TCONS_00062673 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062673
Unique NameTCONS_00062673
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062673 ID=TCONS_00062673|Name=TCONS_00062673|organism=Clytia hemisphaerica|type=transcript|length=1185bp
AACTTTTTTATACTAATAATATAAACTTGTTAAAGTCtggattttaaact
tttattatagCCTCTGCCCTGACCCTTCTTTGCAGAGACTACTAATTTGC
ATGCTAAATAATCACGAAGTCGTGCGTTGCTAATGGTGGCCGATAAACAA
ATCTGcacaaaaagatcaaaaatcatcaaaatagtTGGCAGACAGTGGCA
GCCCTCACACCCAACCATACGCCAGACTTTTTACTTCACCAACCAAGCAC
TGGAGGGTCTTCCActtcaaagaaaaaacaacatacTTGTTTGAAACTTG
ACCAAACCAAGAACAATGTCATCGTCACAGTCGAAAAAAGATGCTTTAGA
AAAACTGGATAAAGATTATGATCAAACCATACCGGGAAACAGTGCCAAAA
CATCTGATTATTATACAGTTAAAAACATTCCAGACAGATTCAACAAACCA
GAGTTACTGCCAAACATAGGGAATCCTGTCTTTACTTGTCCTATAACTGT
CCAAGCTACTAATGAAAAGAGTATTGAAAATAAAGCAGACCAGGAAGATT
CGTTTAAAGGGTATGCCAAAAAGCAAGCACATCCAATGTATATGACTAGC
GCAATGGAATACGGTAATCGTGAGCCAAGTGTCCACGTCATGCCTCAGAC
GTTTCATGCCAAAAGTCAGAAATTCACCGAGCATCTTGGACAATGTGGAA
TGTATAAAAACTATTCATTGAACACTTCTCTAGATAAGAATCCAGTCTCC
TCTCAACTCGatggtttattttgaaattgtaaatattttgttttaaatgt
atttttttaggtttttaaaaatgaatAGTCAAAGAATGAAGTAATAAAGA
TAATTAGATGCGTGTGGAGCTTGATTACAGAAACACCTGTAGATGAtatg
caacatttcaagcatTTTGTTTAGGTTTAGGCTGAATTCTAAGAATTGAC
TCGTacatttgataaattttataataATTGATTGTAAATAAAGATAAATC
TCATCCTTAATGAAAATCGATCGTCTTTGCTATTCTAAAAGTCCTTCTAA
AATAGACTGTGGTTACCCATGGTCAGTTAAATTTTAATTACTTATTagta
cttttgatagaatttgcaTCAGCTAAATCGTATCATTCAGCCTCGTTCTC
AACTTAAAAGAATGAATAAAATCGAACCATTTACC
Run BLAST on NCBI

protein sequence of TCONS_00062673-protein

>TCONS_00062673-protein ID=TCONS_00062673-protein|Name=TCONS_00062673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=152bp
MSSSQSKKDALEKLDKDYDQTIPGNSAKTSDYYTVKNIPDRFNKPELLPN
IGNPVFTCPITVQATNEKSIENKADQEDSFKGYAKKQAHPMYMTSAMEYG
NREPSVHVMPQTFHAKSQKFTEHLGQCGMYKNYSLNTSLDKNPVSSQLDG
LF
Run BLAST on NCBI

transcript from alignment at scaffold_371:277542..285930+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062673 ID=TCONS_00062673|Name=TCONS_00062673|organism=Clytia hemisphaerica|type=transcript|length=8389bp|location=Sequence derived from alignment at scaffold_371:277542..285930+ (Clytia hemisphaerica)
