XLOC_042072 (gene) - C. hemisphaerica

Overview
NameXLOC_042072
Unique NameXLOC_042072
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_469:42834..50247+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042072 ID=XLOC_042072|Name=XLOC_042072|organism=Clytia hemisphaerica|type=gene|length=7414bp|location=Sequence derived from alignment at scaffold_469:42834..50247+ (Clytia hemisphaerica)
ATCTAAGGTTATGGTTCAGCTGAATCCTACAAGACAGCCAGTGGtaagtt tcaaaagtttcaaaaattttcagtcTTTTTGTTATTTGTGCATTTTGCAC TCTTAAAAACTTGTTTGGAAAGTTTCATAATGAATGTATTTAAAGCATTT GTGAAGTATGCCACACATGCCCTGTAATGTAGCCCAAAATATGAAATAGG GCTCACTCTTTCTTGTATATAAGTAGAGGTTTATTGTATTGGCTAAATCc aatctttctgatttttcatgATGGTAATGGCTTCAGCAACAGATTTGGTC ACCAGGAGAGACCTAGCCTGAAGATTGATGCTATAATTCCTTCTTTTAAT TAGAAAAATGGTTTGGCATTTGGGCTgttagtttgaatttcccagctCCG AAGGATGACAGTTTTGTtcttcaatttgaaataaacctAACCTAACCTAA CCTAAAAACACAGCTAATCAAATTCTGCTATTATTTCACTTGTCATATTT TCTGAGAAATACTTATGCAACTTCCTTAACCCTATTTCATACTAGTCTAG GCTTTTAAGGGGCAGTTCAAAACTAGGGAGGCTGTAACACCCCTTAACTT TTTTGAtatagtgggtctttttggatgataTTGTACTAATTCTTCTAACg caaattctaaaaaattcacCCGGAAATTTAGTACCTGTATACCTATGATT CTTAGAAGCATTATTTAAGATTTTCAcagttgaattttgaaatttttcaa aagctaccagtcaggctagctctaaagctctgaAACATAAGCTTAAAATC TTTTCTCTTTCTGCTAGCTTTGAGTACTGTATTTATTTTATTACTTCTAT ATATCAGATCTAGTCTTAAGCACAATCTACCACAGCACCTTCCATGAAGG GCTAGGatgacaatcaaacaaaggattttctgtcaagagccttgtaaaca ttccagcAACTTCTATCGAAATGATCTGCTGAAAACACTGTGtctgaaac actttttctgaacctttcatgcttttttgggtgttttggcaAAAATTAGT CCCCATTCTGGGATTTCCATAAATCAACTCTCAATTTTCTCCACAAAACA ATTTTCTCCAAGCCAGAATGTCTTTTCTCTGGTGTTCAAGGTGTTTTCAA GGCGATTTTAAAGCTCCTGCAGTGTCCTGTCTGaaccaatcagataaaaa tcgCGTGAAAAATCAGGttagaaaatcgggaaatttagCCTGTCCAGGAC TTCTTTTAACTTTCAGCTTNTCAAGGCAATTTTAAAGCTCCTGCAACCTG TCTGaaccaatcagataaaaatcgCGTGAAAAATCAGGttagaaaatcgg gaaatttagCCTGTCCAGGACTTCTTTTAACATTCAGCTTTGACAGGACA TTCAATGAGTAAGCaatgtgtttttaaaaacatgaatGGTTCAGGCTCTT TATCTGTCAATCATTTCCTCAAGCAAAGAGTTTGTGAAGCAAATTCTAGC TTTATGAtctattgttaaccggttactttttcgaagcgggctacacgact ttttgcgcgatgcaattggttcttttcgcatgacagcgggcctacattgt ccagagttgcccatcgttaggaaaattcattgtgacgtcactttttcaaa ggaaaatgaacaatgcgttgacatcatttctctcattttttatttatNNa caattttttatctcttttcgcttgtttttttcgctttatttcggTCGTTG