XLOC_040271 (gene) - C. hemisphaerica

Overview
NameXLOC_040271
Unique NameXLOC_040271
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_41:820424..827268-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040271 ID=XLOC_040271|Name=XLOC_040271|organism=Clytia hemisphaerica|type=gene|length=6845bp|location=Sequence derived from alignment at scaffold_41:820424..827268- (Clytia hemisphaerica)
ACGAAAATCAATTTCGCTCTCTTTGTGGACTTTCTACCTAAGATCCCAAA TCGTCTCTGTTCTCCCAGGGTTTTATTCACCAGTCTTGTATCCTAATCAT TATTTTCAGATTATTGGTCTTGATCATAGTTTACATGGTCAGCGGTATAT TAATCAATAAATATGTTCGAAAAGTGGAAAAAGGTCATGAATTTCCCAAC AAAAACTTTTGGAAAGATTTTCCTGGACTCATAAAGGTAAATATGTTTGC ACCGCCCGTAACCCATTAAATTCCATTACTCCGTAACTATAAACTTTCAA ATATTTTTTGACTTCAAATGCGCGTCCACACCCCAAACTAAGAAAACATG CCAATCTGGATGTTAAATTTAGTGAGCACGTCCATATAGGAGTCTAGTTT CTTCGATTTCTTGGCCGAAAATTTCCAAATGTCAAAAGTCGGGTAGTATC CAATGATCGTTCGGCCCATCCACAATCATAGACAAAAGGTCTTTAGACTT TTCAAAAATTCCTCAATAGTGCCAGGAAAAGTCTTTTTGACGCTTGGGAA ATTCTCCAAATGGACCACAAGTGGTTATTTGGCAGAAAACACCTAGAAGC TTGCTAGCAATCCTCATAATTTTAGTACTTGTGAATTTTGGACTTCCAAT GACTGAAAATGGATGAACTTGAGCCACATAGGTCGTGGGTGCACCAGAGA GCTTTAAACAGTTGTTTATAATTGATTAAAANTTTTGGACTTCCAATGAC TGAAAATGGATGAACTTGAGCCACATAGGTCGTTGGTGCACCAGAGAGCT TTAAACAGTTGTTTATAATTGATTAAAGGTTTTGTTTTGATTGAAAGGTC TGATGATGCTGATGTAGTAAAAACAAGTGCGACAAGATTAGAAAAAGGTT TTGAAAAAATGAAAAAACAAAGGGACTTTTACTGATACTCTTTGAATGTT TTTATGTTTTATAATAAATAGAAAGTTTTCTATCTTATAATCAAAACATT TGACTGTAAATTTGCTCGAAATCAACTTTTCCATTTTTTTGGTTACAAAA GCAATAGAATGTGAGGTCACATCTCGAAACAACTTTCGATCTTTCACTTG TTTGCAGGATATCGTTGTGTAAAAAAATAGCTTTAATTTATCTGACTCGG AATGAAGACACTGCCTAAAATAAGCTAGAAAACCATCTCAAATATCTTCT AATAGATGTCTTCTCGAAAAAGTTGAAGAGCAAAACTCATTGACCTTCAA TCTTCAATCTCAGACAAAAAAAATAGCCTGAAGACTTTGCAAAAATTCAT TTCCTTCATGTCCAGTGATTTGGCTTCTGGAATTGTCACCCAAACTATCC AAATCCAATAAAAACAACATAGGCCCTGGTAAAAATGGGTTTTCAGAGCT TATTTTGAAATTTTTCATGCATTTGAAAAGTCTACAACCTTTTGTCCGAG ATTGCAGTACCATTATTTTGGTTTGTTAATCATCATTATCTACAAATATT TTCGTGAGAAGATTCGGACTTTATGTCTTTTTTGGCTGTACGGAAATCTT TTTGAGAAATCCTTGAATTACTATGGATAAATTTTAAAATATTTTTCGTT CATTTTTAATAGGATGGATTTGCTTTCACTTATCATCAAATCCGACGAAA GGATGCGTACGAATCTATATGATAAGGTTGAACTATTAGAAAAGGTACGA