XLOC_038903 (gene) - C. hemisphaerica

Overview
NameXLOC_038903
Unique NameXLOC_038903
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1688844..1694473-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038903 ID=XLOC_038903|Name=XLOC_038903|organism=Clytia hemisphaerica|type=gene|length=5630bp|location=Sequence derived from alignment at scaffold_361:1688844..1694473- (Clytia hemisphaerica)
TCAATAGTGAAATAAAAAGAAATATAAGAAAGAAAAATGGCAGAAGAACC AAAAGAAATTCCATCTTCAACATCTAATGAACAAGCAACGACAGAAACAA CAGTTCCACCACTCAAAGGGGTTGAAGTCGAGATAAATAAAAAGGTACAC GAAGAACAAAATGAAAAGGCGAACGAGGAACAAAGTGAAAAGGCAAACGA GGAAAAAAGTGAAAAGGCGAACGAGGAACAAAAAAAAGAGCAAGTGACCG AAGGTAATTATCTAATCTATGCGTATCCTTTAAATATTTCGACTACGTTT TTTTTAAAGGCCTTAAACATTGCTATGGAAGACTCAGTGAGCTATCCAAT ACTGACGACCTATACCATGTTCACATGCTGTGGTTCCGTTTAGCTCCGAA ACGAAATGAAGCCATTCATTATATTGGTTTTAAATAGAATTTCTTCGTCC CTTCTAATAAATAGAATGGCTTCTTTTCGTTTCGGAGCGGAACAGAACCG TTATGTGCGGACATGGTCTTGGCAAAATTATTAAACTCAGCTGATCTTTC TACTTATTACATCACTTGCACCAATCGCTTAGCTTCTACACACCTTCCTA CAGGAGGGGGTGTTTAAAGTTTGAATTTACTAAGGGGAGGTTGCCAGTAA GGGGGTCTTCCTACCTAAGGGGGCCTTGACCCCTCTAGAAACTATGCAAT CAGCTGTTTGGGAAATTATGTATGTCATAAGAAATTGCAGTGGTGCACAT CATAAACTGACATAAATAGTACATTTTGGAAAGTTGTAAATTAGCATTAC TTCATTTTTCTTGTCGCATTTATCATGAATTTTTAACCCAACCTCGAGCA AGCTACTTTATAACTGAACTAAATCTCACCCAAAACAAACAAAAAACAAA CAAACAAACTAAAAAATACGCAGGTCCAAACGGGAAATATTTACAGTGCT GAGCGAAACAAGGGGTCTTACTAATCACCCAGTAGATTTTCTTGCAATTT CTAAGAATTGGTGCTGATGCAGAATCGGTCTATTAACATAATCTTTAGTC TAGCAGGCTAGACAACTAATTCAGACATAGTAGAAATAAAGCAAAAAGTT ATGGAGGGAACAAATTTTAGTTTATAACAAACTAAATCCCGTAACAATAA TCGTATTATCATATAACGCTTATACTACTGTATTACACGCATTATAAACG ACTCCAGTCTACATAATCTTGCAATTTTCAATCCTGATTACAGAGGAAAA GATGGAGGTTGAAGAGAGTGGGGAACAGGAGAAGGCACAACTTCTTGAAG AGGAAGAATTGTTGATGGAGGAATCAGGAGAGACCACCGACACTTCATCT GAAAAAGCCAATGAGAGTAGAGATTACTTTGACGAGGACGAAATGTTCCA ATGTCTGGAGTGCAAAACTAAAGAATGTGCTATGTGGAGAAAATCGAAAG ATAAACAAGGTAAGCTATTTTCATGTTATTTTTCTGGGAAAGCATATTAT ATTATTGAACGAACGCACATAAATAGGTAGGGAGGTGAATCTCTTTGACG GTTAGTATCTATACTGTTCATATCGGATAAAAAAGCAGAATCTCTGACTG TTAGTATCACGGTCTCCTCCATTGAATTTGAAGCCCTGAAATGGCTAGAG AGTGATCTTCATACTTTCTCGAGCAAGAGAAATGGATGGTAAATAAGTGG CTTTATTTCCCATCCAGGAGCTTTGGATCAATGGTCTCATTACAATTTTT