Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00071732-protein ID=TCONS_00071732-protein|Name=TCONS_00071732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
Term Definition
GO:0005515 protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category
Term Accession
Term Name
molecular_function
GO:0005515 protein binding
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 Expect = 8.1E-29 / Score = 100.0 Score = 24.037 Expect = 9.6E-22 / Score = 76.8 Sequence PF03370 PS51159 G3DSA:2.60.40.10
IPR Term IPR Description Source Source Term Source Description Alignment
IPR005036 CBM21 (carbohydrate binding type-21) domain PFAM PF03370 CBM_21 coord: 184..282 IPR005036 CBM21 (carbohydrate binding type-21) domain PROSITE PS51159 CBM21 coord: 178..282 IPR013783 Immunoglobulin-like fold GENE3D 2.60.40.10 coord: 189..286
Blast
BLAST of TCONS_00071732-protein vs. Swiss-Prot (Human)
Match:
PPR3C (Protein phosphatase 1 regulatory subunit 3C OS=Homo sapiens GN=PPP1R3C PE=1 SV=2)
HSP 1 Score: 95.1301 bits (235), Expect = 1.340e-22
Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 0
Query: 100 KNVTFADDNNLSLCKVHNF--VPSSEKLDQWQFNVFHQTHFKTDRLSGNQLMNPVKGKKVIRKPNELLLCFKEPCSND-DFEQRFKYKCVALERCATRNRTLTGIILVKNIEFHKYVAVRYTVDRWKTSDEVEACYVPNSNDG-ETDRFSFTLALP---RSYKEMEFAICYKTGAHEYWDNNYNRNYKV 281
K V FAD LSL +H F +P D + D L N + + +K + L+L F +P ++ F F+ V LE C+ + RT+TG + VKN+ F K V +R T D WK +V+ Y+ N G ++D FSF + LP + +++EF I Y +WDNN +NY++
Sbjct: 83 KRVVFADSKGLSLTAIHVFSDLPEEPAWD-----------LQFDLLDLNDISSALKH----HEEKNLILDFPQPSTDYLSFRSHFQKNFVCLENCSLQERTVTGTVKVKNVSFEKKVQIRITFDSWKNYTDVDCVYMKNVYGGTDSDTFSFAIDLPPVIPTEQKIEFCISYHANGQVFWDNNDGQNYRI 256
The following BLAST results are available for this feature:
BLAST of TCONS_00071732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
M S E N I A S A V A S N S C C S H D N K Q P R S Q S C I I E Q S N N F P K M V D N T P R S I L K K S V S A D A A S I A I L R E S L L E S K C L S I S L S D T N I A L S S S C D G S T T P E E P K T P T K N V T F A D D N N L S L C K V H N F V P S S E K L D Q W Q F N V F H Q T H F K T D R L S G N Q L M N P V K G K K V I R K P N E L L L C F K E P C S N D D F E Q R F K Y K C V A L E R C A T R N R T L T G I I L V K N I E F H K Y V A V R Y T V D R W K T S D E V E A C Y V P N S N D G E T D R F S F T L A L P R S Y K E M E F A I C Y K T G A H E Y W D N N Y N R N Y K V K D A L S P A S L A 50 100 150 200 250 Expect = 1.34e-22 / Id = 32.28 Sequence PPR3C
Match Name E-value Identity Description
PPR3C 1.340e-22 32.28 Protein phosphatase 1 regulatory subunit 3C OS=Hom... [more]
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