AAATTTTGAAATTTGATTCATAATAATTACTAGAAACGACTTTACTGCAG GCCTGTTTAACCAGCACATTTCAGGGCCAAGGCCATTCGGGTGCCAGGAG GGGAAATGGCACCTATCTTTTTTTCAAATAAAAAGGTGGGGATTTTTAAG ATTTCACAATTTATACTTCAATAGCTTTATTTCTGGACAAAATCAGACTG AAATAGGGCTATTTTAAGATCACATTCGCAATTTTCTACGGTTGCGCCTC TTCAGTCGTTATATTTCTGACTCCTCTAATTTTCATATCATGGCCTGGAC CCTGAGTTTCCTTAGATCAGGGAAATCTGTACATCCTCTACGAAATCAAA TTTTTTTGTGGTCAGAAATGTACTCTTAGGTTCNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGCGTT TATTTGGAACCTAAGAGTATAGTAAATTTACCACCACTTTTCGCTCTAGA CCCCGACTCTACAATCAGTGCCATAACATATTGGCACTTTTGGCTAATTT ACCATTTTTCGAAAATTGAAGTTCGAACGAGAATGTCAATTTTGGGCCTT TAACTTGATTGCAACGATTATTTCGATCTGGGAGGGATGTATTGGTTTCT AGGCTAGATTTCAAGCCCTACTGGACTATTTTTGAACTTTTGGATCCTGG ACTTATATTCATTACGTAATGTTTTATACGGAATCACGCAAAATAGCCCA GAGGTTTTCCACTAGTATTATTCAAATTCAAATTGACTGGCAAACACCCA GTCTTTCCTGGTTGAGTCAATCAAACCCAAAACCATTTATACCAGTCTAA AGCTCTCAAAATGCTATAGAGGACTTTTGAGTGGAGATTAACCTATTTCA AGAAAATTAACGCCAACTTTTCGTTTTAACGTCTTTTCCAGTCGATGATT TACTTAAGGAAACCCTCTTCCAAAAAACTTTTTAAATACTTCATTCTTTG AAATAATGGACCAGGTTTGACTGCGTCGCATAAAAAATGCCACGGATCCT AAAGGTTTGTCCCTTACTAAATGCATTTAATTATTGACATCATTATCTTT TGCTCCTTACAACAACAGAGTGACGAAACTGATGGAAGTGAAACCGTGTT AAATCTTGGTGTATATCTCTCCTTATTGGATCGTGTCATTCGTAAATATA AAGATCCATTACAATTTACCATCAAAGACGAAGAATATTGTTCAGTGTTA CGTTTGGTGGCCACCAAGAGATGTTTAAAGAAAGAAACGACTGAAGAATG TTATGAAAGATTACTTAAAGATAGTGAAGAATTTGAGAAAATATACCATG AAAGAAAAGGTAAAATACAGCGTGTCCCAAAATGTTTTTAGATAAAGTAA TATGCCATATATACTTTAAAGATTGAAAATATTCCAATTTCAAAAACCTA TTCAATCATCTTAGGAAATGAATATCTATTGATTCAACATCTAATTGTAA TCTTACTTCCATCGCGTTCTAACCCCAGTTACTGTGAGATGATGAGTTTT CAGCACTTTACATACTTTACAGATTTGTTCACTCTTTTTTGGGACACACT CAAACAAGGCTTTGAATATAATATACGCTCTAAAGATCTGATGATGATGA AACAAATGCTGAAAAAGAGAACATCTTTAGGGTCTTGACGTTCTTGTAAA AGTCATAAACGTATATTATATTTTTCAGTTCTTTCAGAGGTTTTGAAAAA CGAAGATTTTTGGGGCACACGACAGCAACTATTATGTGGTAAAGTCATTT CAGATTGGATTGACACAGATCATTTACCCATCGATCCTATATTCGGTGCT TTGTTATGTCCTTGTGGAGGTATTTTTCAAAACTTTTTGGATGGATCGTT CATTTACAAATCTGAACAGAGTCCAAATAACTTAAAACTTGTGCGGAATT TTTTGAAAGATTCTTAAGATATGTAACCCTTATTATATATATAAGTCCTA ATAAGGACGAAATGCATATGCTGCTTTGCCACCCAAATCACCCAAATAAT TTAATAAGGGAATTTCCCTGCTGTCCACTAATTTTCTCAGTTGGAACCAC