XLOC_039284 (gene) - C. hemisphaerica

Overview
NameXLOC_039284
Unique NameXLOC_039284
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_371:277542..285930+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039284 ID=XLOC_039284|Name=XLOC_039284|organism=Clytia hemisphaerica|type=gene|length=8389bp|location=Sequence derived from alignment at scaffold_371:277542..285930+ (Clytia hemisphaerica)
AACTTTTTTATACTAATAATATAAACTTGTTAAAGTCtggattttaaact tttattatagCCTCTGCCCTGACCCTTCTTTGCAGAGACTACTAATTTGC ATGCTAAATAATCACGAAGTCGTGCGTTGCTAATGGTGGCCGATAAACAA ATCTGcacaaaaagatcaaaaatcatcaaaatagtTGGCAGACAGTGGCA GCCCTCACACCCAACCATACGCCAGACTTTTTACTTCACCAACCAAGCAC TGGAGGGTCTTCCActtcaaagaaaaaacaacatacTTGTTTGAAACTTG ACCAAACCAAGAACAATGTCATCGTCACAGTCGAAAAAAGATGCTTTAGA AAAACTGGTAAGAGCaatatttcttattacaaaacGTTGGAATGTTGGTA TTTATGATATTAGATTTCTGTTAACTATGACTTTGAGAGCAATTTGGGAA AATAGCCAAAagtttattttgacatttttttgaaatggcAAGACCAAGAG CAGTAAAAAGTGATAGTCCAGCCAGCTTCTTGGTTCAGTTGATTGTCAAT TACGTTTCGATTGATCTACGATTATGTTAGATAAGTTTGattgcaataga ccttttttcaaagaggacgtcctgtttgaataattatgtagtccagctat aaaaacaatgatagagccatgcataattactgtatcatgcatattgtaat aattatgcatggttttatcattgtttttctgctggactacataattattc aacagggtggcctctttgaaaaaagatctATAGAcctcctttttttaaag aggcagccatgttgaatagaccttttttcaaagaggccaccctgttgaat aattatgtagtccagcagaaaaacaatgataaaaccatgcataattaata taatatgcatgatacagtaattatgcatggctctatcattgtttttatgg ctggactacatgattattcaacaggacgtcctctttgaaaaaaaggtCTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacaatgat acagccatgcataatttttaaaatatacatgatacagtaattatgcatgg ctgtatcattgtttttatgctggagtacataaatattcaacatggctgcc tctttaaaaaaaggtctattacagtAAATTGGCTCCTTTTTAAAGCTTAG CGTGGGTAGCCACCAATCAGCCAATACGCCATATTGGGGGGTCTGACCGG TGCCCACTACTACTGGTCTGGTTGGTCAGGGGTGGTATCTGAGGGTACAT GCCTGCATGGAAAAGAAGATTAGAGCAAGCGCATAAAAGTGCCGTACAAG AGTGAATATATAATTGAATCAATCAAGCATTATAGTAGAATACAATCAGA CTTTCCATCCCGTGATTTGCAAAACAGAAatgcgcgcattattttgatga tcTCTCACCATTTGGTCTCTGGAGATAAACAAACCCGTgccgaccttggc ttctgtgcaggaggccagggttcgattcccactcacggcagttcacttgg caagtgaacgttccttcgcccgggtcaacccatgccatgtgaggggaatt gggtagtcagttcaaggtgctgacaggaCGCTCagtagtaagcgtctata gttgcgagaataggcctctaaagcctcctgcaactcaaccaaatagaata gaaatagaaattccaTATGGGAAGTTggttttttaagcttttcttaagtt ctatcaatcaaaaccccctcaaattttaataaaccCCTACTATATCTACA ATCCAATTCTCAAAAGAACTTCTTCAAAAATCGTTCAAAGCTGCTGTAAA AATTGGTAAAGCGGGGGGTCCTGATAACATCACCGCTAAGGACCTATCTT