XLOC_042186 (gene) - C. hemisphaerica

Overview
NameXLOC_042186
Unique NameXLOC_042186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_471:43764..49927+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042186 ID=XLOC_042186|Name=XLOC_042186|organism=Clytia hemisphaerica|type=gene|length=6164bp|location=Sequence derived from alignment at scaffold_471:43764..49927+ (Clytia hemisphaerica)
ttttttttctttggttGGAGTTTGTTACGTTGGATTTTTAGGAGTAAGTT
CCAGAGGCTAACAAGGAGTTTTTATATACATTTGTTGCTTTTAACTTTTA
AGGTGTTGAATAACCAAAAATCGAATATTATACTGCTTGTATTCAGATTT
CTAGAACCCATTACTGATTACCGGTCTAAATTTTCAATAAGCTCCAGTCA
TTCATGTCTTCCGATAAAGGGGGATATTGCAGACCGGTATGCTAAGCACC
AAAATTTCACTCTTAAATCATTTTCTGAATACATACTGCTTTTGACGAAT
TGATTCAATAAAGaaataccgtgaagtcgggtaacttgcatcagcagtgg
agggaaacttgcatagccataaAAAAGACTGATAAACCTGATAGTAGCTC
TTCGTagttttcttacgcgcacggtaaacctctgaaggcgcttgaaaatt
atacatctgaggaaaatagtcctcccgcggaaaattctacaacaagaatc
ttgttgtgcgccagaaagttaaaaactgatacggcgccctattcataatc
acaatcacgcaactttgtcgtcgttcctagtccttttagacgaacgcggt
ccttacgatttcgagattgcatattcgtcagatttttatgtttttacaca
tccctttagagcttcagcgtggtgtgcagaaaacattcaccatctgatct
caggttaatcAATCAGtcgaccaatcaaagcagcaaattttcaaaacaaa
tgaactacgcagcttcgctcgcagctctactctaccatttttgttttgat
ttaactttgtattttaatgaccagccaggtcattcatttgagggatatgc
atatgttagcctccactgatgcaagttacccgatctcacggtaccaaatc
aatgatccaatgatccatTTTACAATCCTGCCTGTAAACTGGTAGTAGCG
TAGACGGGGTGAAGGAACATTTGCTTACCAGCGGATACCCcattaaaacc
tacaaaaatagAGGTACCCTCTATCTGAAAATTTATGTGGAATTtcaggc
tgaaactttttgtgttgaaagtacaCTGCCAATTGTTTTCTTCCCTAGAA
GCAATGTTTTGTAGAAaacagttttcattttttcacgaaaaagtgaaaaa
atacttttttaactatttaccccttaaaaccttcAAATGGTTTTTCTCGA
ATAACTTTTTTGGTCCCCAATTTGGACAGTCattcactgcaaagttacta
atgttaCGATTAGATCATTGGTaacctaaatattttccaaaatgtACGTT
AAAATCAACTTACACCTTAAATTTGCGATcaatagcacccattctcaggg
attcacttatggatttttagTTGACCTATACCTTAATGTTTCAGGATCCG
TTTGTGACGTAAATAAATAATAATCTAAAAATTAGTTATTAAGGAAAAtg
tgaattatgacgtcatcaaattatgacgtcataaattgtgaaatacctta
tcggccaaaacttagtcggccttaattttagtcggccttaattttagtcg
gccttaattttagtcggccttaattattagtcggccctaattttagtcac
caagccaaaatttagtcacttagggccgactaagttttggccgacaaggt
agctctaactctataagtaccagtggatacccctgttatgcgcagttttg
taattttgacaaaaaatcgaccaaattttcctttaaaatagTAGATAAAA
ATcctaaagattttttgtaaCGGAGTTAAATCGAGTTAATCCgagtttta
agttttgaaatgtgGCATAATTAGTTTCAGCGTTCTTGATTACAAAAGga
attaactttttgaaaagtataCGTGATGTGTGACGATTAAGAataattca
tttcaaaattccgAGTTGAAAGAGTTATAACTCGGCATTACGTTTTTGGG
