XLOC_043266 (gene) - C. hemisphaerica

Overview
NameXLOC_043266
Unique NameXLOC_043266
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_5:209565..214109+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043266 ID=XLOC_043266|Name=XLOC_043266|organism=Clytia hemisphaerica|type=gene|length=4545bp|location=Sequence derived from alignment at scaffold_5:209565..214109+ (Clytia hemisphaerica)
TGGGAAATTGTCTCGCTCATTCAATTATTCTTTAGAAAACAATGACATGG CGCCAGATAATCGAGCGCCGTCAAAACATGAAATCGAAAGAagaagtgaa attttttttttcaaagttttgatttttgacacAAAATCATGGTTGCCTGG TATTTTGATCGACTGCTCATTTTGATGTGAGCAAGAATGTCTTGTAATAT GTTATTTTTATGATGAACTTAAAGCTGGCTCAAAATATCAACATgagatt ttcaactttttgctgTTCTTTGCTTTTTGTTTTTGCAATAAACTTTGATC TCGATTCCTTCGTGAAAGCCCACGATGAAGATTCTGATGGGATTGAAGAG GATGAACATTTGGTTCATATTGGAAACATTGACAAAGACTCTTGTACAGT TGATAAAGAAATGGAGGTCACTTTCGCAGGCGTGACTGTGGTTTGTGGGG AGAATTATTTTTTGGCTGGGTTCAATAAGAAACCGAAAGTGGTACTTAAC AGAGCCAATATCGTAAGCACATTTTTATAAAGCcctttgaagtcaaaaag attCTATACACTAATGAAAGAATAAGAGAATAAGTCTAAATGAATAAATC AGAGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNccccccccccccccgggatcgTTGCAAAGCAAAACACTCT CTAACCTTAATAATAATGGCATTTAGAATTTTTCGGTTCTCTAATGTAGT ATGACGGCATTTGCAATTCTAACAGCCAACCCAAAGCTGCAATTCAGACT AATAAATAAGCTGTCCTGTTTTGTTTTCAGAATATCTATTACACACTGGT GATGTTAGATCCCGATGCACCGAGTAGAAAAGATCCTTCACAAAGAAGTT GGCTTCATTGGCTCATTGTAAACATTCATGTAAGCAAAGTATCGAATGga aataattttgaattaaattaaattaaaatagctggaaaaaaattcaagaa aagttTTGGTAAATTTGGTAAACTTCTTATAATCAAGGCTACTCAGAACT AAACTTGTTATCAATGAATGGTCTAgtaattcatgatatacaccattgca atgtcttctgatattacatcatggacccaatagctgattggttgtaagtg acgtaaaatcagtcaatacgtcacactttcaaccaatcagctattgggtt cgtggaagacattgcaattctgcaatggtgcatatcatgaataccagATT CCAAACCTTTTTTCTAGAATGCAGACATTTCGACTGGATTTGAAGTCGTA GGTAAAAACATTTTACTCCATTAAATCTTGGTTATCAAAAGTAAAAGGCA AACGGAATAACGAGGGATAACGGATAAATTTCCTGATAATTTCCAAGTTG TTAAAAAGAGTATGGCttgtagtgtggtcgtgttacaaaaatacagactg tttgtaggaaaaaataagatttagctgaaactttctccagaccttctcta taggatgcttatatctcaggaaaaatcccctaaaatcccactggtggaac atctcttttttgggcaatttcttttttccccaggcaaaatcctaagagcg aaattttttgaaaatttcaaacttatttccagacgaaagctctcgaaaaa ctatatagaagacttttaaacggttatagccgATTTCCTTACATAACTCA AGACCCCACTATAATGATTTTGGAGGTATTCGAATCTCGTCAGAACATTC AAATGAAAACGCAAAACTTCCGTGGTCGAGTGAGGTGCAAGTTATCACAT GTGGATGAAATATTTACttattatttatcttttttcagAATACAACCCAC CTACACCACCCAAAAACTCCGGTTTCCATCGCTACGTATTCCTTCTAATT GTTCagccaaagaaagaaaaagaatatcttCCAATCGTCAAGCGTGGAAA GTTCAACATCAATAAATACGCAACTAATCATAGCTTGACAAATCTTGCGG GACTAAcatattttcaaactaaaaaagaaGATAAACTCCAACTTCCAGCT AATGCAGATTGAGTGACAGAATAACAAATATGATATTTTAGGAAGTATGT