TAAACCCGGNTGTGGATGAGTTTTTGACTTTGACCCAGAGCATTTATTCT CACTGAATACTTCGTTATCAGGTAGCTAGTTAAATGGATGATAGAGACAG CAAGCAGGATGATTATTTCGATGCTTTGGCATTATTCAATCCACTAGAGC GTGAATGTATTCAAAATATAGAAAGTGAGGAAAATTTGATGGAAAGACTA CAGGATCAGAAAGAAGCTGCCATTGAGCGGCTATGGTACACATTTCAAAG TGCTGCATCGTCACTTGCACAGCTACATAAAGGCAAGAAGAAAAcatatt gtttatattttttgagtgAATTTCAGCTTTCTGAAAGAATGAATGGATTT GGAACCCTCTGTGATGCCTACACTGCCCGTACTGCCCGTATTATGTTTGT ACGGGCTGTATGGGCGAGTCAACTTTATTTACAACCCGTACGTCCCATAC ATTTGTACAGGCTGAATGGGCAAGTCAACCTAATTTACATCAAACCCTgt attttcaaatataaaataaattgaCTACTATGCAGAATAGCCAAGCTTTT TAAAAATCCAAAGATATGAATTGCATAGCTTAATTACCAAAAAATAGTGC TTTGGGACACTGggattttctggaatggcccactGCGATTTTCagagtaa tgtttaaaaatcagGGAAATCCTTAATTAATGTTTGTAACACTGTAAGTG CTGTTCAGTTTCCTTAACTTTAAGGGACCCCATTTTCTGGCTCAATAAAA CCTTTATCAGTCAGTTGTTTAAGagaaaaactgcaattattgctcttttc ggaaattattgccgaaaacggcaattttttaacaatgaaatgctgaatca gcagaaaaataaaaaagtaaacaaaatgccttttttgcaaataaaaattg actttattattgaacacgtggtatttgacacccttgcgataagtaggccc actgtgcctcatttagttttgttttcaactggtctTTGTTGGCAGTgtat tgagcaacgaaaaattgaaaaatcacttttaaaaatccgaaaaacctttt tctcagtgcaattttactattttcaaacaccactgacatctttgcccttt aAAAAGGACAAcatattttgctgattcagcatttcatcgttgaaaaaatt gcctttttatGGCAATAATTGcagaaaagagcaataattgcagtttatat cttaaacacccgactgtttATGTGTACAATTTgaacgcaaaaaaaatttt caatcaaggttgcttaaaattggaaaatttgggaaatgtttgattttaga tccctcaaaatctCGCCATATCCCATGCAAGATACCTCAAAATCGGAAAC AGAATAATTCTTGATTAGGAAGGAGTAGTTAGTTTTATTGCTCTGTATCG GATAAagaaaaaatactatctttaaagatctttaatTTTTCTTCACAAGC AAAATTGGATATTATTTCAATCCAATTAAAGATCGCTGTGGGATCAGAAA ctgtcaaaaaccagctttttccaattttcatttagtCACAGGAACGAACA CGTACCTTCaaatttcccagaaaaaaatGTGTGCTCCACCGTTACGTATA TAAAAATGTGTTTGGGGGTAAACCAAACTGTAAACTATCTGTAATgcttg gtctctggaggtaaacaaataGCTGTTTTTGCCTGTGTTCCCTTAGGGGA GCTGTTTTTTAGCCAATTAATAAAACCCcctgaaattttaaaatgttctt tctatacatgatattgtaataccaccctgaaaagtttttgccaatttttg ctatcaaaagttagaagctggAAACCCCCTTTCCCTAATCTCTTGCAGGC AAAAACGCTttcgtttacctcccaaacaattttattcaGGGAAGTTTGAA TTACAGGAAAGATGTATTTGAATGGCatatcctgggtaatattcgattgt gtttgacaatcgaatcgtAATCGTTCAACTGCGTTTGATTGTGCTCAATT GATTTGGCGTTTGATTTGTTAAATTGACACTGTCTGGTCTATAGTGCATC TAGAAATCATCAACAGGACCGACAGGACCTATCCAAATTATTTACCTGAA GTTCCTGGTACATTTTTTATCCCCAGATGACGTCGTACAGGCCCAAGCTA actaaaaaattttcatgagAAAACATGACCACATCATATACCAAATGAAG GGTCTTTAAACATAGATTAAGGAAAGGTCATTAACCATAGCTGAGAGTTT CTCTATAAGAAGTTATGAAGGTTTCTTTAACGTCTGCTACCTCTCTTTTT ACCTGgtccgagaaatggcatttttaaggccaaaaatcgacgttttggac