XLOC_044051 (gene) - C. hemisphaerica

Overview
NameXLOC_044051
Unique NameXLOC_044051
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:461029..467900+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044051 ID=XLOC_044051|Name=XLOC_044051|organism=Clytia hemisphaerica|type=gene|length=6872bp|location=Sequence derived from alignment at scaffold_58:461029..467900+ (Clytia hemisphaerica)
CAAAGTGTggtcatttcaatttttttctaattttcttcttcaaatgaAAT AGCgttgatatttttggaaaacatttgaTTGAAAACTTCTTTTGAACACG TCGTTATTGGTCAAGTTGTTATgtaaagtaagtttttttttcaccgaaag ttttcatctttgtttgtcaaatgttgtcaaaaattttcgtaACAGTCTAT TTTCAATTCTggtataattgaaaatgctcaaacaaaatttttctcaatat ttcaaTGTTGAGCATTggatatatatggtgaagataggtaatatctgtca ttatcatcaacatgaaaaatataagcaatctgattggctaaaaacgcgta cataattgctgtatttcatattgtaccgtacaaatacaagaccACGTTCA AAAAAGCGAGAGAGATCATATTTCGTACAACCTTATGATTAGAAATGATT TCTTTTCGCTTCCAATACACAACAACTTATcaaaagagtttatgaaaaga atgttttgatctttttaatgaccattcgattcttttttcgaatgttttga tgttgatttcatctaaataaaagtaaaagaataaaatattggaagagaaa aacaaaacacagaGAAAGACAAATGGAGAGAAAAGTTTGTTGATGTTTTT CAAGTtgatgataaaccagttatcacactttCACTCTACAATATAggata tatttttctcgttcagacttttctatatttatgacgaaaaatctgaactc gaaaaatatatttataatttCCAAAAGGTGATTTATATGGCTTTTTTTCA TTAATAGACTCACCAAAGAAATGAGAGATGCTGCCAGAATAATTTTGATG GCTTTGAGCCTTTGTTCATTTTGCACAAGTACAGTATATGAAAGTAAGTT GTACTCATTCCTTCTGGTAATGATGGACCCAAgcttgaaaaaaagaaagg tCGCTGACAAagtaaaaatgatttgaaactttATAAAAATTCCCAAGTGA GTGAatcgcccgggggggggggggtacttaagcaaaaatggatgatgggt atgtgccgtatgtgcggacggtaacggtcggttttttcacctttcaaagt ctctctaagggtcggaaaagtcagaaagttttaaattagtctctctaagg gtcggaaaattcaggatttttaggaaattttttgatttccagaaaaaaaa ttgtaataaagtctctctaagggtttgacttttttcaaaaatcaaaaaaa aatttgtaataaagtctctctctAAGGTGAAAcaaaggcatgtcccaaat atattttgcgtgacgcgcaccgcttcccattattcctCAATCCTCATATA TACTATATAGCTCAAAACaatcgtatcaacgagaggatttcgaaaagtgc tgggtcaaaaatttacattaagtGTCAATCTGAAGATATtggtcaaaaac tgattttgacgttataaaatacatcgaaaaaacacctcATGAGTTAGATT TAAATGACTTCATTATAGAAACGGCGATAACTTCAATTCTATTtatgcaa tcaacaccaaattttgactggagttgtaaattaaggattctgaaatattt gttaatCAGAatatttaaatgacgtcatttattgtcgggaaaaattaaaa tacgtcaaaaaatgctgacgtcatcatgaatcttcaattttttttcatga aatatttcagAATAAATAATCAACATCTCCAGACATaattttgctttgat tgtaGTAAGTTAATTGGAATTATcgctttttttcaataatgacgtcattt taattgtccttttgacgtgtttttttcGATGTActtcataacgtcaaaat ctgttttggccgatatcttgagattggcttaatatcaatttttgacccag cacttttcatCCTCTCGATGatacgattcttttgagctTTATATGAAAGT TAAGGCATaatgggggtaaaaagttgttgaaatttacctgtttttccgac ccttagtgggactaaaATTTCCTGactttccgacccttagcgggatcttt ccaagtccaaaaaaaggtacccttaaggttaagggcggcacataccgtac cctccatttttTGCCTaagttccccccccccccccccgggtcttaGATTG