TTTTGTTATTAAATTTATCAACGAAAATGaacattttagccaattttaaa
GTGCTAGGAACCCAAATAAACAAATAAGTCGTGAGCAAGGGGTcgatttt
tgtaggttttaaggtgtaatagtgtaggttttaaggtgtaatttgatttt
aatgtacagttttgaaagtatttaggtaccaatgatctaattgtagcatt
acagtagtaactttgcagtgaatATTGCAGtgactttttataaaaagtta
ttcaagaaaaccattctGTAGGTTTTAGGGGCGAATagctaaaatttcat
tttttcacgAAGCCATAAACCATACCCAGGGAAGGAATTCTAGATAAAAG
TTTCATTCCTTTCTGTTTTCTCTATCAGGATATAGGGGCTACCttttttg
ttgtaggttttaaggggtatccactagTAAAGGAATTCAAAACACTTCAA
ATCTCATAACTGATCTTTTGACTATTGTCAGAGAGCCCTTAGATAAGCTA
AATTGCTTTTTCTTTCGAATAATTTTTGTAATCTCATCGTCGTAATCGCG
TGTTTTGGGTTTTACTATAGAAATCACATTAAATTTGAACTTTtcttatt
aattttttgataCAATATCTAATTCGATGCGACTTTCGTTtagacttttt
aaaattaacaCAGCTTGGATATGATTGAATAATCTTGGGTGAGAGTACGG
GTAGTACACGCTGAGATTCACATTCTAGATAAAAACATGCTTTTTGGTAC
CCGGaacttttagttttagtttttaaagtgttaatttttgttaaaatgtt
TAGGGGAAACTAGATTCTCTCTAAATCAGTAATATAGAAGACAAGGGGAA
GAAAAGTCTCACTTGAAACTTTAcgttgaaagtttgaaaattgatttact
ctttttatatttcacaggtTCAATCACTGAATACAAATGTATCATATTGA
TTTCAGCCCAAAGCAAAAGTGCAAAATCAAAACGCAATGAAACAACAACA
ATCCAAAATGGTTGACAACAAAGTCACCATCCGACGAAAAGATAAACATG
TTCCAATTCCGATCGAGGAATTGATCGATTACTACGGCTTCGGTAAACAC
ACCATCAAAATGGTCATTCTTTTGAGTTGCGTTTGTTTCGCATACGGAGC
TCTTACTAACATTCTTGCCAACGTTATCTTAATCAATTGGGCGTGTGAAC
CGGGCGATCGGGCGGATGAACCGCAACTCGTATGGGCAACTTTATGTATT
GGTTTGGCCCTTGGATCGTTTTACTTTGGCTGGTTGGCGGATCGGTACGG
GCGTAAATTAATGATTGCAGTTACGACCACACTCAGTTTATATTTCACAC
TACTTTTATGTGCTTCTGAAAGTCATTTCGATGctttattaattttattt
ttcacagCGTCTGGCTTGAGTGGCGGAAGAATCATATCAAACTATTCTGC
AGAATCGTTCCCTGTCAAACACCGAGCTAGAATACAAACCGTTTTAGGAT
TATCATCTAGCCTTGGTTCAGTTGTTTATTCGTATCTAGCCTATACTCAG
AGACTGGGCTGGCGTCATTTCACCCTTACAGCAAGTGCACcgttgattgt
ttttattgttatacCGTTTTGGCTACCCGAATCTATACCGTATTTACAAA
TGACCGGAAATGAAGACGAACTATACAGAGTGTTCCAGCATTTAGCAGAA
AGTCATGGAAAGAATTTAAAACGAAGAACTTTATTAACAGCGAGAACCAT
CAAAAATAGAGGCAATCTCCCGACCTTGTTTTCAAAATCTACAATTTGTG
GAACTTTGATCGTTATGTTGCTATGGGCAACGAGTCGTTTATCCATGAGT
GTTTCGACTGTGCTTCATTACAACACTATAGTGTTTAACAAGACAACATG
TCCAGAAAACCAAGTAGATATTCTACAAAGCTTGTCATTCAAAGAAGTAC
TCAACTGCAAACACAGTTCAGATGTCTTTTACGTTTCATTTATTGGCTCT
CTTGCAGAATCAATTGGTCTCGCaatcacttttatttttatcaatcaTGT
CAGTCGAAGATTTGCTTTTATATGCTTGTTACTCATCAATTCGGCGGGAT
TTATTGCTATGAATATTTGCAGTGTAGCGACCATTCATACAGCTCTGGTT
TTAATAACTATGGCAACAAGTGCTAGTTTCTTTCAAGTACTTTGTATTTT
CACCAACGAATTTTACCATGCTTCAGTTCGTTGCACTGCAACTGGGATGT
TCAATTTTATATCTTTATTAGCCTTGGTTTTGATCCCGATTTTGATTAGC
CTGAGTTTTGCATTGACTCCGATTGTAGTGACAGTGTTTTTTGTATCCTT
