XLOC_039316 (gene) - C. hemisphaerica

Overview
NameXLOC_039316
Unique NameXLOC_039316
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_371:96699..100093-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039316 ID=XLOC_039316|Name=XLOC_039316|organism=Clytia hemisphaerica|type=gene|length=3395bp|location=Sequence derived from alignment at scaffold_371:96699..100093- (Clytia hemisphaerica)
CGCAAAAATTTTCCAAATATTAGATACCCCCTCCCTCCATGTACTCAGAG
AACAATAGAAATGACGTCATTTAAACAATAAACGTACGCTTTTGCTAAAC
CCCCTTCTCCCCCCTTCACTGTGTACTTACTAATGGATGCCCCCTTTGCA
GCCGCTGTTTGGATTAAATTTCTTGAATATGCACAAACTCAATTTTGAAA
TTGATTTGTACAAAAAATTGTTAGGCAAAATACATGTTTTTTATAAGCAT
ATAGATATCCAAAAACAGGCTCGGAGATGTTTAGGTCGAGAGCTTTGCAA
GACTGAAATAATGCTTGAGAGGTGCTTACAAAGTGAAGTGAAGTGAATCA
GGCTCAAAATATGCTCAAATTTGCCTTTTAGAATTCTTGGCTGAGTTATA
AAAAATTTTATATTTCATTTTGAAATTTCAAAAAATGAGTCTTTACACAG
TCTTTACGTTGAATTTCTATTGTTTTCAAGCAAAAGTTGAACATTTCAAA
ATCAAATATTTTTGCTTTGGGAAATCATTGGGTCAAAAATTTGGAGGTCT
TTCTCAGGACCATATAAGGTTTCTGTAGGCCAAATATNATCAAATATTTC
TGCTTTGGGAAATCGGTCAAAAATTTGGAGGTCTTTCTCAGGACCATATA
AGGTTTCTGTAGGCCAAATATCTAAAACTATCTGATTATCCTTTTAAAAA
TTAATTTTCATGGAAACATAATTTCTTTACAGAAGTAATAACCATCTGTG
AAAAAATGTCTTTGAATTTTAATCAAGTGGTGTACATGCTGTTAAATCTA
AGAATAATACAATATCAAAAGAAAAGTTTCTAATTTTCCTATTTCAAAAT
TTCAAGATTTCAAAATTTCAACCTATTACAAAATTACAATACTCCGAAAA
TGGTTGAAATATAGTATGCCTAAATAATTGAATGTTACTTCTAGGTAAGA
AAGATAATGACCCTATAAGAAGCAAATATTGACTCATCAGACCTTTTGAG
TTCAAAAAGAAATTCTTGTCTTGGCTTTGGAAAAAGAAAACTTTCGGATG
AGGTGCTTGGTTAAGAAAATAAGAATGTGAAAATTAAATTAAAAAATACC
GTTTAAACAAATGATACGTTAGTGTAGAGAAAATACAAAGATACGTCTTA
AACTTTATAAAAGAAATTACGTTTAGTTTAAGTATAACTATACTAAAATG
TTTGTTTACAATTCATCACGTTTCCCTTCTGTGGAGTAGTCTTCACATTT
TGTGCATTCTTCATCTTGACATTTTGTGAAAGGTGGGCATTTGGGTGCAT
CTCCTCCTCTCGAACATCGAACAATCTTGGCATCCCATGCCAAATCATTC
TTCTGCACGTCTGTGGTGGTCACATACAGTTGCCACATGCAGCCTCCTTT
CCACGGGTTTCTGTTTTCATAATAATCACACGAAAATGAGGTTTTGGTCG
TCTGCTCATGCGTGCTGCTCCACGTGTAGGCAACAGATGCAGCCACGCTG
GCGGAAGCTTTCATGTCAACAAAGATGAGATTTGCTTCGATGGCCAGTTC
GACTCCCACAGAAACTTGACTTGTAACTTCGTTGGTATAGGAGACGGTGT
TGTCGATTTCGTATGTTACTGCGCCGTCTAAATTGCAGGAGATTTGGCGC
CATTGTGAAGTCGGGGAGACCCAGTCTTCCGTAACCCATTCGAACCGTTG