gtttttcgatgacgtcagcattttcctaggagcattttcagaaGAAATCA TTCCCATGATgactagatctcgagatattttggtttagatattgaaaatt atcaatattttttgctgagtcagcagtttttcaccATATTTACCCACCTT ACTAAAATGAATTATCTCAAGGTCTAGACACTAAAAcataacaaaccata ccatttttggaaaCTACAAActcagggctatccagccgtgggaatgattt ttctgaaaatgctcctaggaaaatgctgacgtcatcaaaaaacgtccaaa acgtcaaattttggccttaaaaatgccatttctctgcaccaggtggtcga aacttaacaaataaccccattttctttatctacttttcacactGAATCCA TTGGTAGCaacagatatttgattttcagacctcGAAAAAACTTGATAAGT TCTAGATCGATTTACTAAAAAttgattcactcgaaaacttaaggagattc gaagggcaaatttttttgtcgattctgcaccctattaggagcataatatc aaaaatttgccctgatctaaggggtgccctacaaagtgacacaattcact acctcggccgctggtctagtTGACAATTTTATAAAgtgtgtatttttttt aaaagaaggtGGAATACACCGTGTAAAGTTATTGCTCTAATAGTTTTTTC TGTAAGATTTAAATAATTTCACTTTTAGGATAAAGATTATGATCAAACCA TACCGGGAAACAGTGCCAAAACATCTGATTATTATACAGTTAAAAACATT CCAGACAGATTCAACAAACCAGGTAtagcaatttttttctttttttttcc cttaaccctttccgtgccgatgtcgtatatatccgacatgcaaattttca ctgtacttgccaatgtcggatatatccgacatcaaagttttttacctaat tgccgaggcctttaaaaaagagggagctctattgccgagaaatcagcttt taggaaaatggctttcttatttgccaatgtcgtatatatccgacataaaa aaatccaaatagtAATAGTGACAGTATATATTAAGTGCTCAAAAGATTTA TTTCAGGTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTTAGTCTatcataaaatatatataaaacaaatgtcaaatacaaatg tcaaacattggcaaataggaataaaatatccttgtcgtatatatacgaca tgcggCAACAGGAGTTAAAATttgcatgtcgtatatatacgacatcggca aatcaggttactaaaaaaaattacccctcggCAAATGGATTGAGGTACAA AAACAAGGTAACGGCACGCAAAGGGTtaagaaaacctttttttttctctt aaatattctttttcccttaaaaaaatgtttttgttaacTTTGTTAAATgt attttctgtttgaattttacatttttgctaaaataactcttgaaatattt catgagATTGCAGGTAAAAACTGTTTTCAGGTGTattattttttggcaaa aatttggcaTCTTCGAGGCTATTTTCAGCTTATTTCAATTCACGGCTCAc tgcaaaacttttcaaaacgcTGACTAAGAAAATAAATCCCAAAAGTTTGT TAAATTAATCTGATTGGAGCATTAATACATTGATTTAGACTGAAGGTATA TTATTTCTTGAGGTACAGTAGGGAATATTTTGTGTCACaaggtttttttt aaatgaaataagTGAACTACTTTCAAACTCTTTTCTTACAGAGTTACTGC CAAACATAGGGAATCCTGTCTTTACTTGTCCTATAACTGTCCAAGCTACT AATGAAAAGAGTATTGAAAATAAAGCAGACCAGGAAGGTCAGTGAATTAT TCAATACTTTTTGATAGAAGAAatccttttcattttctgaaagTCTCTAA TTGGGTAATCTGGGGTATAGGCTCTGCAAAGaatgaattgatttttttat taagaAGGTGGTTAATTTTCCGAAAGTATCATTTTGAAGCtgttataata ataataacattattcttttcattttgatctcaaatattttgaacaATTCA AAATAAACTAAGTATGAATTCAACATCATTTCACTTTATAATAAATGCCA GTCGGGTACAAAAGAATGGTGATGCTCTGTCCTAGGAATATTGGTTTTTC ATTAATCCTCTCGAAATCTGTCGAAATCTTAACAGaaaattttgtatgtt tttttcTCATCAGATTCGTTTAAAGGGTATGCCAAAAAGCAAGCACATCC