XLOC_044547 (gene) - C. hemisphaerica

Overview
NameXLOC_044547
Unique NameXLOC_044547
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_63:334843..337011-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044547 ID=XLOC_044547|Name=XLOC_044547|organism=Clytia hemisphaerica|type=gene|length=2169bp|location=Sequence derived from alignment at scaffold_63:334843..337011- (Clytia hemisphaerica)
CATGATTCTCTGCTCGTTTCTTCTCATGATGGTTTGAATAATTTATGCTT
ATTATAAAAACTTTTTTCCAGACGGGGGTCATGTTATCTACAGCTAATAC
CATGTTTTTATTGATAAATTAAAAACCTCATGCCAATATCTATAACATGA
TGTCATATCTCTTTAGATAATAGGTCTATTAATTTATGTTAATTCATGCG
GTTATGATAAGCAACAAATTTATGCAACCATCATGCTGACTTTAGCATTT
GAAAATATTATAGTATAAAACCCCCTGGAATACAGACATCTTTTACATTC
GTTTCTCAATGTTTTTTTCTTCTTATCCTCTCTACATATCTTTGAGATAT
TCGTGGAACTGAGCACGGAGTCGAATGGTACCGTGGCTGTTTGCTCGTCG
ACTGATATATTTAATGTGGAAAGAAATATGATCAGATGTTAGTTGTTCGC
CGGCTAGCTAAAAGGAAGTCAAATGTCTGGCAAGCTGTCTACTGTTTATC
TGGAAGATCGATTCATATCCACATTAAAAGGAGTTCTAGTTTCCTATTTT
ATTGGTTAAAACTCTGGTAATTTTTTCATTGAAATTTGTTGTTATTTTTG
CCATAAACAAAGTTGGCTGAGGTAACAGAGACAAATAAAGACATGACTTT
GATATATACTCCTGGTTATCGAGCTGCAAACACAGGGAGCGGGTCTCCCT
TACGCTGTTCAAGTCCTATCAGTTTTCGATCATCTGCTCGCACCGATACC
TCAAAAGATATGGATGGTACGCAGGTAATTAGCACATCACCTCACAGTCG
AGTCTTGGCTGAACGAATGAAGGAGATTCAAATTTCACTTTCCTTTGAAG
ATCTTTCTTCATCTATAGAAAACATTGCGTCAGCAGTAGCCTCGAATTCG
TGCTGTTCTCATGACAACAAACAGCCTCGTTCTCAGTCCTGCATTATTGA
ACAATCTAATAATTTCCCCAAAATGGTAGACAATACACCACGAAGTATTT
TAAAGAAATCTGTTAGTGCTGATGCGGCGTCCATTGCTATTTTGAGAGAA
AGTTTACTGGAATCGAAGTGTTTGTCTATCAGCTTGTCAGACACTAATAT
AGCTCTATCGTCTTCGTGTGACGGTTCCACGACGCCAGAGGAGCCAAAAA
CACCAACCAAAAATGTAACATTTGCTGACGACAACAATTTATCTTTATGC
AAAGTTCATAATTTTGTACCGAGTAGTGAAAAACTTGATCAGTGGCAATT
CAACGTGTTTCATCAAACTCATTTCAAGACGGACCGTTTATCCGGAAATC
AACTTATGAATCCGGTCAAAGGTAAGAAAGTAATCCGGAAACCTAACGAG
TTGTTATTATGTTTCAAGGAGCCGTGTTCGAATGATGATTTCGAACAACG
TTTTAAATATAAATGTGTGGCTTTAGAAAGATGTGCTACTCGCAATCGGA
CCTTGACTGGTATCATTCTTGTCAAAAACATCGAATTTCATAAATACGTC
GCTGTTCGGTACACGGTTGATCGTTGGAAAACGAGTGATGAGGTTGAAGC
GTGTTACGTTCCAAACTCTAACGACGGTGAGACCGATCGTTTCTCTTTCA
CGCTTGCTTTACCGAGAAGTTACAAAGAAATGGAATTTGCGATTTGCTAT
AAAACAGGTGCTCATGAGTACTGGGACAATAATTATAATAGAAACTATAA
AGTGAAAGATGCCCTATCCCCTGCTTCATTAGCTTAAGTTATTAAGTAAT
TTTCTGACATGATTTTTAGGATAGGATTTTTAGTTATTTCTCATATTATT
AATAATCTTTTTAGCGTTTTTCACTAAGATTTAGTTTCTTAATTTAGGGT
GTTTCTTTTAAATCTTTTAGGAAGAATTTAGTACTCGTCCACTCAAAATT
ACTTTTTTAACAATTATTTCTGAATTTACTTAAAATGCTAGGAAATTTTC
TTTTAGAAAATTCTGTAACTTTTTTCCCAGGACCATTTTCATTTGTTATG
TTCTGTAAAATATTTTTTTCTATTTTGTAAGTATGTTGATATTGTTGCCC
TTTTCGAAATATTGGACCTTGAAAAATGTCTTTTTTAAAGGACAAAGTTT
TATTAATATTTTGAGAGTTGTATTTAAAGTAAGTTTCTTACGACAAACGA
AAATTGACAAAGATCCTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071732TCONS_00071732Clytia hemisphaericatranscript
TCONS_00071731TCONS_00071731Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071732-proteinTCONS_00071732-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:334843..337011 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (49.18 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.1	0	0.26	0.09	0.25	5.54	5.52	7.21	12.63	7.03	8.86	9.21	6	1.76	2.4	25.65	49.18	31.12	31.86	26	24.64	23.26	25.43	20.46	31.22	18.25	12.87	1.05	0.53