TNGATCGTTATGTTGCTATGGGCAACGAGTCGTTTATCCATGAGTGTTTC
GACTGTGCTTCATTACAACACTATAGTGTTTAACAAGACAACATGTCCAG
AAAACCAAGTAGATATTCTACAAAGCTTGTCATTCAAAGAAGTACTCAAC
TGCAAACACAGTTCAGATGTCTTTTACGTTTCATTTATTGGCTCTCTTGC
AGAATCAATTGGTCTCGCaatcacttttatttttatcaatcaTGTCAGTC
GAAGATTTGCTTTTATATGCTTGTTACTCATCAATTCGGCGGGATTTATT
GCTATGAATATTTGCAGTGTAGCGACCATTCATACAGCTCTGGTTTTAAT
AACTATGGCAACAAGTGCTAGTTTCTTTCAAGTACTTTGTATTTTCACCA
ACGAATTTTACCATGCTTCAGTTCGTTGCACTGCAACTGGGATGTTCAAT
TTTATATCTTTATTAGCCTTGGTTTTGATCCCGATTTTGATTAGCCTGAG
TTTTGCATTGACTCCGATTGTAGTAACAGTGTTTTTTGTATCCTTTACTG
TACTTTGTTGTTTCGGCTTGTGGTGGACCCGAATCAAAACAACATGAAAT
TCAACGTGTTTGActtgattttgaaattgtttaGATTTATTCATTGCCAT
CAAAGACTTAGTTGCCATGTATAATTTGTGAAATATTCCaatataaaaaa
gtttcagtttttatgatattatattttaatatactactttaggcgtacaa
acttttgtgagcagaaactttcgtgagTTCAAAAAATCTcgaatttaacg
aaaaaatatttttcgcgagcataaactttcgcgtaTAGTATCCAGATTCC
AGACacacagccaattcgattgacttccaaatttgccatactcaccaact
ttgccaaatctacaatctcaatgtcaaaagatcacagcttcatggcaaat
ttgtacatcgctacGCCGCGATTATGATttccgttttgtgatgcttagtc
agcagttttctgtcggcgtttgtaaagcgaacgattttttaaccaatcag
attgccgatcggcattgttttgctttagcattggaaggtcttctattttt
caaaatctttggcaaaagtggcaaaattggaaaaaagaaaagaaaagaac
agaggtctcgtgggaacagtgttttgtatggagacgtatggaggtaagtt
ccaaaaatgccaagaatgccagattcaccacatcttttttatttggcatt
tatggcactcaaattttgccacatttgccaaatttttgtcaatcgaatgc
agaataattggcaatcagggcaaaaatggcatattttgaagtcaatcgaa
ttggctgacAGTAGATCCCTTGGATCTGCTCACCCAGCTCAGACAAAAAC
GCTCTTAGTTATTCGAatttcagttattcgaagcgATTTAATTCCCCTTA
GAGCCAATTTTAAGCTAATTCACCCTcagttattcgaatttttcttattG
GGAGATCGTCGAGTGAGaacattgattttctgtgattaaaaaacttttat
tcttcaaaaaaatcgTCAAGTTTCAGAATTCATGGCTATTTACACTCTTC
AAGTAATTTGAACATTCTccaacattttctttataacttTCATATTTTAA
AACCTGTTAataatttgttcaaatttattCTCTCTTCAAAAAAGTAGAAA
TTCTTTGTCTTTATCACGCTCAACTGAACCACAATGCCTCAATTACTTCA
GAAAAGTCCATATGGTTAAGTTGGTCAGTCAGGAagaaagacactttttt
attctgctactggcagtttcatgccacttgggtgacaatcttcaggcaTA
TGGTTAGGTTGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067544TCONS_00067544Clytia hemisphaericatranscript
TCONS_00067545TCONS_00067545Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067544-proteinTCONS_00067544-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:43764..49927 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.33	1.5	2.14	2.94	4.45	3.23	6.3	7	2.64	3.1	3	2.26	2.48	3.05	2.16	2.55	1.89	2.17	3.3	3.34	2.75	3.03	0.94	1.41	2.39	3.11	3.02	1.71	1.15	1.33