AAAGTTTACACCTTTCTGCATATTTCTCTTGAAAGGCATGACATGACTTC CCTGATAAATTGCAATGTTCTTCGTTTCCACAGGATGTGGTAAAGAATTC GATGTGATTGGATGTTTCACACAAACCACTAAAGCTGAACGTTTCAATAA AACCTTATCCCATGTTGACTGGTGGCGCTATGATCATAAGTCCTTTGAAA TGTAAgatcacgttttttataagaacaaactttatgaGAACATttggctt caatggccaaaatcttaagaacaagatttaggcttaaaactcaaaaagtt aagaacatccaaaaggcttcaaaaaatttagatgttcttataaaaaatgt gataTGATCCTTTTTACCTCCTAACCTTTAAACAgatatttcaaggtttt taatTGCCGCATTATAATGCGTTGCATTTTACATTGCAGTCTGCATTCCT CTTAAATCAAAAACCTAAATTCTTCGTTTCTGAATAAACAAATTTCCAGT TACAAATTCTCATTGTTAAGGTAAGGAGATGTATTTTGAGGGTCATTCTT ATCATAATAAATCATCAATCTCTTGACGATTCAAACACCTGGTGATCATt tacttcttcattttttcaaaggcTTTTATGCAAGTGTTCAGCTAAAGCAA GAGAGAAAGGTTACATCGCCTTTACGTTTCATGATTATGTCGAATGTCAC GGTACCGATGATTACAAAGAGTATACAGATTTGATAACTAATGAGGATCG AGCGAGTGATGAATGCATCAATGAAGAATATGAGATGTGTGataatggtc aaaaatattgtATGGGTGGACCTTATGAGCAATATATCTACAAGTTGAAT TATACAGGTAGCGACATCTTCAATTCTAATAAATGTGCTAGAAATGGTTA AAGTAGTTCCAGGCTCATATCTCGTCAAGCCACTGAAAAATATGAAACTA GTTAAGCGAGGCTAAAAAATGTTTCCTTTGATTTCTATAGGATCCTCACC CTTTGGTTCAAGTAGAAAAAGTTCCATTCTTTGGAGATGGGAAAATTCTA TGGATacataaaaactaaatttgacgAAAACTTGTGTGATGGTATGTGCC CTCCCCAAGGGGAATGGGTCCCAGTCCTTACGAAGTGGGAATTCCTTCTT TTTCAAGTAGGAATGCATAGCGATGTCCAGACACCTAGAGCATATAGAAG ACTAGAGCATATAGCTCATCATGAGCGTAGAACGGACATGAGCGCCAGCA CACAAGACTATCTGCCATAGCACTTTTGATGTAACAAGGTAGTGGTACCC GATTCTCCTTACATGATATGGGTTGACCCAGGTGAAGGcgtgttcacttg ccaagtgagcCGTAGTACTACCGTGGGAATCCAACTGAGACCTCCCGGAA AGAAGAGAGATGACCACCACACAACTACACCCTATAGAATCCCATCGTGT TTCTTTAGACCTCAAATGTCCATCTTATTTTCGCTCTTAACTAGCCATAT TTTTcagtcaaattttgattttaggtaTACCGTTTTAAATAAATGGTAAT TTTTTGTCATCTTTCTTGATACTAATTTTCAGGGAGTGGTATTTTCACAC AATGGTCAAGTTTCGGTAATTGCAGTAAACCTTGTGGTGGAGGAATACAG TATCGTACACGAGAATGTGCTTCTGGTGGAAACGATTGCGTTGGTTCAAC CAGAGAGGAGAGAGAATGCAACATGGAGAAATGTCCTCCTCCACCGTGTA AGACGTTTGTTGCAACCGCCCAGATCTGGTATACGTTttctttcataaga acatcaaaaattttcgaaatcttcggatgttcttaattttttcagtttta agcctaaaaatgttgtgcttattttcaccaatttgtgTAATTTTGTCCAC TTTCCTAAGAGATTGGGTGTTTTAAAGCCtacaaaaccttaaaatattct taactttgatgaattttctttatattttggccgtcgaagccttatgctct tatatggtttattcttttaaaaaacgtgtacatagcATTGTTTTAGTTCT CACTCGCCTTTCTTTATATGTGTGTTTCGGATTTtgaatgaacgttgaaa caacgtcatGTATCAACTGTTCGGAATTGTTGAAGAGAGTTTTGACAGCT TTGATTGACACAAAAAGAAGATGAGGGTTTAAGTATTTCTTCAGGAAAAT TCATTCAACATTTAGAACATAATATGAAGAAGGTCATTCAAAATGAAGTG CTCGGAGGGGACTACAAAATTGTGTAATGTAACTTTAATCTtaaacttat tttctttttcctagTGACACCAATACCTCCAAAAACATGTCGATGGGGAA ATTGGACCAAATATTCCTCTTGTAGCCAATCATGCGGTGAAGGATTTCAA AAACGAACACGAAAATGTGATGGCGGTCCCCAGGTTCCTGGTAAAGAACA ATGCGTGGCAGAGAGTGAACAGATAGAGTCTTGCTTTGTACGAGATTGTC CAGGTGAACTGCTTGTTCCTAAAGTCGAAttacaaattgatttttcaGCT TCGGAGATAGACGGTGCTATCTTCCGTTTTCGAGGGTCAGTAAACGCAGG