XLOC_041012 (gene) - C. hemisphaerica

Overview
NameXLOC_041012
Unique NameXLOC_041012
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:566497..573824-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041012 ID=XLOC_041012|Name=XLOC_041012|organism=Clytia hemisphaerica|type=gene|length=7328bp|location=Sequence derived from alignment at scaffold_439:566497..573824- (Clytia hemisphaerica)
CAACACTGGCTACCATTTTGGCATACGCTATCGCCACGGAAACTTCTTCA TCACCCATAACAGCCACTGCCACTACAACGGCGCCCTCGTTTACAGTCCC ACCAGCGCCTTTCCCGCCCTACGATAGTAAGAATAAAACAAAACTCCATA TCGGAGCACTTGTGCCATTCCTCTTGACACGTGACAAATTAATGTTTCAT GCAGCTATGCATACCGCCGTACGGCTGATCAATAATGACACCAATATGCT GAAAAATTATGAACTCGTCCTTGATTATCGAGATTCAACGGTATGTATTG GATTTATGTTAGATACTTTTAGCGAAGAATCCTTCTTTGACAGTTCAAAA TAGAATATACACGAATCTCCTTCAGAAATGTCTAGTTTTGTGGATTTCAG ACTTGACGCTTTTATCTTACAAAAATGAGTTTAACCTTTACTTTCTGTTT CATCTTTAGACTTTGATTGGATTTTCATACCNTATCAGAGATTTTCTTAC AAAAATGATTTTAACCTTTACTTTCTGTTTCATTTTTAGACTTTGATTGG ATTTTCATACCTCATGTTTTACGATTTGGTGGAGAAAGGACCTATAAAGC AAATGCTGATTGGACCAGCTTTCGCTAGAGCAACTCGTGCCGTTGCAGAG CTTACTACGCGATTTAAATTACCTCAGGTAATCCGCTTTTTTGTGAATAG ATTGTTTGTATTGAAACCCACGGAGATGTTTTAAGTTCATTAAAATTTGG TTAGTAGTTGAAATTGCGAAATTGATTTTACGCACTTTTCCGTTAGTCAT TTTTCTGTACAAAGTAATTTTCCTCTCACATCCACTAATGACAATCTAAC AAAGAACATTTTCTTTTTCGTTCTCTCAAACAGGTGACCTATGCAACTTT ACAGAAATTTGGAGCTCGAGAGGTTCCGGATCCAGAAATCCAACAAATTG GAGTTCCACGAGTTGAACGTCACTTCCCTTTCCTCGTTAAAGCAACGCCT TCACTCTCATCCTTCAATGAAGCTATCGTCAAAATCTTCCAAAACTTCAA ATGGAAACGTGTTGCAATCTTGTATGAATATTCCGCTCAACAATTTTTCT CAGTGCGTACTTTTATTATTCCTTTTCGTTACAAACTTTATAAGAATGAT GTTTTTCCATTATTCATTAATATTCTTTTAAGAAGTTAAAACTGGAGAAA ATCATCCTTAATCTTAAAGCATTCTTACAGTATTCTACTCTTAGGTCAAG ATCAATATTTAACCTAAATTTAACATGTAGGATACACATGAAACGTAAAA TGGTATTTAGGCTTACTGGGGATAATTTAAGCGTGTTGCTCAATCTATGC TGTGCTATGCCCATGCGACATCGCATCTTTTAACAAGTTGTAGAGGTCAA GATCTTGTTCGTAAAAGTTCTTGTGTTTTTCGAAATTATGCATATTTTGG AGCTATTCATTTTTCATCTGCATTTTTTCTGTACCTATTCTTTTTAGACT GCGTACGATCTTTCATTACGACTCAAGAGCGCAGGTATCGAGGCTGCCGT TATTCAAGGGTTTTCAGGGACAATTTTAACAGTCGATGCACAATTGGATG CAATCTTGGAGAAAGATGTTCGAATTATATTCGGTATTTTCAGTTCGAAA GGAGCACGTCGGATTTTTTGTCAGGTAATGAAGAATTTATAATCACGGCT