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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00062766-protein ID=TCONS_00062766-protein|Name=TCONS_00062766-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
MFAVFMILASAIYLAHGDANCPSALHIGELRNMLSQVCMDTDDTGSGEVQ
TWTCDGRPDQQIIACNDGTIRNMAKNYCLTPSNTGAGTGDLTFQPCELYP
SVPDYQKFKTGGSRSYTDASGIKQTGYEYKNVKSNLCVDVNASGGHGNIA
IYNCQNSDDQFFYFRNRGKVVNSGRLRNQKSGQCATADNTGWNSNIHTTP
CTDSRKQYWTHYENGEVVNMASNTCMDPDGSGDSAESVQTYECAEQTDQM
WSTPSQYADGNYLAFMSKQTSKCLDVEGNDGTGDIDLYQCQGVPDQRFEW
VTEDWVSPTSQWRQISCNLDGAVTYEIDNTVSYTNEVTSQVSVGVELAIE
ANLIFVDMKASASVAASVAYTWSSTHEQTTKTSFSCDYYENRNPWKGGCM
WQLYVTTTDVQKNDLAWDAKIVRCSRGGDAPKCPPFTKCQDEECTKCEDY
STEGKRDEL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000772 | Ricin B, lectin domain | SMART | SM00458 | ricin_3 | coord: 167..301
e-value: 7.8E-9
score: 45.3
coord: 27..165
e-value: 1.9E-9
score: 47.4 |
| IPR000772 | Ricin B, lectin domain | PFAM | PF00652 | Ricin_B_lectin | coord: 28..98
e-value: 4.4E-8
score: 33.3
coord: 130..251
e-value: 2.2E-18
score: 66.7 |
| IPR000772 | Ricin B, lectin domain | PROSITE | PS50231 | RICIN_B_LECTIN | coord: 35..108
score: 10.953 |
| IPR000772 | Ricin B, lectin domain | PROSITE | PS50231 | RICIN_B_LECTIN | coord: 251..300
score: 9.754 |
| IPR000772 | Ricin B, lectin domain | PROSITE | PS50231 | RICIN_B_LECTIN | coord: 119..254
score: 23.295 |
| IPR000772 | Ricin B, lectin domain | SUPERFAMILY | 50370 | Ricin B-like lectins | coord: 20..166 |
| IPR000772 | Ricin B, lectin domain | SUPERFAMILY | 50370 | Ricin B-like lectins | coord: 173..300 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 181..303
e-value: 1.4E-22
score: 79.8 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 120..180
e-value: 3.6E-8
score: 33.5 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 26..119
e-value: 5.3E-11
score: 42.1 |
| None | No IPR available | CDD | cd00161 | RICIN | coord: 133..253
e-value: 4.60638E-17
score: 76.3902 |
| None | No IPR available | CDD | cd00161 | RICIN | coord: 28..164
e-value: 1.30046E-9
score: 54.4338 |
| IPR028988 | Hemolytic lectin CEL-III, C-terminal domain | GENE3D | 3.30.1750.10 | | coord: 308..448
e-value: 5.7E-24
score: 84.5 |
| IPR028988 | Hemolytic lectin CEL-III, C-terminal domain | SUPERFAMILY | 111265 | Hemolytic lectin CEL-III, C-terminal domain | coord: 303..449 |
Blast
The following BLAST results are available for this feature:
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