AACTTTTTTATACTAATAATATAAACTTGTTAAAGTCtggattttaaact tttattatagCCTCTGCCCTGACCCTTCTTTGCAGAGACTACTAATTTGC ATGCTAAATAATCACGAAGTCGTGCGTTGCTAATGGTGGCCGATAAACAA ATCTGcacaaaaagatcaaaaatcatcaaaatagtTGGCAGACAGTGGCA GCCCTCACACCCAACCATACGCCAGACTTTTTACTTCACCAACCAAGCAC TGGAGGGTCTTCCActtcaaagaaaaaacaacatacTTGTTTGAAACTTG ACCAAACCAAGAACAATGTCATCGTCACAGTCGAAAAAAGATGCTTTAGA AAAACTGGTAAGAGCaatatttcttattacaaaacGTTGGAATGTTGGTA TTTATGATATTAGATTTCTGTTAACTATGACTTTGAGAGCAATTTGGGAA AATAGCCAAAagtttattttgacatttttttgaaatggcAAGACCAAGAG CAGTAAAAAGTGATAGTCCAGCCAGCTTCTTGGTTCAGTTGATTGTCAAT TACGTTTCGATTGATCTACGATTATGTTAGATAAGTTTGattgcaataga ccttttttcaaagaggacgtcctgtttgaataattatgtagtccagctat aaaaacaatgatagagccatgcataattactgtatcatgcatattgtaat aattatgcatggttttatcattgtttttctgctggactacataattattc aacagggtggcctctttgaaaaaagatctATAGAcctcctttttttaaag aggcagccatgttgaatagaccttttttcaaagaggccaccctgttgaat aattatgtagtccagcagaaaaacaatgataaaaccatgcataattaata taatatgcatgatacagtaattatgcatggctctatcattgtttttatgg ctggactacatgattattcaacaggacgtcctctttgaaaaaaaggtCTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacaatgat acagccatgcataatttttaaaatatacatgatacagtaattatgcatgg ctgtatcattgtttttatgctggagtacataaatattcaacatggctgcc tctttaaaaaaaggtctattacagtAAATTGGCTCCTTTTTAAAGCTTAG CGTGGGTAGCCACCAATCAGCCAATACGCCATATTGGGGGGTCTGACCGG TGCCCACTACTACTGGTCTGGTTGGTCAGGGGTGGTATCTGAGGGTACAT GCCTGCATGGAAAAGAAGATTAGAGCAAGCGCATAAAAGTGCCGTACAAG AGTGAATATATAATTGAATCAATCAAGCATTATAGTAGAATACAATCAGA CTTTCCATCCCGTGATTTGCAAAACAGAAatgcgcgcattattttgatga tcTCTCACCATTTGGTCTCTGGAGATAAACAAACCCGTgccgaccttggc ttctgtgcaggaggccagggttcgattcccactcacggcagttcacttgg caagtgaacgttccttcgcccgggtcaacccatgccatgtgaggggaatt gggtagtcagttcaaggtgctgacaggaCGCTCagtagtaagcgtctata gttgcgagaataggcctctaaagcctcctgcaactcaaccaaatagaata gaaatagaaattccaTATGGGAAGTTggttttttaagcttttcttaagtt ctatcaatcaaaaccccctcaaattttaataaaccCCTACTATATCTACA ATCCAATTCTCAAAAGAACTTCTTCAAAAATCGTTCAAAGCTGCTGTAAA AATTGGTAAAGCGGGGGGTCCTGATAACATCACCGCTAAGGACCTATCTT TAAACCCGGNTGTGGATGAGTTTTTGACTTTGACCCAGAGCATTTATTCT CACTGAATACTTCGTTATCAGGTAGCTAGTTAAATGGATGATAGAGACAG CAAGCAGGATGATTATTTCGATGCTTTGGCATTATTCAATCCACTAGAGC GTGAATGTATTCAAAATATAGAAAGTGAGGAAAATTTGATGGAAAGACTA CAGGATCAGAAAGAAGCTGCCATTGAGCGGCTATGGTACACATTTCAAAG TGCTGCATCGTCACTTGCACAGCTACATAAAGGCAAGAAGAAAAcatatt gtttatattttttgagtgAATTTCAGCTTTCTGAAAGAATGAATGGATTT GGAACCCTCTGTGATGCCTACACTGCCCGTACTGCCCGTATTATGTTTGT ACGGGCTGTATGGGCGAGTCAACTTTATTTACAACCCGTACGTCCCATAC ATTTGTACAGGCTGAATGGGCAAGTCAACCTAATTTACATCAAACCCTgt attttcaaatataaaataaattgaCTACTATGCAGAATAGCCAAGCTTTT TAAAAATCCAAAGATATGAATTGCATAGCTTAATTACCAAAAAATAGTGC