TCTTAATGGCTGAAGGTTTCAATACTGATTCGAGTGATATTGAAAGCTGT TATGTGTCGAGAGGTATCAGTTGATTTGCTTACATTTACCTGTAAGATAA AGCTTGTCCATCCCCATCATCTTTTCCAGGTGTGATTTGTAATCTTTGTC ACTTGGAGCGTATCAAGGGCGACTCGGCCACTAACGCCCCTGGCCAGGGT GGAACAAATAGCAATAACAATGCAGCATCTTCTTCAACCAGCAAAACGTC ATCTTCTCTAATGCAACCACCCATGAAAGCCAAAGATGTTCGAATCTCCA AAAGAAAAAATAAACAAAATAAGGTGTTTGACTTGTTCTTTCTTAGCTCT TACCTCCTGTGTAATGATTAAAATTCATTTTGCAATTTCCCTTACAGATT TACCTTTTGTTTTATTTCATCCGACTGCTTTGAATTGATAGGTATGAAAA ATCAAGGTCTAGTCATTCAATTTTTGGAAGTGAGAATAGACATTTTCATA AATTACGTCACGAGCAACGCTTACCTCGTTTTCAAGATATTGCTATGGTT ATAGATTCCCAGAGGAGTTCATAAGAAGTTTACTCTATTTATAAAAGTAC TACTTGAAGAAGAAGGGATTTAATTACCTTGGTAATGGTTTCAAAACGAG ACAGTCGTTGCTCTCAAAATAATTTATGAAAAGGCCTATTACACTGATTT CTTTCCCTTAGAAATTTACAAACGGTTTTTACGGCGATCGTATTATAAAG AGTGGCCACTCTAAAAGTCGTCGTTCATTGTACAAAAGAAAGCCCATGAA ATCCGTGCTCGGTTCGTCCACTATCGTGGCTTCACAGTCTATTTATCATG ACGTAAGTGTTGCAGATTGCTTTTGTTTTTACGGAAGTGCGTATAATCAT TATCATGTCTAAGACACGTTGATACATATTTTCTGATGAAGTAACTGCAT TGAATAGAGTCCATATTTAAAATGTGGATAGCCCAGTAATCTAGGACTTT TAGGCAGTCTTTCGATTGCTTTCACGGGGTCCACGGCCAGCCGGCTCGGC TATATTTGAACTGAACGGAACGTTGAAAGAAGCGGGGATTCTAACCTGAT AAGAACCTGAATTGAATCTGATTTTATAATCTGATCTTTTTCAGGGTCTG TTATACCGAGTAGGGGATATTGTTTGCACGTCANCAACCTGATACGAACC TGAATTGAATCTGATTTTATAATCTGATCTTTTTCAGGGTCTGTTATACC GAGTAGGGGATATTGTTTGCACGTCAGACATCGAAGGGGGGACTTACTAT GCACAATTAAGAGGTTTCTTACAAGACGAATACTGCGAAAAATCTGCAGT CATCACTTGGTTAATTCCCACCAAACGAAATGTCACCAAATTCGACCCGA TGCTTTTCGTGCCAGGTATGTAAATTCTTTATCTCTCCACTACAGTCTAA ACGTTTAGTTTTTCAATACGTTTTTTAAGCAAACTGGTTTCCTTTCCTTG GTCTTTGTTCGTTTTCACGACAAATTGTGGTTATTTTAGTCTTCCCTGTT TTAAACTTCTAAATCACTTGAAGTTGGGATTTTCTTAGACAGGCTGAGCT TTTCTTAGTTTGTTGTTTTATTTTAATGATTTTTAACCTCGTTTCTCCCA TAAAATTCAGGAAGAGGTCGGGACCTGTTGTGCTCTTCTAACAACTAATT TTTAAAGGTTTGATTGCGCCCAATAAGTTGAATCATTTATTTGACCTACA AAAGTTGAGTTGATATTTCAATGAATAAATTCCTTACTTTCTTTAAAATA GAAATGACATTGATTCGACATTTTGGATGTGAAACCCTCTCACGGTTCTT TCATAAAAAGTGACACTTTTCTCTTGGAACATTTCAAAGTTTTCTTTCGA AAGATCTTAACGGACATATTGACATTAAAGAGTCCCAAGAAAGATACTTT CAAACTTCTCTTTTTAAAGGATTATGTTCGATATTTCTAAATTTTCAAGT AAATGAAATCAAAAGATTTTCTCGGACATGATGACTATTTTTAGCCCCTT GCTTCTGTAATTTTCATGATGTAGAATTTGTTCAAAATGCTTTGCCTACT TGGCAATCATTTTAAGTTCCTTCTTTCGTTGGACAAAGTATTATTTATTT