CCTCGGTCAaggcaacaacctcgcaagctcggtcgttacttgacctcggg caatatttctcagtacagccctcactaaccggtcattattgtattagtgc tgcggatcatcagtggatagtattcaattatcattatccctttatttcca tttctggaacttttgcaaaaaaaagaaaaaatacaaaagttgtatttttt actgattcaaataccttaagggaacttattttgacgagaactaattttgg caaaattggcaaaattggCGAGCGAACtcgaaattcgccaaatttcgttc ccaccaaaattaattttttaggtCATTCATCAACTTAAAAAGTTctcaac aaaattgaaaaaattgtagattcgccaaaataagttctcgccaaaattaa aaaaattcctggttcgccaaaataagttctcgccaaaatttaaaaaattc ctggttcgccaaaattagttctcgccaaaatttaaaatattttttgaatc gaccgttcgtcaaaattagttctcaccaaaaaaagttcccttaaggtact caatttgaaagatcttttatGTGGCGTTTTTTAGCAAACTTGAGAAAACT GATATTTGTCCGGGACTTTAGCTCAACAAGTGCTTGCGTGCAATATAGGG TACAAAGGCCAAAATGCATTTCCCATAAAATCTATATGGAGAGTTAGGGC TATAATGGCAGTAGTTTATCCTTAAAAAGACATACCCCTTATTAAATACT ACACATGTTAATATCGAGCCCTAAcaatatttcttttgaaaaatctttga aaaataactGTTTTAGAATGACTGCGTATCCTAGCTAttaccgtacatcc tgtgcccaagttcaggagttgccataaagccattatggtaataacgggga gggcacattgctatacattgtatccTAGCTattaaaaatactaacaaaaa tatttctatatttcATGTGAAAAAAGCTGCAGAGACTGCTAATAcgtcaa aattaaatttggaaaatcagGTAAATGATCATGAAACTATCATAGATAGG AAAAATGTAAATTAAGTTTGCAAATTACTTCTTCCAAGTCAGGTCTCtac atgaatttttttgatgGTTCCAATAtctaattttttctgatttcccTTGT ATTTGAAAACCAGTGGCAATTTAGTTTTTCAGGGGCCactgagaaaatgt ttttataaaatttcaatGAACATTACTTTTAACCAAATATAATATAAACA TAAGATGTATAAAAGTTTGTAACTATGGAAAGTGAAATATGAACTATAAC AAGAATACTTTACAAACAGAAAGATGTGTAAACATTGTCAATATCAAATC TTTTGACCTAGCAGTAAAATGTGAAACAATATCTCCGAATCAGGAACAAT GAATGTCCTTGAATATCTTTCTTTGGGTTAACCTCAACTGGACAATAATT AGATTATTCACTTATCAGCTGGTAGATGATTAGGTGTAGCTTTCAATGTT TGGCATCAAACATTCCATTAATAGGGATTTCACTTTGCCATCTGCTTCTA TTAGAAAACCATTCAAAACTTTTGCAATATAAATAGTCACCTTTTTTTCC ACGATATTAATTAGTGAGCTATTTTGCCATTTGTCTGTCATCATCAAAGA CCCAAATAAACAATGACTAATACTCCCTCCAGCTCCCTCAACTCTTAATC AACataatagaaaaatattttgacttttccCTTGTAGTATTTAAAGGGGA AACTAGAGTGTACTTTTTAAGGGACTTTTCTGtctaaaaaaataagtttg ctAGCTCCTACATATTTAACTAGACTAGTATAAAGTTCTGTTATCATTAA CATTGAGCACTGTTATTGGTTTTGGCAAAAGCATATTTAAGTAGACTTAT TCTTGATATAATGAAGAGAAAATTACGCACAAGCAGGGGAAATCTTTATT TCAAAATCCACAATTTTCTACACATCAGAATTCTatgaaaaaagaattat aatgaataatgaaaccTGGAAGAAAAGACAtacaaaactgaataaaaaag agttaaaaatttcATCCCTGCCTGTCCCTACAAGCCTGAACACTACATGA