ACCGCCGGAGTAAGATTATTATTCCATTATGATTTGCACTTTAAATAATT CAAAATGTGATTCTCCCAACCAATGAGTGTAACACGTAAAGTTTCCTTTT AACCCCGCATTCATTTAAAAGTAAGTCGGCGCTAAGCTTATGTAGTAAAT ACCTATTTTCATTGCGCTTTTGACCCAATGAGCTTTTATTTTACCATTTC CGTCGACATCATTCACATTCACTCTACTCTATCAGAAAAGAAGCTAGTCT AGCTGATATAATGTACAAAAACATCAAATTTAACTCTGCTCTAATAACAT TGTACAGGCTTACAAGCGTGGTATATACGGTTTAAAATACCAGTGGTTGA CTGTTTCCACACTCAAATCCACATGGTGGAAACCTGTTACTTACAACGAA CCACAGAATTGCACTGTAAAACAATATCTCACTGCATCTGATGGTTATAT GTCAATCGCTAACACCAATGTGAGAAGAGATGGTGTTCGTAGCATTGGAG GACAGGTACAAATTTCATCATCTTCATCGCCCGAGACTCCATATCTATGA TCATCTTTTTAATATCTTGGCATGGAGAAATATTATCTTTTCTAAAATTC TTTTTTCGTCCATGTATGGATTCTATTAAATTTAAGAACGCTTTGCATTG GCTGTTTTGTTAATATCTGTATATTGGAAGTTGAAATTGAGACAGGGGTG TTTGAGTCACATCAGTCTATCCTTACATTACGGCTATCATTATTGTCAAA AAACGAAAGAAAAAGTTGGGTTCCAAAATGTGACTTGATCAATCCATCAA TGGTTTGTGACTTTTCAGACTTAGTTCCTACCTACTACACTAACTAACTT TGACACGTTCTTGTTGTTAGACTGCTGAAGAAATATGGGATCTGATGAAA CGTCAGAAAGCACACGATTACTTCCGCTACATGAAAGAAGCAGGCTTATC CAATGAACCACCTCCCATTGATAATGAGATTAAAGAAGAATCTGCTTTCG CTTTTGATGCTGTCTATCTAGCCGCTATAACACTGGATAAAATCATTAAA ACAAAAGGTTAGTAAGGTTGACTTTGGCTGGCGGAACCTCTAGGACTCAA ATCTATCAATTATTTAAACACACTTACTTTCCAAAAGCCCTTAAAAATGG CACTCTACTACTCGAACTCTCCGACCAGCAAGGCTATAAGTAGCATATAT CAGAAAAATAAAGATCAAAATGACGTTTAGTTCTATAAAATCTTTAATGA ATCAAAACTTTAATGAACAATACATAATTATCTGGTATTTATCAAAACAG CTCCTTTTATCGTTAGGATGAAAGTTGCAAAACAAACATTGTGTGCTAGC TAGGAACTTAATGATTATTTTCAACCATAGGAAAAGGTGCATTGATGACG GAATATTTCAATGAAAGTCAAGCACTGTATATGACGGACGTCATGCTCAA CTCCTCTTTTGAAGGACTTACGGTAGGTGGATTTAGATTCATTGTAAATA AAAAGTCGCAAAATTTGCTTATATATGCATGGCCTTTGCAAGTAAGTTTT AAAACAATGTATTCTGTTGTGTACAATCAAAGTCATAATATTTGGGAAAA AAGGGAAATTTCCACGAAATCTTACAACCACAAACGATTTGGAATTTGGT TGGAAGGGTAGACTTAAAACTTACGGCCTTAGGATCTGAGGATCCAAAAG TCCAAGAATGGTCCAATAGGGCTCAGAATATAGCCTGGAAGTCTTTAAAC CCCACCCGAATTGAAATATTCGAATAAATTTATCAATTAGCCCAAAAGCG ACTTTCTCGCCCGAACTTTAAATTGCTAAAAACGAGGAATTAACGAAAAT TCTCAATATATTTTGACCGAGGTTGCAGAGTATCTTATCTGATACGGTGT TACCGTCATTTCATTCTAGCTTCTTACTATTCATACAAAATAAATGCTCA TTCTTTAGGGTCGCCTTCACTACGGTGGCAAATCTGGAGAAGAAAGACAG GGCATTGTGCGCATTCAACAATTTCGTTCCAACTATACACAAGTCACTCA CAATATTTCCATCAGCCGTAAGTCTATTTTCTGATTTAGTTCCTTTTTTG