XLOC_040917 (gene) - C. hemisphaerica

Overview
NameXLOC_040917
Unique NameXLOC_040917
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_435:132223..140662+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040917 ID=XLOC_040917|Name=XLOC_040917|organism=Clytia hemisphaerica|type=gene|length=8440bp|location=Sequence derived from alignment at scaffold_435:132223..140662+ (Clytia hemisphaerica)
TGACAGTAAAATTGTAATTTTGAGTTACTTTCTGAGGTATTTGTCGTTAT TGAGGCCAACGCTACTGGCTTAGCTTCTTCTAGAGTTGATCCCTGTGCAA GTATTGCTCCTGAGGCCTGTTTTGTGTCCATCGTATCAACAATAATGATG AAGGTATTTGCGTTTTGGTCAAAATAATAAGgcaattcatggataaaatg taCTCCCAAAATGCTTCTATAAAGGAATAAAAAGTGTTGTTGTGCCCATT TTCCCATTTGAATCGTTTACCTTTCTTTGTTTATAGCTCCCCGCAAGGGT TGAGCCAGTTAGAGTTAGGGCCTCCTTGGTCAGTTGGTCTTTTTTtggtt atgtaggttttaaaatccacaagtaatgaacctcttatagctttacctga ataaatctggttgaaaaccttctgtcaggtttcattccaactggtttccc cgatttcccgataattaaaaattggaactttcccagggcggtcatcgaaa aattgttctattagGGAGAGGTCGGGCCTTACGCTtgcggcagtaacaaa acatagtttagcttttgagaTGTATATACCACGTTCGTTGGTTGGAGCaa cgtatatttttcaggaagtcaaattatgtaacttaaaatgcgtttttttc attgaaaaaatcaaatttttttattNtttcattgaaaaaatcaaattttt ttatcgaacgtgaattttttacaaagaacaatgttttttctttccaaatg tgaaaaaagtaagaatcaagctgtttccggtggcaagcgctaagggaaag attatggtgtaattaccccagtttcagctacatctacagaaaataaaact cgcaccAAACAAACCTCCAGCgcggaatttttcataaaacactttcgctt ttggtgccgtaatgaaggtacaaaatggctggcgatgcgtgaccaaaaat tgaacttcaaaatgTAATATATTAGGAACTTtaaagaatagaccttttcg cctttgcgtccgccatattgaattgtatgcaaaaattatggttgccgaat tgccgtggtgaaattcccttagaaagtatgcaaNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNaaactaaaaacaattatattcactcatctcttagaacaagcact tcaaaagaccataacattagacagaatctcaaactgaaaaatcacccgcg aaggtaaaataacaatccttattcggctgacggcaaattattctcctggg aatagagccgccaaatgatcaagtcaaaacattgataaccaaccaaccac ggcattttcgttcctgtatttttgcatacaattcaatatggcggacgcaa aggcaaaaaggtctattggaaggtaaatgacccctcatgtttcttctgat ggttatggctttccattaatcttggtttggtattctgcaagtatgtttga aatttcctctgaccaccctagttctattcgcgtcaccggcccgcatcaaa ttttccgttgattttccggtgcggagatgcggaaaaaaatctgggaaaag caatttgttcttttaaagtatatatatagcttttttctcaattgctctga cgaccatcgaaaaattgttttgctcgcgttaccacccgcccctgagttac tggcgtgattaaaaaaaactcgggaatgtttttgaccgcccgtccgcccg cataCATTTTTAATACCCGTTGCGACACGAACAGACCATTTTTTCAATAA CCGCCTACTGTAGTGGGCGCgaatcgcgaaatattttttgtgaaaactta ccgtattctaacgctgatataatctagatagaaaacaaatattgaatttg attcttttttgttcgtatttctaaatttcacgattaaaagaactatttac