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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064251 ID=TCONS_00064251|Name=TCONS_00064251|organism=Clytia hemisphaerica|type=transcript|length=704bp
ACGAAAATCAATTTCGCTCTCTTTGTGGACTTTCTACCTAAGATCCCAAA
TCGTCTCTGTTCTCCCAGGGTTTTATTCACCAGTCTTGTATCCTAATCAT
TATTTTCAGATTATTGGTCTTGATCATAGTTTACATGGTCAGCGGTATAT
TAATCAATAAATATGTTCGAAAAGTGGAAAAAGGTCATgaatttcccaac
aaaaacTTTTGGAAAGATTTTCCTGGACTCATAAAGGATGGATTTGCTTT
CACTTATCATCAAATCCGACGAAAGGATGCGTACGAATCTATATGATAAG
GTTGAACTATTAGAAAAGgtacgaaaattttgaaatttgattcaTAATAA
TTACTAGAAACGACTTTACTGCAGGCCTGTTTAACCAGCACATTTCAGGG
CCAAGGCCATTCGGGTGCCAGGAGGGGAAATGGCACctatctttttttca
aataaaaaggtggggatttttaagatttcacaATTTATACTTCAATAGCT
TTATTTCTGGACAAAATCAGACTGAAATAGGGCTATTTTAAGATCACATT
CGCAATTTTCTACGGTTGCGCCTCTTCAGTCGTTATATTTCTGACTCCTC
TAATTTTCATATCATGGCCTGGACCCTGAGTTTCCTTAGATCAGGGAAAT
CTGTACATCCTCTacgaaatcaaatttttttgtggTCAGaaatgtactct
tagg Run BLAST on NCBI transcript from alignment at scaffold_41:825189..827268- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064251 ID=TCONS_00064251|Name=TCONS_00064251|organism=Clytia hemisphaerica|type=transcript|length=2080bp|location=Sequence derived from alignment at scaffold_41:825189..827268- (Clytia hemisphaerica)
ACGAAAATCAATTTCGCTCTCTTTGTGGACTTTCTACCTAAGATCCCAAA
TCGTCTCTGTTCTCCCAGGGTTTTATTCACCAGTCTTGTATCCTAATCAT
TATTTTCAGATTATTGGTCTTGATCATAGTTTACATGGTCAGCGGTATAT
TAATCAATAAATATGTTCGAAAAGTGGAAAAAGGTCATGAATTTCCCAAC
AAAAACTTTTGGAAAGATTTTCCTGGACTCATAAAGGTAAATATGTTTGC
ACCGCCCGTAACCCATTAAATTCCATTACTCCGTAACTATAAACTTTCAA
ATATTTTTTGACTTCAAATGCGCGTCCACACCCCAAACTAAGAAAACATG
CCAATCTGGATGTTAAATTTAGTGAGCACGTCCATATAGGAGTCTAGTTT
CTTCGATTTCTTGGCCGAAAATTTCCAAATGTCAAAAGTCGGGTAGTATC
CAATGATCGTTCGGCCCATCCACAATCATAGACAAAAGGTCTTTAGACTT
TTCAAAAATTCCTCAATAGTGCCAGGAAAAGTCTTTTTGACGCTTGGGAA
ATTCTCCAAATGGACCACAAGTGGTTATTTGGCAGAAAACACCTAGAAGC
TTGCTAGCAATCCTCATAATTTTAGTACTTGTGAATTTTGGACTTCCAAT
GACTGAAAATGGATGAACTTGAGCCACATAGGTCGTGGGTGCACCAGAGA
GCTTTAAACAGTTGTTTATAATTGATTAAAANTTTTGGACTTCCAATGAC
TGAAAATGGATGAACTTGAGCCACATAGGTCGTTGGTGCACCAGAGAGCT
TTAAACAGTTGTTTATAATTGATTAAAGGTTTTGTTTTGATTGAAAGGTC
TGATGATGCTGATGTAGTAAAAACAAGTGCGACAAGATTAGAAAAAGGTT
TTGAAAAAATGAAAAAACAAAGGGACTTTTACTGATACTCTTTGAATGTT
TTTATGTTTTATAATAAATAGAAAGTTTTCTATCTTATAATCAAAACATT