TCTAGAAAGGTATAAAGTTCATAAATTCCTATTTCTATAAATCCAGCCCC TGTTTTAACTCGTCAACTGTATTTCTAACATGACGATGAACTTACTTAAT GTTTCAATATTTTGCGGATTTCAGGTGCTGAACTTCACGATATTGGACAC TTTGATATTGAGAGCAAAGTGATTGACATTTACGACAAAACTGGAATGAC ACTTTTTAAAGGTAATGCAAATGAAATATACTCCCCAATATACTCAATAT GTACACATCGTAAACATGCAGAGAAATTACCTCTTTGATCTGTCATATAA AGTCAATAAAGAGGCGAGAAAAGTGATCCACCCGCGATTTAAGAAAAGCG TATCCTCAGTTATATTTCTGTTACATCAATGCAATAGTCATGCAGAAGCT AAAAATTCACAACCAATAACATTTTAAAAGAAATCTCAACTCAACTGTTT TAGCCGCGGTGACTAAAGTCCACATAGTCAGTGGCAAAGCATTGAAATAT GCATATGCGAATCATGCAAGTTTGATTTTTGCTTTCCTCTTTCCTACAAT TAATTGAACTATCGAAAATGAGATGTTCGGGTTATCTCTCTGGAAGAATA TTAACAGTTGATCGCACGCTTTGATCATCCCTTATAATTTGATTTAGGTG GACGAGTGATCAAAGACCGTAAGACGATCAACCGGATACCAGAGACATAC TCTTTGACCACCATTGGCATCTTGTGGGGTTTAGCAGCCGCTGGATTGGT TCTTTGCATCTGCGTCTTGTTCATTAATGTCAAGTATAGAAACATAAGGT AAGCAAGCTACAGTGACCACTTTGCTCGATAAAAAACCACCAGCTTTTAC CTTTTTACCTTCTCCTTTTGACAAGTACTAAACTGGGACTCGAACCTAAT TTTTGCATTACTGGAGTTATTTCATAACTGGCTTTCCTCACTTATCCAAC TTTAATTACCAAAATTTTTAATTTGATTTTTCAGGATGATCAAGATGAGT TCTCCCAACATAAACAATGGCATTATAGCGGGAAGTATTATTTGTTATGC GTCTGTGGTTGTTTATGGGCTCGATTCACGCTTCTTAACACCCAGAGGAA TTGGTATAGCTTGTAACGTAAGTAAAGTTTAATTACTTGAATTTCATTTC CTATTGTCATCTTCATTTTTCTTTACCCATTAAAACTAGAAACAATCACA ATGGGGTTAAACCGAAAGATTTTCTTTTCCTAAAAATTAAAGTTTTTTGT TTAGCTAACTTTTAATTTGGCTGATAAGTCTGCAGAAGTCTGTAACATTT TATAAATAACCCTTGATCCTACCAATAATCTGATGCTAATGCGGGTCGTT TGCTGTATCTTTAACGCGATTCTCAATGATCGTATACTAACTCTCTATAT ACTAACTCAAAATTACCTTTTTCTATCGTTGAATTTCTTTTGACATCTGG TTGTTTTATGTATATTTTCAGGCAGTGACCATTGCTCTCTCCATCGGCTT CACCTTATCTTTCGGTTGTCTCTTCACAAAGACATGGAGGATCTACAAAA TATTCACAGCTGCAAAAACCATGGAAAAAGTGGTAAGTGTTTCTATCTAC AAATGCGTGACTGTATTCGTGACAATCTTTTCCCCAACAATTTCCATAAC TCTAGAATATTCGATAAAAATTTGGGCCAAATTAACTGTAAATAGAACCG CTTAGGTGACCCTTAGTGACTAAATTTTGACGAGGTGACTAAAATTAGGG CCGACTAATAATTAAGGCCGACTAAAATTAAGGCCGACTAAGTTCTGGCC GATAAGGTATCTATTAAATCATAACGCTTAATTTAGTAGTTTTTTATGCA GGGCGTTGCTTTCAAGGATTCGCAACACTGGTGTTAATACCAAATTTATA AATACTTATATTTTTCGGTTTTCTTTCCTACAGTCGATCAAAGATACACA TTTGTACTTCATCATCACGCTGTTGGTTAGCATTGATATTTTTGTTTTCT TGCTGTGGGTTTTCTTATCTCCATTCAACGTAGAAGAAAGCGAACTGGAG CAAATCGTAAGTACCATTAGCGTTACGACTCTAAAACCCTACTTTAAGTC