aaattattttcctaacgggcgttgaatcaacattgacatatttaatgatg tcataatcaatgccgtgcatattttcagggctcgaaataacggtcggaca tcggacattgtccgacccaattgctgAAATATCCGACCCAAATCGGTTct agtcggacatcatgtccgacccaattacTTTCAGTGCCatcaaaaaattt gtcagatgcgttgtgaaatttccaaaagaaattatagtttacatagaatt agtaacttctttatttacacacaaaaactctcaaagttgcgatcattagt gttagatattcattttgtgtgatgctttttctcaacaaatgaaaGCATGC TTAATGTAAAAATCATGGGCTTCCAACCATTAATTATTGgcatttgttta gcttcttcgtgatcaatgttaaattctatcagaagcttgtattagacttg aagtataccccacataaaaatcaatcggacatgtccgacctATTTTACTT AAAGCCTTataggacatgtccgacccaaatcaatttttgatcggacaatg tgtccgaccacctaaatatcgttatttcgagccctgtattttgtcaacat tcttttcattggaaaaataccactaaaatatacaagagaaGTAAACATAT ATTTATTGCCCGagagctaagcgcacctctcttattcattatctaagaat tggaaCAAGCAAAGATTAACGCGCANCgagagcacggcttagctaagcgc acctctcttattcattatctaagaattggaaCAGGCAAAGATTAACGCGC Aggctgatagcggacaaaggttatttgaagatattttcagttataatcca aggtagaacaaactaaacatagaaagaaGGTATTTTTTAATGCTCTATAT ATACGATGAtcagtatttttttttattctatgtttagatttttctaccca gccccgttgctatgtacgcgcgccctgttgctaagatctTTGCGTGAAAT AgaaagtgaaaccaaaataatttagcgcacactgctgTTCGCGTacaata tcgataaagtgaaagaaGGTCCTGACTGGGTTGAGCAGTTGAGGCTTTCT TGGAGAAACCTTTAATGAAATCAGAATTGCTCTGCTGTGCAATTGCTGGA tcgaaaaaggattattcctctctgaccaatgagtaaagaaaatagttttg accttttctatgaatttcagctgataaacagtgaggctggaacttcgatt ttttgaggattacgattttacctgctttttagcaatttttgcctcgctaa cccaaatatcgcaacctctttaccttaaggaagatcgaaattagagtttt tcagcgttccgaaaaaaacgcatagctgaaattttttcatcttcacagga tcaattctcaacaacaaaatacatcttttggtctttgggtttgtttctga cgtttttccttcaaagaatatcgatcacttttcttttccccTTGAttgcg cgagaaaaaaatgattagcttgcGCTCtcgtgcgggcgaataaagatgag gcagcAAAcctgcactgagggtgctacttagtttccgccctattttgcgc ccacgatagaatggtccaaatacgggggtattccaaatgataaacgatgt cgttctgtaagtgtttattttctgagagatacaaatagtatattgaatat tattaacttatttatttaagtatttttcagcgcaaattcaaatatcttgt taaataaaaaataaatgatagcaattctgtttttcctcaaacccccgaga aaagtttttttgctgactcagctattttacaaatttctgaaaagaactcc cataggaattccgatacataacccaattggttaatttcggaacggcttca agaaagtcataatggcagataattttaaaagtttctgaggaaatgtgtgt ataaatctatcgatgttgatggcttgttgattatttaaagaaaaaagata acaggtatagctttttctaatcctggaatatcgaggttccagctacactg ataaagagggtgtcggaattagaagagggatgtcgacattagagtGTGGG TCGAATCCTTAAGATCCTTGGTTTATAGAAAAAGCTATatctgtttactt ttttcttgccagattcaacaagccatcaaccaacaaaattaatactgaca tcaaaaaatttacacGACCTTTCCACAagacacttctaaattatctgcca ttatgaagatgttccgaaatcaaccaatcgggtttacaaaaaagggtgtc