TCONS_00065258-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065258-protein
Unique NameTCONS_00065258-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065258-protein ID=TCONS_00065258-protein|Name=TCONS_00065258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MAPPKSRKLAVMGFRSVGKSSLCIQFVEGQFVDSYDPTIENTFNSKIKHR
GHEFHIELVDTAGQDEYSIIPQSYVVDNHGYILVYSVTSKKSFEVVKDIR
DRLLDLSGVETIPILLVGNKTDLHMERVISPEEGSSLAKKWKAGFLESSA
KENKAVLGVFHAMLDVISKQENGGQKSDGSGGCSIS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040917XLOC_040917Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065258TCONS_00065258Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 145..167
score: 33.99
coord: 110..123
score: 54.52
coord: 30..46
score: 33.13
coord: 47..69
score: 30.47
coord: 7..28
score: 40.17
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 9..170
e-value: 1.6E-10
score: 15.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 4..170
e-value: 4.8E-67
score: 238.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 8..170
e-value: 1.3E-21
score: 87.8
NoneNo IPR availableGENE3D3.30.70.1390coord: 5..69
e-value: 3.3E-15
score: 55.4
NoneNo IPR availableGENE3D3.40.50.300coord: 70..168
e-value: 1.7E-23
score: 82.0
NoneNo IPR availableCDDcd04137RheBcoord: 6..186
e-value: 1.50601E-98
score: 284.523
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 8..167
e-value: 2.4E-45
score: 153.9
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 6..162
e-value: 2.2E-23
score: 80.8
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 1..186
score: 23.151
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..173

Blast
[Close]
BLAST of TCONS_00065258-protein vs. Swiss-Prot (Human)
Match: RHEB (GTP-binding protein Rheb OS=Homo sapiens GN=RHEB PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.209e-81
Identity = 116/185 (62.70%), Postives = 140/185 (75.68%), Query Frame = 0 
Query:    1 MAPPKSRKLAVMGFRSVGKSSLCIQFVEGQFVDSYDPTIENTFNSKIKHRGHEFHIELVDTAGQDEYSIIPQSYVVDNHGYILVYSVTSKKSFEVVKDIRDRLLDLSGVETIPILLVGNKTDLHMERVISPEEGSSLAKKWKAGFLESSAKENKAVLGVFHAMLDVISKQENGGQKSDGSGGCSI 185
            M   KSRK+A++G+RSVGKSSL IQFVEGQFVDSYDPTIENTF   I   G E+H++LVDTAGQDEYSI PQ+Y +D +GYILVYSVTS KSFEV+K I  +LLD+ G   IPI+LVGNK DLHMERVIS EEG +LA+ W A FLESSAKEN+  + VF  +  ++  ++  G  S G   CS+
Sbjct:    1 MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRI--ILEAEKMDGAASQGKSSCSV 183
The following BLAST results are available for this feature:
BLAST of TCONS_00065258-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHEB5.209e-8162.70GTP-binding protein Rheb OS=Homo sapiens GN=RHEB P... [more]
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