TTACTGACAAGTCTTGGTGACAAAGTGAGAGTTTTAAATTTATTACAGTC CAAAAAATAAAGATTCCCTAAAGTTTTATAGTGTCTTTTCGAGTGGGAAG GAGGGTAAAATGTAATTTTAAAGACGATGAAATTTCTACCCCACCGGGTA CCTGTGGCCTAAGTATTTTAGAATGAGATGTTAAAATCTGAATATCTCTT GATTTTTCTAAATTGTAAGTATTTTATATTCCCAAATTTTTGTCCTTTTC AACGTTTCATTTACACAACACCCGCTCTATCTTCAGGTTTATCAAAATGC TGACGTCATCGATTCGTTCTTCTACCACAAATGCACGTGTGAATATCAAC TTCATTTCACGGTCACGATGTATTGCTATAAAGGCTTCTTACTCATCTTC GGATTGTTNATCAACTTCATTTCACGGTCACAATGTATTGCTATAAAGGC TTCTTACTCATATTCGGATTGTTCTTGGCATGGGAAACAAGGAATGTCAA AGTCGCTGTTCTCAATGATTCAAAATATATAGGTTTGTAGCACTTTGTTC ACCGTAGCAGTGTACATGCATGAATTCTGCACTAACATGCTCTCAAGAAA ACTAAGAAATACGAGTAGCTTAAGAAAACTGAGCTAGTAATTGCTTAAAA CGAAAAACTAATCAATTGTCTAAAGTCGATTTGTTTACATAGTTGACTGA ATAGTTTACTTAGAACTCTTTGAAATTTGACAATAAGATGACAAAAAACA TCTTTCTTTATTATCACTAGGCATGGCAGTATACAATGTGTGTGTAGTAT CGGCAGTAGGGGTCATCTGTGCTTCAGCCCTCTACAACACACAACATTAT ACAACGGGATATTTGGTGGTCACCATCAGTATCTTCCTCTGCACCACTGG AACCCTCCTTCTTATCTTTGTCCCTAAGGTAAGTCTACCAGCGAGTAAAC ATACCAATCTAACCTATAAGCCTTCAAAGAACTGTTTATTGATCCTCATC CTTAAGGGATTGATTTAGCTGGTGATAAATTTTAGTTTTAACTAATTCAA TCAAATGTCTAGGCAGATTTAAAAAATGAAACATTCTAAGTAATTGTTAA AACTTTTAAATTTTAGATTTATCTGCTCTTCGGAAAATCATTTGATGTAA CATATGGCAACGTCTCAGTGCGAGCATTTTCATCCAGTTTCGCCGGTAAG AACATGCGGAAAGGAACTGTAAGCCACCAACCCTCCACCAGTATTGCTGA GAACCCTTTGGAGTTGAGTATGTATGAAAAACAACGAGAAAGTGATTTAT ACGCACACAATCGATTCGTTAAAGCTAATAACGCTAAATTACAACATAAT AACTCGAACACTTCAAACATGGTTGGCGTCTGGGCACAACCTCGAATGAA CTCTTGTTGAGCAGGTGTCCTCGCATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065450TCONS_00065450Clytia hemisphaericatranscript
TCONS_00065449TCONS_00065449Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065449-proteinTCONS_00065449-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:566497..573824 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GABBR2gamma-aminobutyric acid type B receptor subunit 2 precursor Homo Sapiens
GABBR1gamma-aminobutyric acid type B receptor subunit 1 isoform a precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.38 1.33 3.11 3.31 0.49 0.44 1.6 2.62 8.79 10.18 4.86 9.72 6.82 6.41 7.8 7.76 0.93 2.52 0.02 0 0.08 0.08 1.29 1.44 1.37 0.77 0.32 0.14 0.43 0.8