AAGTGCTTTTGTGGTTTAGCATGGTGGCTAAATCGACCTAGCCAGCCAGG GTGCAGCATGTAGTGCTGACGAGTCCTAATAAGGAAATGCATATGCTGCT CTGTCACCCAAATCTCCTGAGTGAATATAGTTGGACAGAAATTCTTCTTT CTTCACACCATATGTATTCCCCAAATGGACCACAAGTGGTTATTTGGCAG AAAACACCTAGAAGCTTGCTAGCAATCCTCATAATTTTAGTCCTTGTGAA TTTTGGACTTCCAATGACTGAAAATGGATGAACTTGAGCCACATAGGTCG TTGGTGCACCAGAGAGCTTTAAACAGTTGTTTATAATTGATTAAAGGTTT TGTTTTGATTGAAAGGTCTGATGATGCTGATGTAGTAAAAACAAGTGCGA CAAGATTAGAAAAAGGTTTTGAAAAAATGAAAAAACAAAGGGACTTTTAC CAGCTTTTACTGATACTCTTTGAATGTTTTTATGTTTTATAATAAATAGA AAGTTTTCTATCTTATAATCAAAACATTCGACTGTAAATTTGCTCGAAAT CAACTTTGCCATTCTTTTGGTTACAAAAGCAATAGAATGTGAGGTCACAT CTCGAAACAACTTTCGATCTTTCACTTGTTTGCAAGATATCGTTGTGTAA AAAAATAGCTTTAATTTATCTGACTCAGAATGAAGACACTGCCTAAAATA AGCTAGAAAACCATCTCAAATATCTTCTAATAGATGTCTTCTCGAAAAAG TTGAAGAGCAAAACTCATTGAACCTTCAGTCTTCAATCTCAGACAAAAAA AATAGCCTGAAGACTTTGCAAAAATTCATTTCCTTCAATGTCCAGTGATT TGGCTTCTGGAATTGTCACCCAAACTCTCCAAATCCAATAAAAACAACAT AGGCCCTGGTAAAAATGGGTTTTCAGAGCTTATTTTGAAATTTTTCATGC ATTTGAAAAGTTTTCAACCTTTTGTCCGAGATTGCAGTAGCATTATTTTG GTTTGTTAATCATCATTATCTACAAATATTTTCGTGAGAAGATTCGGACT TTATGGACAATGTCTTTTTTGGCTGTACGGAAATCTTTTTGAGAAATCCT TGAATTACTATGGATAAATTTTAAAATATTTTTCGTTCATTTTTAATAGG ATGGATTTGCTTTCACTTATCATCAAATCCGACGAAAGGATGCGTACGAA TCTATATGAAAAGGTTGAACTATTAGAAAAGGTACGAAAATTTTGAAATT TGATTAATAATAATTACTAGAAACGACTTTACTGCAGGCCTGTTTAACCA GCACATTTCAGGGCCAAGGCCATTCTGGTGCCAGGAGGGGAAATGGCACC TATCTTTTTTTTCAAATAAAAAGGTGGGGATTTTTAAGATTTCACAATTT ATACTTCAATAGCTTTATTTCTGGACAAAATCAGACTGAAATAGGGCTAT TTTAAGATCACATTCGCAATTTTCTACGGTTGCGCCTCTTTAGTCGTTAT ATTTCTGACTCCTCTAATTTTCAAATCATGGCCTGGGCCCTGAGTTTCCT TAGATCAGGGAAATCTGCACATCCTCGACCAATCAATTTTTTTTGTGGTC AGAAATGTACTCTTAGGTTCCAAATAAACGCCCCCCCCCCGCTTGTTAAT TTTTCGAAAATTTTCCAATCCCCCGGATCTTATTAGGACCCCCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064251TCONS_00064251Clytia hemisphaericatranscript
TCONS_00064250TCONS_00064250Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:820424..827268 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.15 2.11 1.45 1.2 2.36 2.04 5.69 3.94 1.9 3.13 2.23 1.16 1.5 2.37 1.12 1.27 1.7 1.7 1.7 1.01 1.15 1.47 3.42 2.8 9.85 12.2 2.9 2.19 9.21 6.13