XLOC_038336 (gene) - C. hemisphaerica

Overview
NameXLOC_038336
Unique NameXLOC_038336
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:800251..808537+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038336 ID=XLOC_038336|Name=XLOC_038336|organism=Clytia hemisphaerica|type=gene|length=8287bp|location=Sequence derived from alignment at scaffold_354:800251..808537+ (Clytia hemisphaerica)
caaaatttgattaaattagGGATAATTTGTTCgaaatttttatttctgat ttcAGCAAATCTTACAATCAAAACATACAAAAGAAGAGTGTCTAGATCAA AACATGAGTTTGAAAGCTGCTGGTAAATCGTACCGAACAAGAGTAGGTTA TTATTTTGGCGCGATTTGTTTTAGAAAGCAGCATTAAACATTGCAAGGTT TCAAAATTCCGGGGGAGTAAAGCGCTTTGTATAGCGGCTTTCCAGGTTTC ATTCTGAACTTTGGAGCGAAATCGGAAAATGAAACTAAATAATGGaccgg aaaaatattttttattttgtcgtTTCACTGGAAAGATTTCACCTGCTCTT ATCTTGTCACTCAATGAGAAAAATCCaatgtttgtaaaaattttctttac ccCCGTCTATACAATCGAATTCATAAAGTAGAAGATTCCATGGAACACAG AAAAATTCGATTGTATATCCGGGGGTCAAGACTCTTTTCTCTTCACGAAA AATTTCAAGGTTATTGTTTGAAAACTATCAATCTGTTTATTTCTATCAAA TATATTAAAATGATCTTTTGTTATCATTGAGTATAtgtaaaattaagaaa aacagCTGCGTGGAATATTTTTCcacatttatatattttataaagtttta ctACATAACCCCCTGATAGGTTTTGAACTTGTTTTCCTTTGCATCTTCAG TTAATTTTATTGTTCGTCTCGCTCGTTCGTCGAGAGTggaagagaagaag aaacaagttgaaattttcataCGTGGCGTGGCGTGTTGTGTGTAAAAACT ACCTTTGGACattaaaaacgaaaataaatttggaaaaagaagacaaaaat tGATAAGAGTGGAGGGTTAAATTTATATACTTGAAAATGGGTGATTACGG GCCTACGACGACGACCACAAATACTTCAAGTTTCGAACCGTTTAACGCAG ATATTTTCAAGGAAGCAAAATTGCAAAAGGAATTGAACGACAGTAAAGAC TCTGATGAAGGGTTTAGCTCATCATTTTCACCTACTAGTGAATCTTCCAT GATTCAAGGAGAGGCAATTTCTACAAGTTTACATCTGTGGGGTAACAACT CTGCTGACAAAGACGACCAATATTTTATCAATTCATTGGCTCCGGTGAGT TCAAATTCCTCCTTCCTTCCTCAAAGTTCAAGACGTACAGCACAAGCACC ATCTCCTATTCAAAATGTCAAGAAGCCCTCTCCTGCTTTATCAAATTATT TGGCCACAAATAAGGCTGCAGCTCATTCGTTGGGAGTCTCATCAAATGGA AATGATTGGAATCAACAACAACCCCCAACTCAAACTTCAAGTTGGCCCAT GAACCCNAAAACTAAATAATGGaccggaaaaatattttttattttgtcgt TTCACTGGAAAGATTTCACCTGCTCTTATCTTGTCACTCAATGAGAAAAA TCTaatgtttgtaaaaattttctttacccCCGTCTATACAATCGAATTCA TAAAGTAGAAGATTCCATGGAACACAGAAAAATTCGATTGTATATCCGGG GGTCAAGACTCTTTTCTCTTCACGAAAAATTTCAAGGTTATTGTTTGAAA