TTTGGGACACTGggattttctggaatggcccactGCGATTTTCagagtaa tgtttaaaaatcagGGAAATCCTTAATTAATGTTTGTAACACTGTAAGTG CTGTTCAGTTTCCTTAACTTTAAGGGACCCCATTTTCTGGCTCAATAAAA CCTTTATCAGTCAGTTGTTTAAGagaaaaactgcaattattgctcttttc ggaaattattgccgaaaacggcaattttttaacaatgaaatgctgaatca gcagaaaaataaaaaagtaaacaaaatgccttttttgcaaataaaaattg actttattattgaacacgtggtatttgacacccttgcgataagtaggccc actgtgcctcatttagttttgttttcaactggtctTTGTTGGCAGTgtat tgagcaacgaaaaattgaaaaatcacttttaaaaatccgaaaaacctttt tctcagtgcaattttactattttcaaacaccactgacatctttgcccttt aAAAAGGACAAcatattttgctgattcagcatttcatcgttgaaaaaatt gcctttttatGGCAATAATTGcagaaaagagcaataattgcagtttatat cttaaacacccgactgtttATGTGTACAATTTgaacgcaaaaaaaatttt caatcaaggttgcttaaaattggaaaatttgggaaatgtttgattttaga tccctcaaaatctCGCCATATCCCATGCAAGATACCTCAAAATCGGAAAC AGAATAATTCTTGATTAGGAAGGAGTAGTTAGTTTTATTGCTCTGTATCG GATAAagaaaaaatactatctttaaagatctttaatTTTTCTTCACAAGC AAAATTGGATATTATTTCAATCCAATTAAAGATCGCTGTGGGATCAGAAA ctgtcaaaaaccagctttttccaattttcatttagtCACAGGAACGAACA CGTACCTTCaaatttcccagaaaaaaatGTGTGCTCCACCGTTACGTATA TAAAAATGTGTTTGGGGGTAAACCAAACTGTAAACTATCTGTAATgcttg gtctctggaggtaaacaaataGCTGTTTTTGCCTGTGTTCCCTTAGGGGA GCTGTTTTTTAGCCAATTAATAAAACCCcctgaaattttaaaatgttctt tctatacatgatattgtaataccaccctgaaaagtttttgccaatttttg ctatcaaaagttagaagctggAAACCCCCTTTCCCTAATCTCTTGCAGGC AAAAACGCTttcgtttacctcccaaacaattttattcaGGGAAGTTTGAA TTACAGGAAAGATGTATTTGAATGGCatatcctgggtaatattcgattgt gtttgacaatcgaatcgtAATCGTTCAACTGCGTTTGATTGTGCTCAATT GATTTGGCGTTTGATTTGTTAAATTGACACTGTCTGGTCTATAGTGCATC TAGAAATCATCAACAGGACCGACAGGACCTATCCAAATTATTTACCTGAA GTTCCTGGTACATTTTTTATCCCCAGATGACGTCGTACAGGCCCAAGCTA actaaaaaattttcatgagAAAACATGACCACATCATATACCAAATGAAG GGTCTTTAAACATAGATTAAGGAAAGGTCATTAACCATAGCTGAGAGTTT CTCTATAAGAAGTTATGAAGGTTTCTTTAACGTCTGCTACCTCTCTTTTT ACCTGgtccgagaaatggcatttttaaggccaaaaatcgacgttttggac gtttttcgatgacgtcagcattttcctaggagcattttcagaaGAAATCA TTCCCATGATgactagatctcgagatattttggtttagatattgaaaatt atcaatattttttgctgagtcagcagtttttcaccATATTTACCCACCTT ACTAAAATGAATTATCTCAAGGTCTAGACACTAAAAcataacaaaccata ccatttttggaaaCTACAAActcagggctatccagccgtgggaatgattt ttctgaaaatgctcctaggaaaatgctgacgtcatcaaaaaacgtccaaa acgtcaaattttggccttaaaaatgccatttctctgcaccaggtggtcga aacttaacaaataaccccattttctttatctacttttcacactGAATCCA TTGGTAGCaacagatatttgattttcagacctcGAAAAAACTTGATAAGT TCTAGATCGATTTACTAAAAAttgattcactcgaaaacttaaggagattc gaagggcaaatttttttgtcgattctgcaccctattaggagcataatatc