AATTTTGTGTAGTATTTAAGGTAGTCTTTTCAGTCTTTTAGGCTTTGCCG TGATGCATGATGAATAAGCAGACCATTTTCCATGCCTTTTTAACGTCCGG TTATCAGATAATGAATGAGCTTACATGGGCATTGACTAAAGGATTTTAGT ACTCATAAATACTCTTTTGGATGGCCTGTGTTAATGACGGATGTGCTCCA ATAAACAGCCAGACTGTCCTTTTCTGGTGAcaatttcatgaattttcaat gttcatattttgattttgattttttagttgATACTGTTagaaattatatt ttgaaaatactttcaATGGCTGTCAGTGTTGCTGTTGTGGGTCGTGAAAA CGAACCGTTGTACATACATACAAAAAATCCTGAACCAACCCTACAATTTC ATTATATTGTACATACATGTTTAGATGTAATAGAGGAAAAAACAACCTCA TCTACTAAGAACTCGCAAGATCCACGAGAACTTTATCTTGGATTACTTTA CCCTACTGAAGATTTTAAAGTTTATGGATATGTTACAaacacaaaaatca aatttgttatAATTGTTGAATCGATGAATGCAACTTTGAGAGACAATGAC ATTCGAATGATGTTTAGGAAAGTACATTCTGCATATGTTTCAATGATTGG CAATCCATTCTATTCTCCTGGtgataaaatcaaatcaaaacaatttcaaa ttgCTGTTGATAGTATCATGAAAACAGAATAGAGTTTTTTGAATCTGGAT AATTGATTGGGTTCTTTGgcattattatatattttgttttgtttttgtag gCGCTAGTGTTTTATAATTTAATGAATGAATAagacccttttcaaaaaat gctgtTGATGTTTACAGGGTGTCCTGAGGAAGATACTGTGTTACACCACT TCTATAAGTAGAAAATAACTTTtggggacaccctgtatataatTTTAGTT CTCCTGCATAAGTTTTAGTTTcactttcaattcttttttcattttaacaa atttgtgatttttaacattctattttataaataattctcctattttttta tttaaaaaaattatcatttgcAAGATTAGATCCCAATGACCTTTGTTATT TAATTTGTACAATTTTTATTGCATCAGTATACATGATAGTTACCTACAGA CAAGAGGTGATCCAAAATGTACACAATATTTTCGTGTTAAAAAATATCTG GTCAATTTGTTTGGTCTTGTTTGTTTGTCattctttttccttttctatTT CATTCATTTAATTCTCATAATATTTTTTTGCGGTGAAGATAAAAGATTTg ataacaaaaaatgaaaagttttcttcAGAGATGATTCGAAAATCATCTTC GCATAGTGATGAAGCAACGTCAACGAAGAAACAAAGAATGCCTGGATCAC aattgagaaatttttcaatcaaaccTGTCCATAAATTTAATCAAGGTTTC CCATATTTTCGTCAACCAATTGAGTTTGGTCATTTTTCACTTGATGGTCA AAGAAGATTTCACAATGACTCATCTCAATTGAAATCTTTTCAACCCCCTC ATGTGGATTATGATTTGGAATATGATTTGCGGGATGGATATGACAGCCAT ATTGAAAAAGACGATGACATTAAAGAGCGCTTGACCCACCTTTTGACTTG GATAAAAAGGAACACAAACAAGTTTCGATTAAATAATGAAAATGCAAAGG AACATGTCCACCAGtttgtcatacttttttacttttttctgctttttatc TAAGTTTATTCTCTTAAAATCTTTCTCTCTCTCTTGGAATTAAGAAACTT ATACCTGATAATTTTTATGCTGTCAAAgctatttattttgaatttgatga tTTGCTCAATTTTAGTAAATTGTATTTCAAATCCTGAATTTTTTATGAGT TTTCAATCATCTTTTCATTTTAGACTGAATACAGATTTTGTTGCTTGGAG GGGACACTTTACAAAATTTCTCTGTACGCCTTATGAAACACGAGAACCAT GGAAAATGGCAGTGACTTTGTTCAATGGGACAATCTACATCAGTGAAGTT GAAACTGAAAAAGCTGAATTTGACCACAAACATCGCTCACCCAGGCAGAA