ggaattggaggaggggtgtcgacattagaccaagttacttACTAGTTtta cccccactttttaaacaACGTCTTCTGTGGGCGTGATATCAGGCGGAGAC AAAATGCTTTCATCGTAAAATTCTCTGGTCgtcttattgtttgttccttt tgtcAAGTCTGTTGGTCCTATTGTTCATACTAAATCCATACACAATGACA TCAGTGAGTGGCGACATATATacctgaaaaacaaaaagattattattatt tttgcatgaattaTGCTACCTTATactttattatataaaaaattatacaa aacgaaaGCGAGTCTAGGCCATCTGCCTAGAGAGCGCAAgttctaatatt ttttctcttgcCGCCTTCAGGGGAAAACGAAactgatcgatattctttga aggaagaaCTTGCAAAAAAAAACCGTAGACAAAAAGATGTCTTTAGAGGT TTGGAAtggatcctgtgaagatgaaaaaattttgactaggCGTATTTTTG GCAAACCCAAAAACtcttattttttcttccctcaagctaaaaagATTTCG GGTTTTGGGCAATCAAGGCAAAAGTCAGCAAAAAGCTGATGTTTTCCGTA AATCCGAGAATCGTGATAAGATCCTCACTGCCAAATAAAAATTGCCAACT TTCCAAACTCCAAACCTCAAACCAGTGATAATCACAAAAATTCACCACCA ACCAAGTTACAAGAAGGATCTACCGCAATTAAAACTAAATCTATTCTCGA ACGCACCAGTCTTCCATCACCAAAAAGAACCATATATACATGAACAGTCT CCTAATATAATTAAAGACATTAAAGTCATTTTattacatgtttaaattcg aaaagctatgacaagggtttaaaaaagcatgaaatttcatgaaaaaagca atttagaattgacttatttatctttttaaatctgataaaaacaaagttgc actattctttgtgactttccagctttttcctgaagaattgtcatttctgc atttcactcctctttaccatgatattttctcaaattgtcgaaaactggac agcgtatttaatgcgagcgaagcgagaaaggAGATCTTAGAGagttagag tcaaactttgaagatatctttttattcatttgattgttttttaagccacc ttcaacatccaaaggactttgagtgcgttcagctacagctttaaccggcg tgcgacgccgggtaccggctagtttgtGTCCATTTGTATaacaaatttga ttggttaaaataaaagaaatgttgCAAATAATCTTCTTGAGGCAAGGGGA CACAAGGGTTTTTGTATAACTCTCAATTGcaacatgaaaattttgttgct GCAACAAAAACATCTAGCGGAAAATGTTGCAAAATAGCAATATCTGATGA ATGAAACATATCCATGCgattgaaacaaattttttttttgaacatAAACA TATATAAACAAAGGACCAATAACGATGTTTTATCAATTTCGTAAATTCAG ATTCATTAATTTAAAGTTAGATGGCTCCTCCCAAATCAAGGAAGCTGGCT GTTATGGGCTTTCGGTCTGTTGGTAAGCCTTTTCATGAATTTCGTTTACG TCCATATAAAATGAGTTTTTAGAATAATAGTCAAATTTTGTTTGTAGCTT CAATAATGGGAGTTATTATTCAAAAGTTAAGCAAGCTTTTAAACCTCTTT GTTGTGTCACCCATTGTTGATGAcataaaacaaaattatttcaaatgttt tcattcatttcttcAGGCAAATCATCTTTGTGCATTCAGTTTGTCGAGGG CCAATTTGTTGACTCATACGATCCAACCATCGAAAACAGTAAGAAAGTTT ATCAAAAAGGATACATTCATTAACAGCCCCTTCAAAAGTACTTAGTTGTA AGGATGCTAAACTATTTAATACCATTTTTTACTTTAGATCATGATATCAA gactttttttggcaaaactgcATTGTGTATAGTCTACTATATGAATCATG TCAAATTtgataactttaaaaaaaaaagatctgtTTGATAAGCTTATTTT GAGTAACATATTGTTTGTTACATAGcatttaattcaaaaatcaaacacAG AGGTCATGAATTTCATATTGAATTAGTGGATACTGCTGGACAAGTAAGTG GAATTTCATAGATATTATTATGTTCATAACCaagtttttcaattattttt aagagTTGTGTATCAAGCTAGGATTTGTCATTCTGCAAACTGTATCATCT GTTGTCAAATAATGACCAGAAAGACTAAATACATAATTATGTGTTCCATT