AAAATATGTATGCGCAGagtcagggcgtcagggcggtttacgggaaaata GTGGCGGTACACTGTAAACACCTCGGCCCCGAACTAaactcgttttcaaa tttatcccgcccCCTATGAATTATTCCCTTTTTCAGTGATAATGTGtgga cgataggatcgtctacttCGGAGAGGGCTTGAAATGGACTTTTTTCATTA cccattttgatattttacgaCATTTATGTCATTTAGGTAGCAAACCCATC ACCAAATGTAGATTCTTAGGTAGTTGGGTCCTTATTCAATGTGATTGGGT TGGCTAAGTCGTAGAGACAATTCCCATGTCTTTAATATCATTAATGTTCT CTTTCAGATGTCAATCATTGGGGACCATGGTCCAGCTACACTACTTGCAG TAAGACATGTGATGAAGGCAAGAAGTCAAGAAAAAGAGTTTGCATCCAAG CAAATCCTCCAAATAAAGATAAAAGCAAAGATACTTGCCATGGTGATCAA ATGGAATATGCCACCTGCAATCTTCGTCTTTGTTTAAGTAAGGTTTTTCT TGAATCTTTAAAAGAGCTTTTTTGCCACTATCTATGAGCACCCCCCCCCt cccagcggaccttcaattcacgcaatcacgcaaatcgTTTCCCAAATTCA TCAAATCAAAGCATGTCATCAGAATCTACAAAACTTTCATCAGAGGATGA TACACAAGTAGCACAAGTTATGCTTTGTCCACTTTTTACTGACACATACC AAAGAGTTGGATAGTTCAAAAAGCCTGATTCTTCACTAATGGCTTCAGAG TAATACAAATTTAAGGATACAACACATCTAGTGTACACATTCTACATTCA CTAGCAGTGTTTTTATTTCGAAATCTCAGTAATGACAATTTTAAACCGCC ACGACTCACGGTTTTTACATTGAGTTTCGAATAGGGATACAATCAAAGAC AGAAAATCCCAGTGGTAAAGAAATTGTTGAGTATATTTTCCAATCTTGAC CAAatttcccaatggggatagggATCCTAACGGGTCTATAAGACGGGGGA TGTGTCAGGGCCTCAAAAAAAATACTGAATATATCTATATCTTTCTAAGT ACATTACTCGTTAAATCTCACTTAGAATCAGTGTAATATTGCTCTTTCAC TTTGTgggatttttccaatttttttactttttactttcagTGAAGCTAAC GTGTTACCACAAATACACTCCATGGTCTTTGGATGAAAGTGGAAACCCAG AAGCCTTATCTTACCACAAAATCCATTGCGCTGATTGGCATGTTCTTAAT CGTGTCCGGTTAGAACGAAACATGTTTAAGAACAGATATAGATATTACTA CCGCTGCTGCCATTCACAATTACCCTGTGACGATTCCCAAACGAAAAACA AACCCACACTCAATAACGGTACAATGGCTTCACTTAACCAACAACCAGTC CATTGTGGAAAATTTGGAGTTAGTTATTTGAAATTGAATACGATTATGGA TAAAAAACAATATTTGAGTTACACATTTGAATGTTGTAAACCGAGGAATG AACTAGCTGGAACTATATGTTATAAGGGGAACACAGGATTCAAAAAGGAG AAGGCGCTTGATGAACATTCGATCTCATGCACCAAGGATGATCGTTACTT CATTGCaaattttaacttaaaaatCAACCATACACAAGACAGTGTCCGCT ATGATTATGAATGTTGTAGAATCGACCCAACCGttaaaaacttttaactt tgtattttttgcTAGACCTTTACAGACTTGTTTTTCTTTGGAAGGGATCA TGAGACGGTTTCAGGGGGTACAcaaaagcataaaatttgtcgagaaaatt ttaaacaattttaatATTATGTATATATGGGATGTATGCGAAGCTTAATG TATGTAAGAGATTTTATCTTTATTCAAGTTTTAACAATGAAATGGAGTTT CCTTCCCAAGGaaattcatttgaaatttgACCTTAGGTTATTTGATGTGT TAGCAGTGGCAATAAACCTCTAAATAAAGATAATAAACGGAGAAAGTTCG ATGCTAAGAAATCGATAGAAGTCAAATATTAATTACATTTTCCAATGAAA ATCGACTCTTTTCTAATTTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070802TCONS_00070802Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070802-proteinTCONS_00070802-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:461029..467900 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.41 0.47 0.33 0.62 0.13 0.15 1.4 2.74 14.6 5.56 13.26 18.36 3.89 3.76 5.37 4.82 0.63 0.97 2.25 3.16 0.28 0.17 0.25 0.22 0.31 0.26 0.08 0.09 0.15 0.11