aaaaatttgccctgatctaaggggtgccctacaaagtgacacaattcact acctcggccgctggtctagtTGACAATTTTATAAAgtgtgtatttttttt aaaagaaggtGGAATACACCGTGTAAAGTTATTGCTCTAATAGTTTTTTC TGTAAGATTTAAATAATTTCACTTTTAGGATAAAGATTATGATCAAACCA TACCGGGAAACAGTGCCAAAACATCTGATTATTATACAGTTAAAAACATT CCAGACAGATTCAACAAACCAGGTAtagcaatttttttctttttttttcc cttaaccctttccgtgccgatgtcgtatatatccgacatgcaaattttca ctgtacttgccaatgtcggatatatccgacatcaaagttttttacctaat tgccgaggcctttaaaaaagagggagctctattgccgagaaatcagcttt taggaaaatggctttcttatttgccaatgtcgtatatatccgacataaaa aaatccaaatagtAATAGTGACAGTATATATTAAGTGCTCAAAAGATTTA TTTCAGGTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTTAGTCTatcataaaatatatataaaacaaatgtcaaatacaaatg tcaaacattggcaaataggaataaaatatccttgtcgtatatatacgaca tgcggCAACAGGAGTTAAAATttgcatgtcgtatatatacgacatcggca aatcaggttactaaaaaaaattacccctcggCAAATGGATTGAGGTACAA AAACAAGGTAACGGCACGCAAAGGGTtaagaaaacctttttttttctctt aaatattctttttcccttaaaaaaatgtttttgttaacTTTGTTAAATgt attttctgtttgaattttacatttttgctaaaataactcttgaaatattt catgagATTGCAGGTAAAAACTGTTTTCAGGTGTattattttttggcaaa aatttggcaTCTTCGAGGCTATTTTCAGCTTATTTCAATTCACGGCTCAc tgcaaaacttttcaaaacgcTGACTAAGAAAATAAATCCCAAAAGTTTGT TAAATTAATCTGATTGGAGCATTAATACATTGATTTAGACTGAAGGTATA TTATTTCTTGAGGTACAGTAGGGAATATTTTGTGTCACaaggtttttttt aaatgaaataagTGAACTACTTTCAAACTCTTTTCTTACAGAGTTACTGC CAAACATAGGGAATCCTGTCTTTACTTGTCCTATAACTGTCCAAGCTACT AATGAAAAGAGTATTGAAAATAAAGCAGACCAGGAAGGTCAGTGAATTAT TCAATACTTTTTGATAGAAGAAatccttttcattttctgaaagTCTCTAA TTGGGTAATCTGGGGTATAGGCTCTGCAAAGaatgaattgatttttttat taagaAGGTGGTTAATTTTCCGAAAGTATCATTTTGAAGCtgttataata ataataacattattcttttcattttgatctcaaatattttgaacaATTCA AAATAAACTAAGTATGAATTCAACATCATTTCACTTTATAATAAATGCCA GTCGGGTACAAAAGAATGGTGATGCTCTGTCCTAGGAATATTGGTTTTTC ATTAATCCTCTCGAAATCTGTCGAAATCTTAACAGaaaattttgtatgtt tttttcTCATCAGATTCGTTTAAAGGGTATGCCAAAAAGCAAGCACATCC AATGTATATGACTAGCGCAATGGAATACGGGTATGTGGCTTATAATTCTT AGGTTTTGTTCTTGTCTAAATCTGATATTTTACTTATATATCACAATATA TCTAAAATGTATTGTCAAAGTTAGATAAATCTCTGTATTTTTCAAACCCT GTAAAGTTTTCTTAAGATTGGCGTACCCAAGTGTTTACATCACCGTTTAT AGCATGTTTTGATAGTAAACTTTACTGTGTGTATTTGAATACGAATTTTA CCAGTGGTCTCTTTTGCAATGAAGTAAACCTTAAGGCCGTACTCCACTtt cgaaatgggcgacagtttttttcttaaccttttttacctgaagaaaaaat tacgtcataaaaaagtttcgcgcgaacaaaaaaaagttgaaggaagttct acttttttcatccgttacgtcaatttctaccaatggaattgcttcatttt tcaaccgaccaatgaccttacaaaaacgtcaaaaagttttcgctcatgtc