TAAAGACTTTCATTTGCAGTCGAAGAATTATTTATaaagattatattttt atacataactatggtggcccataagtgccaagtaattttttcttgaaaaa ctcaaaaaaaaatttttttatacatgaaaataactttcattCTACAATTT AAATTGGCTctcatttcaaaatcaatttaaaagtaatttcgttttcaaaa tggctttaaaaacaacttaaaataCGACCCAGCAAGGCCACACAAatgat ttaaattttgttttaattNNNNNNNNNNNNNNacactttcaaccaatcag ctattgggttcgtggaagacattgcaattctgcaatggtgcatatcatga ataccagATTCCAAACCTTTTTTCTAGAATGCAGACATTTCGACTGGATT TGAAGTCGTAGGTAAAAACATTTTACTCCATTAAATCTTGGTTATCAAAA GTAAAAGGCAAACGGAATAACGAGGGATAACGGATAAATTTCCTGATAAT TTCCAAGTTGTTAAAAAGAGTATGGCttgtagtgtggtcgtgttacaaaa atacagactgtttgtaggaaaaaataagatttagctgaaactttctccag accttctctataggatgcttatatctcaggaaaaatcccctaaaatccca ctggtggaacatctcttttttgggcaatttcttttttccccaggcaaaat cctaagagcgaaattttttgaaaatttcaaacttatttccagacgaaagc tctcgaaaaactatatagaagacttttaaacggttatagccgATTTCCTT ACATAACTCAAGACCCCACTATAATGATTTTGGAGGTATTCGAATCTCGT CAGAACATTCAAATGAAAACGCAAAACTTCCGTGGTCGAGTGAGGTGCAA GTTATCACATGTGGATGAAATATTTACttattatttatcttttttcagAA TACAACCCACCTACACCACCCAAAAACTCCGGTTTCCATCGCTACGTATT CCTTCTAATTGTTCagccaaagaaagaaaaagaatatcttCCAATCGTCA AGCGTGGAAAGTTCAACATCAATAAATACGCAACTAATCATAGCTTGACA AATCTTGCGGGACTAAcatattttcaaactaaaaaagaaGATAAACTCCA ACTTCCAGCTAATGCAGATTGAGTGACAGAATAACAAATATGATATTTTA GGAAGTATGTTAAAGACTTTCATTTGCAGTCGAAGAATTATTTATaaaga ttatatttttatacataactatggtggcccataagtgccaagtaattttt tattgaaaaactcaaaaaaaaatttttttatacatgaaaataactttcat tCTACAATTTAAATTGGCTctcatttcaaaatcaatttaaaagtaatttc gttttcaaaatggctttaaaaacaacttaaaataCGACCCAGCAAGGCCA CACAAatgatttaaattttgttttaattctcatttacttttcgatatcat tttaaaaagcattttgtttttttttattttcaaaatcactTTTCTCACGT AGCCCATCAGTGCCAAAGacataccgtgaaaagcacaggtcgaaatcata tatcgacgctgtgccgacgaatcgagattctattcagcgcgcaatcaacg aagataaaagtaaccatgacgaccatccaagatcttggatgaagttcaaa gttgatatttttattcccgtcgttgaaaacgcaactaaaaaatatcatca atgctttttaagaagagtcagtgatagagaatcataacataaagt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069418TCONS_00069418Clytia hemisphaericatranscript
TCONS_00069419TCONS_00069419Clytia hemisphaericatranscript
TCONS_00069420TCONS_00069420Clytia hemisphaericatranscript
TCONS_00069421TCONS_00069421Clytia hemisphaericatranscript
TCONS_00069422TCONS_00069422Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069422-proteinTCONS_00069422-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:209565..214109 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.72 1.16 3.69 3.07 93.53 67.42 37.62 38.8 44.21 32.74 69.66 47.42 7.22 8.96 8.58 10.59 7.57 8.47 16.41 12.55 12.13 10.34 7.24 7.78 9.8 12.8 1.06 1.72 3.84 3.8