TCTTTAGGATGAGTACTCAATCATCCCGCAATCATATGTTGTTGATAATC ATGGTTATATTCTCGTTTATTCCGTCACCTCTaagaaaaggtttttttat tgattttaattgTATGTATTATAAGTCTTTAGTCTTCACTATCCAGAGTA TTTATAATAATATTATCCCCTTCATTATTTATAGATAATCTTTCTAATAA CAACAATGCCAACataaacattttctcaaatgaatttttaaaatgaagca cagccgaaaaaaatttaaaagataaaaagcTGTGCATTTCTAGTACCTTT CATTTTGATTTGTGttttccataatttttttttcccatCAAATTttatcg ttgtttttttttcagttttgaagtTGTCAAAGATATAAGAGACAGACTAC TTGATCTAAGTGGAGTTGAAACGTAAGTTCTCAAAGTCCATACacatatt tttgttatttttcaattattaCAAAACATCACGGAGATGGCCTATGTTCA ACTGAACTGTCCCTCTTGAAATGGTGAGTTTTATTTTGATCTGTCTTAAC TGGTTTTGATACTTTTACTTCATTATTGAATTTCATGTCGCTTTCTCCTT TTAGAATTCCCATCCTGCTTGTTGGAAACAAAACAGATTTACACATGGAA AGGTTTGTCAAAAGCTAAGAAAGAATCAAGTAAACATTTGAAGTTTGACT AAGCATTTGACTTATCTTGTCTAGTGTGTATTTGAAAAATCATTATAATC AATTTTATCTCTTACGATGAGTTCATGATTTCATTGCAATTTTGATTATC ATAAATTGTTTTTAGGGTAATTTCTCCTGAAGAGGGAAGCAGTTTGGCTA AAAAATGGAAAGCAGGCTTTCTTGAATCATCTGCTAAAGAAAATAAGGTC AGTATAACTTTGCTTGATGTAAATCTAAAGGCTGTGATCAAATCGCTGCT ATTAAAACAACTTGAttcattgcaaaaaaaatttggtacATTATAAGTAG TGTAGATTATTTACTTCGAAGACCAAAACTAGATTTCTAAGTTAGGAAAC ACCCAAAGTGTTTTGCTATATTTTATTGTATACAGAATTTGGTAACACTC AGGCCTGTGAAATATTAACCTTACTTTTTTGTAGGCTGTCCTTGGTGTTT TTCATGCAATGCTTGATGTTATTTCCAAACAAGAAAATGGTGGTCAAAAA TCTGATGGATCTGGTGGTTGTTCAATTTCATAATCTTTCTATGTGTTGCT ACTGCTACTGTTGTTTGTATGTTACCCTTTTTCATCATTGTAGTTGCCTG CCTGTTGTGCAGGAATTATTGATGGTAGTTCGAGGTGATATCATTTCGAG GAAATATCATTTCGATGAAATATCCTTACTATTTTTCTCTCTGCTTTTTG TAGTGTTTGTTGTTGAATAGTTCTGTCCAATTTTTATAGAAATAAATCAC TGCACAATAGATTAGAcaaggaaaactttttttgctggATTTGGTGTAGA CTACGTAACACTTTCAGAGATTGTaaatactttatattttttattatttc attagAACTAAGTAGAGCTACATTCATTTTATTCATAATTACTTAACAAC AGGCACGTAATCATTATTTTTCTCAGATTATGTGTAAATATTTTAGCAAA ACGAAAAGTTTTCGCTCTAGGCAGGCTATCAGCTAGTTTGGGTCATGTAA ATGCCCTATATTGAAGTTGGAGTTTGGTTATATGATTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065257TCONS_00065257Clytia hemisphaericatranscript
TCONS_00065258TCONS_00065258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065258-proteinTCONS_00065258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_435supercontigscaffold_435:132223..140662 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RHEBGTP-binding protein Rheb Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.77 20 31.35 29.34 38.01 25.04 34.55 39.25 38.14 36.11 34.84 35.12 32.84 31.17 28.04 30.34 32.79 39.12 25.27 36.67 42.89 42.62 29.83 31.4 24.69 27.08 39.08 33.19 37.87 33.63