XLOC_044041 (gene) - C. hemisphaerica

Overview
NameXLOC_044041
Unique NameXLOC_044041
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:151187..153968+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044041 ID=XLOC_044041|Name=XLOC_044041|organism=Clytia hemisphaerica|type=gene|length=2782bp|location=Sequence derived from alignment at scaffold_58:151187..153968+ (Clytia hemisphaerica)
gcattttttgataAACTTCAGATTacttaatatatattttttcttttttc
agcaaaaagtaaacattgaaaatgaaaattatagtAAAACAGACTAAAAC
ATATTAGCATTTTATGAACAGTTATGAGGTTAATCTGGTTGGTTTGTCAC
GTATTATGAAATCTGTGTTTAAAAGTGTAAGTAAAATGTATTCAAAATGT
GTATAAGCTTGCATTGTGAAAGCTGTAAGTGACAGcactttttcaagttt
ttgttgtTATTGCCTTTTTAGTGTCTGAAAGTTTCCATTATATTCCTGTT
TGATTTTACTAAAAGTTTTTCGTCTTTTAAAAATTAGGATACTTTTTGAA
CAATCatttaattcatttttcaatacaacaaatttttttactGACGATGG
TACTCTGTTGAGGCCGAAacgtttaaaaataaatttcaaaaaatgaacca
aaagcaGCTTCTGTTTTTTACTGAAGATGTGTGGAAGGAGtgatttattt
aattatttaaaaattattttacaaaatgattACATTCAAATATTAGGGCT
AGACCCATCAAATCGAAAAGTATTAGGTCTTGAATTAGTGATAACAGTGA
ATTGATTGATATACACTCTTAACATTAACCTCTCTCGTTTTCTAATTTGA
CTGGTAATAATATaacattttgtttagaaatatgaAACCTTTTTCATCAA
CGTGTTGATGCGAGTTCAGAGAAGAATGTAACTCATTCTGTTGAATAGTT
TCGTATTTTGACGAAGTTTCtcttttatacaaaaaaggATACTGACTGGT
TTTGTCAAGatgttttatttcaatattcTGGCTATTTTGTTgttacttta
cttttttaaagGTAAGTAGGACTTTAACTATAATTATATTTACTACTTAT
TTCGTCCCCTATCTCACTGATCTCGCATCAATTTTTATATGAACCTTTTG
TCACAAGAAAAGCTAAAGTAAAGAAAAGTTTGGATTAAAAAATCCCACtg
aaaaagttttaattgaaacttacaatgtatagcaatgtgccctcccggtt
attaccataatggctttatggcaactcctgaacttgggcacatgATGTAC
GGTTTAATTGAAACTTATTGATTTTTAGGAGCCATCGGTCTTGATTGTTA
CATGTGTAGTTATTACGAAGGATATCAATTGCCTCATCCTGGTTGTAAAG
CTTTGGTGGACACGAAAAATTTGACCAAGAGTTGCAGTGATGATGAAGTT
TGCCAGTCTATGTTCGTATTCAAGAGAAGTGAAGCAAGTCAAACTGAAGA
GGATTTTTACAGCGGTTTTAATTCCGTCATGCGTGAATGTCGTCCAAGGG
CAAAAGTAGCATGTGGTGATAAAAAAGACGAGAGATGGTATAATTGTACA
CACCGACCTTTGACGGATGGAAAAGTAACTGAATGCTTTGCGTGTTGTGA
GGAAGGCAGGTGTGGAGCCAAGGTGGAGTTATTTAAAGATGAATGGTCAC
CTACGGATAAAGATAAAGATAAAGGTGCAGGTGAAGGTGAAGGACCCTCT
CCTACGGTTATCGCTCTAGCAGTTGTGATTCCTGCTGTTGTTTTGTTGGC
AGTTGCCGTTGCTTGGAAGAAGAAACTTTACCAACGTGTATCTAATTGTA
ATAATTAACATCTTCATGTCAAATTGTTGCACTTTTAAATCACATCTTGA
AGAATTTTCGATATGATCAATCTCGAATTCTGAATCTTGATAGTCATAAC
ATGCAAAATTTGTTGTTACCTTTGTTATACTATGGGTGTATGAAATGTTA
AATATTGTGGAACATGTATTTTTGTTATCAATTTTTAAGTCcatttataa
aatttataatatataaaactCCCTCCAAAGGGAGGATCAACTGACGAAAA
TGCCAGTTATCTAGGATTAAAGATTAGATTTAAAAGTATCTTGTAAATAA
GGTCTACTATACTTGGCGGTCCCTACATTTTATGGATATCTAGAGAAAGA
AAGCTGGTTAAAACAATatttaaaattggcaaaaatgttCAAGATGATTT
TGAATATAAGTCGAAAAGTGGGATCGAGTTGAGAGTTCAACCGGTGAAAA
AGTCATTGAGTTAAAAAAGCCCGGATTTTCCTTGCGTTCCATTCCAGGAA
ACTTTACAACtaatttttaagtattttttgtaagaaaattcTTTACAGGG
GTATTGATTAAAGTTTTGTACAAAGTAGATGATAAATTATATTTTGTAaa
gagttttatttttaaatgacaTTCATCCCTTTTAACCCTTACCCAAGTAT
GGAAAAGTAACATCCAAACCTGTTGGTGAGCTTTTCCAATATGTAATGCG
TTGTTTTATAAGAGCTTTTTGAGGCCTTCCGgtcttcttaactttttgag
ttttaagcttaaaaaagttcttaacatgttcttattttcaccatttttag
agtattttagtccattttgccaagaaatcggctgttttagagtctgcgat
gccttaaaatgttcttaacttgtacttaagattttggccatgtttaattt
ttataaaaaaccgtgTATGCGTTAATTGGCAACTTATTATCACGAAAATT
AATTTCACCGAAATCATTTTTCCTCAAAATAGAGTACTTTTGTAGTTTTC
TCACTACGAAATTAGTACATGCCAAAATTAGGAAAATTTAGGAGCTCTTC
TGCTTATCatttagcctggagatccatgctatgatttcttattctatata
ctgatggcgaaatataccgggtgcaccaaaNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070771TCONS_00070771Clytia hemisphaericatranscript
TCONS_00070772TCONS_00070772Clytia hemisphaericatranscript
TCONS_00070773TCONS_00070773Clytia hemisphaericatranscript
TCONS_00070774TCONS_00070774Clytia hemisphaericatranscript
TCONS_00070775TCONS_00070775Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070771-proteinTCONS_00070771-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:151187..153968 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.72	12.43	6.83	5.45	20.33	14.4	16.24	19.33	14.6	18.07	16.56	10.89	20.41	16.52	37.51	28.72	19.72	23.83	31.07	30.81	18.78	21.4	18.25	22.71	18.63	24.08	28.56	25.66	32.25	30.88