gcgcgaaaggggagaccggcctttagtaTATTTGTACCATTTGACTCGTA AGTTTATTTCTTTATTAATCCAATTTTAGTAATCGTGAGCCAAGTGTCCA CGTCATGCCTCAGACGTTTCATGCCAAAAGTCAGAAATTCACCGAGCATC TTGGACAATGTGGAATGTATAAAAACTATTCATTGAACACTTCTCTAGAT AAGAATCCAGTCTCCTCTCAACTCGatggtttattttgaaattgtaaata ttttgttttaaatgtatttttttaggtttttaaaaatgaatAGTCAAAGA ATGAAGTAATAAAGATAATTAGATGCGTGTGGAGCTTGATTACAGAAACA CCTGTAGATATTATATCGTCGCTGTAGAATAAAAAGGAGTTATGTCCATT TTTGCTGTTTTGAGATAATCGCATTTTAAGTATTTCAATACTTGCAGTGG AAGATTGAAGCACCTTTAAAGAGGCTATAGAGGTTTTTCTGTAAATTAAG CCTATCCTTGGcaatataataattttttttcagtggatTATTGTTGCTAT CTGGCCCTTGCAGGggccaactttttttttgttttccaaaATGGACATAA GGCTCAATAAAAAGCCAAACTATTCAATTTTCTCACTACACAGTAAGGAA AATTGTGAACAAAAAAAGACCTATGTCCAAATTTCATTGTGATTATTGTC ATTGTGATTGGACATAACTCTTTCTTTTATTACATAGTCCATTCAATTAT GGACATAAAGAAAATTTATCTCAagagcaaaaaaatattataaaaaaatg aacaaaatttcttaaaatttattGCCTGGGGGAGccagaaaataataaaa acaaaaaattcaaaaattggaCATAAGTCTTTTTTATTGTACAGCGACGA tatgcaacatttcaagcatTTTGTTTAGGTTTAGGCTGAATTCTAAGAAT TGACTCGTacatttgataaattttataataATTGATTGTAAATAAAGATA AATCTCATCCTTAATGAAAATCGATCGTCTTTGCTATTCTAAAAGTCCTT CTAAAATAGACTGTGGTTACCCATGGTCAGTTAAATTTTAATTACTTATT agtacttttgatagaatttgcaTCAGCTAAATCGTATCATTCAGCCTCGT TCTCAACTTAAAAGAATGAATAAAATCGAACCATTTACC

Coding sequence (CDS) from alignment at scaffold_371:277542..285930+

>TCONS_00062673 ID=TCONS_00062673|Name=TCONS_00062673|organism=Clytia hemisphaerica|type=CDS|length=2295bp|location=Sequence derived from alignment at scaffold_371:277542..285930+ (Clytia hemisphaerica)
ATGTCATCGTCACAGTCGAAAAAAGATGCTTTAGAAAAACTGGATAAAGA
TTATGATCAAACCATACCGGGAAACAGTGCCAAAACATCTGATTATTATA
CAGTTAAAAACATTCCAGACAGATTCAACAAACCAGAGTTACTGCCAAAC
ATAGGGAATCCTGTCTTTACTTGTCCTATAACTGTCCAAGCTACTAATGA
AAAGAGTATTGAAAATAAAGCAGACCAGGAAGATTCGTTTAAAGGGTATG
CCAAAAAGCAAGCACATCCAATGTATATGACTAGCGCAATGGAATACGGT
AATCGTGAGCCAAGTGTCCACGTCATGCCTCAGACGTTTCATGCCAAAAG
TCAGAAATTCACCGAGCATCTTGGACAATGTGGAATGTATAAAAACTATT
CATTGAACACTTCTCTAGATAAGAATCCAGTCTCCTCTCAACTCGatggt
ttattttgaATGTCATCGTCACAGTCGAAAAAAGATGCTTTAGAAAAACT
GGATAAAGATTATGATCAAACCATACCGGGAAACAGTGCCAAAACATCTG
ATTATTATACAGTTAAAAACATTCCAGACAGATTCAACAAACCAGAGTTA
CTGCCAAACATAGGGAATCCTGTCTTTACTTGTCCTATAACTGTCCAAGC
TACTAATGAAAAGAGTATTGAAAATAAAGCAGACCAGGAAGATTCGTTTA
AAGGGTATGCCAAAAAGCAAGCACATCCAATGTATATGACTAGCGCAATG
GAATACGGTAATCGTGAGCCAAGTGTCCACGTCATGCCTCAGACGTTTCA
TGCCAAAAGTCAGAAATTCACCGAGCATCTTGGACAATGTGGAATGTATA