TGACTGTAAATTTGCTCGAAATCAACTTTTCCATTTTTTTGGTTACAAAA
GCAATAGAATGTGAGGTCACATCTCGAAACAACTTTCGATCTTTCACTTG
TTTGCAGGATATCGTTGTGTAAAAAAATAGCTTTAATTTATCTGACTCGG
AATGAAGACACTGCCTAAAATAAGCTAGAAAACCATCTCAAATATCTTCT
AATAGATGTCTTCTCGAAAAAGTTGAAGAGCAAAACTCATTGACCTTCAA
TCTTCAATCTCAGACAAAAAAAATAGCCTGAAGACTTTGCAAAAATTCAT
TTCCTTCATGTCCAGTGATTTGGCTTCTGGAATTGTCACCCAAACTATCC
AAATCCAATAAAAACAACATAGGCCCTGGTAAAAATGGGTTTTCAGAGCT
TATTTTGAAATTTTTCATGCATTTGAAAAGTCTACAACCTTTTGTCCGAG
ATTGCAGTACCATTATTTTGGTTTGTTAATCATCATTATCTACAAATATT
TTCGTGAGAAGATTCGGACTTTATGTCTTTTTTGGCTGTACGGAAATCTT
TTTGAGAAATCCTTGAATTACTATGGATAAATTTTAAAATATTTTTCGTT
CATTTTTAATAGGATGGATTTGCTTTCACTTATCATCAAATCCGACGAAA
GGATGCGTACGAATCTATATGATAAGGTTGAACTATTAGAAAAGGTACGA
AAATTTTGAAATTTGATTCATAATAATTACTAGAAACGACTTTACTGCAG
GCCTGTTTAACCAGCACATTTCAGGGCCAAGGCCATTCGGGTGCCAGGAG
GGGAAATGGCACCTATCTTTTTTTCAAATAAAAAGGTGGGGATTTTTAAG
ATTTCACAATTTATACTTCAATAGCTTTATTTCTGGACAAAATCAGACTG
AAATAGGGCTATTTTAAGATCACATTCGCAATTTTCTACGGTTGCGCCTC
TTCAGTCGTTATATTTCTGACTCCTCTAATTTTCATATCATGGCCTGGAC
CCTGAGTTTCCTTAGATCAGGGAAATCTGTACATCCTCTACGAAATCAAA
TTTTTTTGTGGTCAGAAATGTACTCTTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064251-exon-scaffold_41-1575043694:827033..827268 | TCONS_00064251-exon-scaffold_41-1575043694:827033..827268 | Clytia hemisphaerica | exon |
| TCONS_00064251-exon-scaffold_41-1575043694:825189..825656 | TCONS_00064251-exon-scaffold_41-1575043694:825189..825656 | Clytia hemisphaerica | exon |
| TCONS_00064251-exon-scaffold_41-1510915933:827033..827268 | TCONS_00064251-exon-scaffold_41-1510915933:827033..827268 | Clytia hemisphaerica | exon |
| TCONS_00064251-exon-scaffold_41-1510915933:825189..825656 | TCONS_00064251-exon-scaffold_41-1510915933:825189..825656 | Clytia hemisphaerica | exon |
| TCONS_00064251-exon-scaffold_41-1491911889:827033..827268 | TCONS_00064251-exon-scaffold_41-1491911889:827033..827268 | Clytia hemisphaerica | exon |
| TCONS_00064251-exon-scaffold_41-1491911889:825189..825656 | TCONS_00064251-exon-scaffold_41-1491911889:825189..825656 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_41 | supercontig | scaffold_41:825189..827268 - |
Blast
The following BLAST results are available for this feature:
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