AATGTATATGACTAGCGCAATGGAATACGGGTATGTGGCTTATAATTCTT AGGTTTTGTTCTTGTCTAAATCTGATATTTTACTTATATATCACAATATA TCTAAAATGTATTGTCAAAGTTAGATAAATCTCTGTATTTTTCAAACCCT GTAAAGTTTTCTTAAGATTGGCGTACCCAAGTGTTTACATCACCGTTTAT AGCATGTTTTGATAGTAAACTTTACTGTGTGTATTTGAATACGAATTTTA CCAGTGGTCTCTTTTGCAATGAAGTAAACCTTAAGGCCGTACTCCACTtt cgaaatgggcgacagtttttttcttaaccttttttacctgaagaaaaaat tacgtcataaaaaagtttcgcgcgaacaaaaaaaagttgaaggaagttct acttttttcatccgttacgtcaatttctaccaatggaattgcttcatttt tcaaccgaccaatgaccttacaaaaacgtcaaaaagttttcgctcatgtc gcgcgaaaggggagaccggcctttagtaTATTTGTACCATTTGACTCGTA AGTTTATTTCTTTATTAATCCAATTTTAGTAATCGTGAGCCAAGTGTCCA CGTCATGCCTCAGACGTTTCATGCCAAAAGTCAGAAATTCACCGAGCATC TTGGACAATGTGGAATGTATAAAAACTATTCATTGAACACTTCTCTAGAT AAGAATCCAGTCTCCTCTCAACTCGatggtttattttgaaattgtaaata ttttgttttaaatgtatttttttaggtttttaaaaatgaatAGTCAAAGA ATGAAGTAATAAAGATAATTAGATGCGTGTGGAGCTTGATTACAGAAACA CCTGTAGATATTATATCGTCGCTGTAGAATAAAAAGGAGTTATGTCCATT TTTGCTGTTTTGAGATAATCGCATTTTAAGTATTTCAATACTTGCAGTGG AAGATTGAAGCACCTTTAAAGAGGCTATAGAGGTTTTTCTGTAAATTAAG CCTATCCTTGGcaatataataattttttttcagtggatTATTGTTGCTAT CTGGCCCTTGCAGGggccaactttttttttgttttccaaaATGGACATAA GGCTCAATAAAAAGCCAAACTATTCAATTTTCTCACTACACAGTAAGGAA AATTGTGAACAAAAAAAGACCTATGTCCAAATTTCATTGTGATTATTGTC ATTGTGATTGGACATAACTCTTTCTTTTATTACATAGTCCATTCAATTAT GGACATAAAGAAAATTTATCTCAagagcaaaaaaatattataaaaaaatg aacaaaatttcttaaaatttattGCCTGGGGGAGccagaaaataataaaa acaaaaaattcaaaaattggaCATAAGTCTTTTTTATTGTACAGCGACGA tatgcaacatttcaagcatTTTGTTTAGGTTTAGGCTGAATTCTAAGAAT TGACTCGTacatttgataaattttataataATTGATTGTAAATAAAGATA AATCTCATCCTTAATGAAAATCGATCGTCTTTGCTATTCTAAAAGTCCTT CTAAAATAGACTGTGGTTACCCATGGTCAGTTAAATTTTAATTACTTATT agtacttttgatagaatttgcaTCAGCTAAATCGTATCATTCAGCCTCGT TCTCAACTTAAAAGAATGAATAAAATCGAACCATTTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062673TCONS_00062673Clytia hemisphaericatranscript
TCONS_00062674TCONS_00062674Clytia hemisphaericatranscript
TCONS_00062675TCONS_00062675Clytia hemisphaericatranscript
TCONS_00062676TCONS_00062676Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062673-proteinTCONS_00062673-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:277542..285930 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
62.73 59.17 152.61 174.99 520.36 387.02 217 228.41 109.26 139.1 108.54 107.45 9.45 8.04 9.81 11.09 13.02 17.86 14.26 15.22 21.14 21.23 26.54 22.74 154.63 107.24 114.12 121.34 15.3 16.39