CAGAGACGTGATGTAAAACTTACGAAAGTACGACCTCTCAAACCATCATA ATCTTAAAGTTTGAAAAGAAATTGTCGCACCCACTATAATCGAATTAGCC GATCTTTTTCGAGAGGGCATGAATAAAATCTTTCAAGTCACACATATAGG AAGAGAGACAAAAAATAAGTTCAAAGGTGACATTAAATGATTAACTCTTT TTGATGTTTCAAAATCTCATCTTTTCTTCGTAACAAAACTAGATTGTTTA TCATGCGATACTTTCACCGCCTTTTATCTTTTCGTGACCTTGCTTCATCA CACCCTTTTTAAAGGAGGTTTCCCCAAACTTCTTTGAAAAACACCAAGTT TCACCTGTACAAAAGAATTTCTTCCTCCATCTGATGTTTATGACGTGTCG ACAACCGAGCGTCTGTTTTTTAGATTTCTAGAATATTGTGCTTCAATACC TCATCGGCCCTCGATACTGCATCTCCAGTGTCGAGTGCAATCATTTTGCA AGCAAACTTCGTAGAATTACTAGCTTCAGCTCAGAGGAATTTCTATTTAC TTCAAATTATATTGCTGGCCTTTGCTTGTGCCCCCCTTCTCAATGAGTCT CAAAAACCTTTAAAGTTATTCTTTTCTATGATATGGAAAGGAGGCGCGCT CATTATGCTGACAAAGCATAAGTAACAAAAGAATTTCTCAAAATTTAAAA ATGCTATGTAAGAGATACATCAAACAATGTTCTTTAAAGGTAAAATGCAT TTTATTTGATCGGTCCTTCTTTTCTCTCTTAATTTTAGGGTTAGACGAAG AGACACCACGCCCAATGTCGTGTTTTAGTTTCGTTTGTCGCGCATCCACC AACCTTTTTAAAGCTCCGAACATGCATCCACCTTATCACCGCTCACAATG TGACCTCAACGACCTCATACATGTCGCCAACGCCATGAATACTGAATCAA CTGAAGATCACCAGCTGACAACAGAAGGGGAAAGCTGAAAGAAGACACCA TTTACTTGGAGAACTTGGATTTTGATATACGTCGATGTTCATTTGGTGAA CAAGATTGGAAAATCACTAACGAGACCAATGGAGATAAAAACGGATTTTG ATGTATTTCAATGTTCATTTTTAGCTTTTGGTGAACAAGATTGGTGTGTA TTCTATTGGAGAGTCAAAAATGAGTCAAATGGAATTAATGATCAACCCAG TGTGGATTCACCTATACTCGCTGGTATTTAGTATTGGATACCGTGGTCTT TAGATTGCCAATATTTCACAGCGCTTACGTGTGTTGTGATTGAATGTTGT TACACAAAGTAAACTGAATTCCTGAAAATTTGGCGTTTTCGTTCAAAGGG AGATCTTGGTAATATTAGCTCTAGTTTAGACGGCACAATTTCCATCCTCC CTATTCTAATTGTAAATTAAAGCGGGCAAAAAGTTGTCTGTCTTAAGTCA ATGCATTGCCCTCTTCTGACGTCAATACAATGTCTTCTTTCAATCTTTTC CAAGCAAAGATTTTTAGCTGCCAACTTTGCGCCCACTTTTCGTCTACTCT AACAATTAGAATAGGCAGAGCAGAAAGTCGACCGTCTAAACTACCTTAAA GGAAGAAATTTTGGCGGGAATTTAATTTGGCGGATGGCTGAAAAAGTTTT TTCAGAGGGAATTTAATTTGGCGGATAGCTGGATAAAGTAAATTTGACGG GAATTTAATTTGGCGGTTGCAGGATATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062079TCONS_00062079Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062079-proteinTCONS_00062079-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1688844..1694473 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.92 31.27 9.28 5.72 19.93 15.73 15.02 14.84 8.84 11.67 10.91 8.19 8.59 7.91 10.19 11.16 13.57 14.01 6.29 6.03 9.82 9.39 33.63 29.47 14.17 16.63 7.92 6.48 20.16 21.95