AAAACTATTCATTGAACACTTCTCTAGATAAGAATCCAGTCTCCTCTCAA
CTCGatggtttattttgaATGTCATCGTCACAGTCGAAAAAAGATGCTTT
AGAAAAACTGGATAAAGATTATGATCAAACCATACCGGGAAACAGTGCCA
AAACATCTGATTATTATACAGTTAAAAACATTCCAGACAGATTCAACAAA
CCAGAGTTACTGCCAAACATAGGGAATCCTGTCTTTACTTGTCCTATAAC
TGTCCAAGCTACTAATGAAAAGAGTATTGAAAATAAAGCAGACCAGGAAG
ATTCGTTTAAAGGGTATGCCAAAAAGCAAGCACATCCAATGTATATGACT
AGCGCAATGGAATACGGTAATCGTGAGCCAAGTGTCCACGTCATGCCTCA
GACGTTTCATGCCAAAAGTCAGAAATTCACCGAGCATCTTGGACAATGTG
GAATGTATAAAAACTATTCATTGAACACTTCTCTAGATAAGAATCCAGTC
TCCTCTCAACTCGatggtttattttgaATGTCATCGTCACAGTCGAAAAA
AGATGCTTTAGAAAAACTGGATAAAGATTATGATCAAACCATACCGGGAA
ACAGTGCCAAAACATCTGATTATTATACAGTTAAAAACATTCCAGACAGA
TTCAACAAACCAGAGTTACTGCCAAACATAGGGAATCCTGTCTTTACTTG
TCCTATAACTGTCCAAGCTACTAATGAAAAGAGTATTGAAAATAAAGCAG
ACCAGGAAGATTCGTTTAAAGGGTATGCCAAAAAGCAAGCACATCCAATG
TATATGACTAGCGCAATGGAATACGGTAATCGTGAGCCAAGTGTCCACGT
CATGCCTCAGACGTTTCATGCCAAAAGTCAGAAATTCACCGAGCATCTTG
GACAATGTGGAATGTATAAAAACTATTCATTGAACACTTCTCTAGATAAG
AATCCAGTCTCCTCTCAACTCGatggtttattttgaATGTCATCGTCACA
GTCGAAAAAAGATGCTTTAGAAAAACTGGATAAAGATTATGATCAAACCA
TACCGGGAAACAGTGCCAAAACATCTGATTATTATACAGTTAAAAACATT
CCAGACAGATTCAACAAACCAGAGTTACTGCCAAACATAGGGAATCCTGT
CTTTACTTGTCCTATAACTGTCCAAGCTACTAATGAAAAGAGTATTGAAA
ATAAAGCAGACCAGGAAGATTCGTTTAAAGGGTATGCCAAAAAGCAAGCA
CATCCAATGTATATGACTAGCGCAATGGAATACGGTAATCGTGAGCCAAG
TGTCCACGTCATGCCTCAGACGTTTCATGCCAAAAGTCAGAAATTCACCG
AGCATCTTGGACAATGTGGAATGTATAAAAACTATTCATTGAACACTTCT
CTAGATAAGAATCCAGTCTCCTCTCAACTCGatggtttattttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039284XLOC_039284Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062673-exon-scaffold_371-1491911889:277542..277898TCONS_00062673-exon-scaffold_371-1491911889:277542..277898Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1510915933:277542..277898TCONS_00062673-exon-scaffold_371-1510915933:277542..277898Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1575043694:277542..277898TCONS_00062673-exon-scaffold_371-1575043694:277542..277898Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1491911889:282570..282663TCONS_00062673-exon-scaffold_371-1491911889:282570..282663Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1510915933:282570..282663TCONS_00062673-exon-scaffold_371-1510915933:282570..282663Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1575043694:282570..282663TCONS_00062673-exon-scaffold