGGGAAAACATTCAAGATGTGTTTT
TTAATATATACATCAAAATTGATGTGAATTATGCTCTTTATGCTGTTGCT
TACTTTTGCTATGGCAACAAGTGATGACATTTTACCGATTACTATGCTAA
ATTTAGAAATGTCTTAGTCAAAGAAATGATTTTACATTATAACTCTATTG
TAATTTGAAGTATCATTGGAAGAATAatgtatttgtttttcttttagagA
TTGGAATCGGCGTCACAGGATTTGGTATGCTATTCCTTTTCCTTGGAATG
CTTTTGTTCTTTGATCGTGGTTTGTTGGCAATAGGAAATGTAAGTCTTTC
ATTTATGAAATTTCAGTCTGAATCTATGAATCAAAATCAAATATAGCAAA
AAACAGAAATATTCTTGTGCAACCCTTTATGTTCTTGTTAAATTTGTTTG
ATTGAAATTCTTTATTACTAATGTATTTGATCATTTTCTGAGAAGGTGGG
ATAAAACAGGAATAAATAAGAATGATAGTACAAATTTGATTCAATCTGAA
TATGAAATGATATAAGTGGCTTACTTTTATGCCACTTATTTGTAAAATGT
TCTAAACCTAGGTAACAGCTGAATGAAAATGTTGTATCTACTAAAAGGGA
AACCACGTTCGTTAAAAACTTCGATTACAGCAACCATTTACATTGATTTT
TACTAAATGCTTGATTGCTATTACCAAGTAACAATACCAAGTTATGATAA
TAAGAATGAAATGTTTTGAAGTGTACACTTTTTATcactctttttcaaaa
tatgttttatttttatagatCCTTTTCATATCTGGTTTAGCATTGGTGAT
TGGCCTTGAAAGAACATTCAGATTCTTTTTCCAAGTAGAAAAATTGCGCG
GAACAGCCTTCTTCCTTGGTGGAATATGTATTGTGTTGTTAGGGTGGCCC
TTTGTAGGAATGATTGTTGAAATTTATGGTTTCGTTCAattgttcaagta
agaaacgTTTTATTTCGTTTTTACTGTAGTACAGTATTGTTCTTTCTACC
CAAAGAACTGCTTTAATAACTTTCGCCCAGTTTTTTAAGGGGACTTATTT
CTTTTACAATATTCTGACATTTCAATTATGTTTTACGTTCTTCTTTTCAG
AGGATTCTTTCCAGTTGTTATAAATTTCCTTCGGCGAGTTCCAGTTCTAG
GGAATCTCCTACTTTTACCAGGAATTAGCACTGTAAGTAACTTTAGCCAA
TGATTTTAGAGAAGAACTTTCGTCCATTTTAAATCAACTCAAAATTAGCA
TTTTGTNTACCAGGAATTAGCACTGTAAGTAACTTTAGCCAATGATTTTA
GAGAAGAACTTTCGTCCATTTTAAATCAACTCAAAATTAGCATTTTGTAT
TGTGTATTTCATTATTATATGATCGCTTCAGCTAACAATGAGAGGTGCTG
ATGATATCAATATATGTTGTTTTTCGCCTTGACCTAGTCTCCGAGTAGAA
TCAAGCAAATGTATCACATCTGTTGATTCATACTAATCTGGAGtttatat
tctttcttttcAGTTTGTCAATTACATTGCGAACGATCCAAATAGCATGG
TATGAGCTCTATATANATATTCTTTCTTTTCAGTTTGTCAATTACATTGC
GAACGATCCAAATAGCATGGTATGAGCTCTATATAAACTCTTTTCTCAAC
TTCTAATCTCATCTTCGTAATAATAacgaccaaaacaaaccaacgaTCAG
ACAATGACGACACAATGACGTTATAGCGACTATGTAACCAACTGCATTGT
TTTGTTTCCGTATTAGAATGCAGAGAAATCTATGCGGTAGGGATGTTTGT
TGTGTTGGTGGATTACTAGATTCGTGATTGGCTCATCGAAAGACCTATGT
AATGAAGTGTAGCTGAAGACTAGAATTGATTTTCCTATATAGATTTTGAA
GCCACTAATTTCCCACCTAAGTTGCGCAGTCCGcctggttttcacacaaa
cgcttggttgaaataaacattttaacaacaaatttaagaaaatatgGACC
ACTAGATgacaaagaaatattttaagcttctctTTCTTTGCCTGGAAAAG
GTTacagattcgcttctagccttCGGTTATGCTTCATACAATTTCATCAt
ttatttataaatttctttttctttgtactCTGATCGACCTGTATTCTAGT
GGTGTTTTTTGCAGGTAGTGCAATAAGGGCAGTAATCAAACTATTAATGC
ATACCTTAGCACCTGTTCTGAGagaaatataaagaaattaCAACTGCTGA
TAAGCTGGACAGTGAGTCATTAAGGGTTTGATATTTTGTCCTTTATTTTC
TATATATTgtgaggtttgtttttgttaaatatGTCACACCTATCACTGAT
ATTGCTCTCTGAAGAAAGATATTTTGTACCAGATTCTGAAAGTTTTGATA
AAAGTGCCAGTCATCCGTTGACTTCGTTCTTTGCAAtgatttgataaaat
atattatttttcattctatTCTCAAATTTATCAAATCTACGTTGAAGTTC
TCCTTGTTTTCCGAGCTGGGATTTTTACCTTttatttagttttgattttt
ttacatattatgTACATAAATTAGGAGAAAACACTGCGAATTATAGTTGA
ATATAAATTTTCTATTTAAAACAAATCTAGAAACGCTgttttctttctat
tttctttttttctgatcCACTCGATTTAATTGGATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044789XLOC_044789Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072114-exon-scaffold_71-1491911889:397350..397406TCONS_00072114-exon-scaffold_71-1491911889:397350..397406Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1510915933:397350..397406TCONS_00072114-exon-scaffold_71-1510915933:397350..397406Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1575043694:397350..397406TCONS_00072114-exon-scaffold_71-1575043694:397350..397406Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1491911889:397471..397590TCONS_00072114-exon-scaffold_71-1491911889:397471..397590Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1510915933:397471..397590TCONS_00072114-exon-scaffold_71-1510915933:397471..397590Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1575043694:397471..397590TCONS_00072114-exon-scaffold_71-1575043694:397471..397590Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1491911889:405597..405688TCONS_00072114-exon-scaffold_71-1491911889:405597..405688Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1510915933:405597..405688TCONS_00072114-exon-scaffold_71-1510915933:405597..405688Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1575043694:405597..405688TCONS_00072114-exon-scaffold_71-1575043694:405597..405688Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1491911889:406168..406346TCONS_00072114-exon-scaffold_71-1491911889:406168..406346Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1510915933:406168..406346TCONS_00072114-exon-scaffold_71-1510915933:406168..406346Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1575043694:406168..406346TCONS_00072114-exon-scaffold_71-1575043694:406168..406346Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1491911889:406500..406581TCONS_00072114-exon-scaffold_71-1491911889:406500..406581Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1510915933:406500..406581TCONS_00072114-exon-scaffold_71-1510915933:406500..406581Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1575043694:406500..406581TCONS_00072114-exon-scaffold_71-1575043694:406500..406581Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1491911889:406983..408087TCONS_00072114-exon-scaffold_71-1491911889:406983..408087Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1510915933:406983..408087TCONS_00072114-exon-scaffold_71-1510915933:406983..408087Clytia hemisphaericaexon
TCONS_00072114-exon-scaffold_71-1575043694:406983..408087TCONS_00072114-exon-scaffold_71-1575043694:406983..408087Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:397350..408087 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
35.0402	34.2642	21.6059	20.3611	37.1242	26.5537	61.1861	70.3294	39.8108	38.9228	22.5854	24.6446	20.5507	19.4651	26.437	27.2823	42.6044	36.8356	13.2984	25.6405	30.5408	30.8793	42.2949	43.5875	17.3302	21.8992	18.3685	12.1434	28.2458	24.7876
Blast
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BLAST of TCONS_00072114 vs. Swiss-Prot (Human)
Match: GOT1A (Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.292e-27
Identity = 66/108 (61.11%), Postives = 85/108 (78.70%), Query Frame = 3 
Query:  153 MLPITDYQKIGIGVTXXXXXXXXXXXXXXXXXXXXAIGNILFISGLALVIGLERTFRFFFQVEKLRGTAFFLGGICIVLLGWPFVGMIVEIYGFVQLFKGFFPVVINF 476
            M+ IT++QKIG+G+TGFG+ F+  G LL+FD  LLA GN+LF++GL+L+IGL +TF FFFQ  KL+GT+F LGG+ IVLL WP +GM +E YGF  LFKGFFPV   F
Sbjct:    1 MISITEWQKIGVGITGFGIFFILFGTLLYFDSVLLAFGNLLFLTGLSLIIGLRKTFWFFFQRHKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFGF 108
The following BLAST results are available for this feature:
BLAST of TCONS_00072114 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GOT1A6.292e-2761.11Vesicle transport protein GOT1A OS=Homo sapiens GN... [more]
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