AGAAATGTGTTACTGGGGGTTTCGTTTTGAGGGATATCTCACTAAACCAA TGCATGGTATGAGAAATCAAACATTGATTGCAATGCTTCATTGTCATCCA ACAAACATTGTTTATAATCTTTTGAATCTTATTGTTAGAAAGTGGCTGAA ctaggtttttctttttttaccgtaaaaatcagattttcttattttgggca aattcccttttgtcatttttgagcatttctcacgattggcttggtattct tttctgattttttaagctTGTATTTTTTCTTACTATTGTTGCCATTTTCT TATTACATTAGCCTTCAAGTAGTTTTATTCAGTATGTTCTATATAATGGA CTCACAATAGACAAAGCAAATTGGTTTTTACTTGACCAGATGAATATTTA AATTTAACTTGAAACACTAAAACTTGTTATTTTACCTCCTTATAGAAGCC TGTGAtgaagaggaagaaaaacaaccaaaagTTACCAACACAAATGAAGC TTATTGCTCTATCGTTCGAACAAGATTAAAGAACCATTCCATCCTCATCG GTGCTGAAGTTGATTGTTGTGTTAAAGACAGCAAAGCAGCTCCTCCTCTC AATTATGTGGAATTAAAAACATCTCGCATAATGCAACATTTTAAACAGCG AATGAATTTTTCACGGTATAAATTGTTGAAGTTTTGGGCACAAAGTTTTT TGGTTGGTTTACCAAAGATTGTGGTTGGTCTGAGAGATGATGAAGGGATT GTCCACGAATTGAAAACAtacaaaacaatggaaatccCACAAGTCTGTAA AGAATTCCGTAATTGCTGGGATCCAAATATTTGCATGAATTTCTTGGATA AGTTATTGTCTTGGTTGAAACAGATTGTCACCATTGATAATAAAGATGTT GTTTATATGTTACGATTTGAACCACCCTTTGACACGATCCAAGTGGAATT GATCGATGATGGATCTGAATGCTTTTTACCAGATTGGTTTATTGAGAGTT TCCAAAGTCAGGAAGaatgaatttttgtaaaaagtactACCATGCATCAT AAAATAATCAAACAATTTATGATTCTGGGTGATGATGGTTTTATGCTTTA ATAGACTAGTCATCGTCCCattgtttcaaattttagtgaCATGTATTGGA GCTGGGtttgcaaagattttcaaaccagggggggggggtacagaggcagg gtactaacccataggatACTAACTTGGTTTTtcactcaatttctttttag taccacccacccatatttagtaccggtactacttcatttttgctgtaaaa aatagagacaccaccccctaaaatcttatattttacagattagaccaaAA GAGAGGGTACTATattagtttttctgactgaaaTGGACAGATAATTCAAA CAAACTATCATTGATTAAGTCAGAggcttttgtcctttgattttaataac acacttcttgacca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067321TCONS_00067321Clytia hemisphaericatranscript
TCONS_00067322TCONS_00067322Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067321-proteinTCONS_00067321-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:42834..50247 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DXOdecapping and exoribonuclease protein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (5.53 tpm) - - (41.31 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.72 7.48 6.22 5.53 41.31 29.34 31.39 34.56 21.81 17.76 16.59 13.92 11.92 9.63 12.55 13.92 13.66 14.05 8.27 9.64 16.32 15.53 24.59 23.39 11.24 22.82 14.52 11.02 16.87 17.58