_371-1575043694:282570..282663Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1491911889:283733..283828TCONS_00062673-exon-scaffold_371-1491911889:283733..283828Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1510915933:283733..283828TCONS_00062673-exon-scaffold_371-1510915933:283733..283828Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1575043694:283733..283828TCONS_00062673-exon-scaffold_371-1575043694:283733..283828Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1491911889:284205..284271TCONS_00062673-exon-scaffold_371-1491911889:284205..284271Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1510915933:284205..284271TCONS_00062673-exon-scaffold_371-1510915933:284205..284271Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1575043694:284205..284271TCONS_00062673-exon-scaffold_371-1575043694:284205..284271Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1491911889:284821..285100TCONS_00062673-exon-scaffold_371-1491911889:284821..285100Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1510915933:284821..285100TCONS_00062673-exon-scaffold_371-1510915933:284821..285100Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1575043694:284821..285100TCONS_00062673-exon-scaffold_371-1575043694:284821..285100Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1491911889:285640..285930TCONS_00062673-exon-scaffold_371-1491911889:285640..285930Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1510915933:285640..285930TCONS_00062673-exon-scaffold_371-1510915933:285640..285930Clytia hemisphaericaexon
TCONS_00062673-exon-scaffold_371-1575043694:285640..285930TCONS_00062673-exon-scaffold_371-1575043694:285640..285930Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062673-proteinTCONS_00062673-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:277542..285930 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.3398 42.5579 107.011 121.732 253.318 203.299 124.712 131.802 57.6637 73.7921 59.9944 70.4598 4.91823 3.99486 6.12562 5.83991 8.21108 11.6173 9.16554 8.93906 13.7624 12.3704 20.793 15.4861 105.791 64.5542 66.8924 61.5023 9.82441 10.4165
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR026507UPF0691
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062673 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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