GTCTGGAACACCTTGGCATTGATACAAGTCGATGTCACCGGTCCCATCAT
TGCCTTCTACATCCAAGCATTTGCTGGTCTGCTTGCTCATGAATGCGAGG
TAGTTACCATCTGCATATTGCGATGGTGTTGACCACATTTGATCCGTTTG
CTCAGCACACTCATAGGTTTGTACGCTTTCAGCAGAATCACCGCTACCAT
CTGGATCCATACACGTGTTTGATGCCATGTTCACAACCTCGCCGTTCTCG
TAATGCGTCCAGTATTGCTTTCGGCTATCAGTGCATGGTGTGGTGTGTAT
GTTTGAATTCCAACCAGTGTTATCAGCTGTCGCACACTGTCCTGATTTCT
GATTTCTCAACCGTCCAGAATTGACTACTTTCCCTCGGTTGCGGAAGTAG
AAAAATTGGTCATCGCTATTCTGGCAATTATAGATAGCGATATTACCGTG
GCCCCCTGAAGCATTGACGTCGACACAAAGGTTGGATTTGACGTTCTTGT
ACTCGTAACCAGTCTGTTTTATTCCACTGGCGTCAGTGTAGGATCGACTT
CCACCAGTTTTGAATTTTTGATAATCAGGAACAGATGGGTAAAGTTCACA
AGGTTGAAATGTCAAATCTCCAGTGCCAGCTCCAGTATTGCTTGGTGTTA
AACAGTAGTTTTTTGCCATGTTTCTGATCGTGCCATCATTGCAAGCAATG
ATTTGCTGGTCTGGTCTTCCGTCACATGTCCATGTCTGGACCTCTCCGCT
GCCAGTGTCGTCAGTGTCCATGCATACTTGAGACAGCATATTGCGCAATT
CTCCAATGTGCAATGCAGACGGACAATTAGCATCGCCGTGCGCCAAATAA
ATGGCTGAAGCGAGAATCATGAAGACTGCAAACATTTTGATGTGTTTGTA
GAGAGTGGGGTTGTTAACGCCTTTTTTAGATTTTTATACAGTCCTCACGG
AGAACTGGTTTGCTACGCTTCATTAATTTTTTGGGAGTAATTCAGACATC
GTGGTCAAACGACCTGCCGCAACAGACAATCGTTATTACAGCTTAGTTAA
ACCGTCGTCTGACCAAGGATCAGACTTGATTGGTTTACAGTGTGCAAACT
TATTATTGTAATGAATACACTTTAATAATCTAATCACCCGTAATTAAGTC
TGAAATAAATTTAGCAATTAAATCATAAATCATAAATGTGCAATTAGAGA
GGCAAATTCTGTCTAGAAATATCGTACGATGGTAATCAGCGAAGAAATAG
TATTTCAAGATCAAGGTCCATTTTAATGTCCGAGTATTACAAGCATCTAT
ATTGCATTTGCTAGCGCTCCGTTATGCAAACGTCATAATTATTTCATTTT
ACATTTGACTGACAAATTTTAATCCCACAATCCTATTCGTCTTGATTTCA
AATCCATGAATGTTGTTAAAATCTTTTGTTATTGAGTGTAATTAACGTGC
AAGAGACAAAGATTCATGGGATTGAAACTCGGAAAAACAGAAATTGTGTC
TATTTTTAGATTCGTTGCGATATCCTATTTAAAAGAGCCCCCCCCCTCCC
AGCGGCACCCCTAATCACGCTATCACGCAAAAAGAAATTCTCAATCAGGC
ATCACGAAAATCGCTAAAATTTGTCATCACGCAAAAAATAGCGAAAAATA
GCCCAAATCACGCATCACGCCTCAAATTTTTGCCCTATCACGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062766TCONS_00062766Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062766-proteinTCONS_00062766-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:96699..100093 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0.3	0.33	0.45	1642.38	1519.31	2683.33	2650.48	1201.27	1472.07	963.32	615.92	122.37	160.86	564.93	489.74	118.03	136.99	113.44	45.88	0.17	0.24	0.08	0.05	4.13	3.72	0.24	0.2	0.12	0.16