ACTATCAATCTGTTTATTTCTATCAAATATATTAAAATGATCTTTTGTTA TCATTGAGTATAtgtaaaattaagaaaaacagCTGCGTGGAATATTTTTC cacatttatatattttataaagttttactACATAACCCCCTGATAGGTTT TGAACTTGTTTTCCTTTGCATCTTCAGTTAATTTTATTGTTCGTCTCGCT CGTTCGTCGAGAGTggaagagaagaagaaacaagttgaaattttcataCG TGGCGTGGCGTGTTGTGTGTAAAAACTACCTTTGGACattaaaaacgaaa ataaatttggaaaaagaagacaaaaattGATAAGAGTGGAGGGTTAAATT TATATACTTGAAAATGGGTGATTACGGGCCTACGACGACGACCACAAATA CTTCAAGTTTCGAACCGTTTAACGCAGATATTTTCAAGGAAGCAAAATTG CAAAAGGAATTGAACGACAGTAAAGACTCTGATGAAGGGTTTAGCTCATC ATTTTCACCTACTAGTGAATCTTCCATGATTCAAGGAGAGGCAATTTCTA CAAGTTTACACCTGTGGGGTAACAACTCTGCTGACAAAGACGACCAATAT TTTATCAATTCATTGGCTCCGGTGAGTTCAAATTCCTCCTTTCTTCCTCA AAGTTCAAGACGTACAGCACAAGCACCATCTCCTATTCAAAATGTCAAGA AGCCCTCTCCTGCTTTATCAAATTATTTGGCCACAAATAAAGCTGCAGCT CATTCGTTGGGAGTCTCATCAAATGGAAATGATTGGAATCAACAACAACC CCCAACTCAAACTTCAAGTTGGCCCATGAACCCACCACCACCAAATCCCA TTGGAACAAATGCTAATTGGAATTTGCCCCACATGAAGAATGGTATGAGT ACCCATACTCAATCTGCTCCTGCTTTGCAACACATGAATAATGCTCAACA GATTGCTTATCAACTTCAACAACAAAAGAATATGCTGACCAAAACAAATG GAATCATGACAAACGGACACTCGTCTGGAAATCACCCTTTCCCTCCAAAT ATCGTACACTCGAAGAATATGAAGAATAGTATTCGTGGTTTTCCTGCCTC CCAAGTTCCCCTTACTTCAACAGGAAGGgcccatcatcatcatcataatc aTCATCATCTACCTCATCATGGAAACACAGGAATAGATTCAACAATTGTT GAAGATATTGGGCATTTGACAAACAGTTTTTCAAATCTGTCTACAAGCAG TGAACACTCGCATTCAAATTCTCATCCTGCTAATGGCTTTTCATCAAACC ATcaggtaaatattttttttcgcttctttttttctcaaatgtcTTGATAT AGTTTTGTGTAAAGAGTGGTtcataatatttttcatttttatttttggta tcTTAGCgacatttttgaaaacaaaagaagtgCGTCGACCAGAGAGAGGT TTTGTTACTacgaaaagttttttatttagaatcagcttttttgacaaata atattttcatttctagtTATGACATCCATGCATACTTTTATGataaacag tagaattttcTCTCTGAATATTTAGATATCTTTTGTTTGCTGAGAGTTCT CGTAATAAAAAATTTAGCTAGCTTTCTCTTGAAGGGGGCAggtgttatga aaaaaaaagtttttttttattgcatGATGTGTTAAGATATAAAAAGGTTT TTCATACTGAAACATGTTGGATTGTGTGAAAAGAACGCATGTCCATATAT TTTCTGTTTCTCACCCGGCTACTTTTCTCTTTTTCCTCTCAAAAAATTTA TGCAATCTTTTTCATTGCACCgcgaaaaaataacaaaagaaaactcTCAG AAACCGCTTTCCAAGTAGACAAAACGTTTGACTTACTGctcaaaaattat aagaaaaattacaaGATTAAAATGAATTACGAAAAAGTATGAAAGAAAAT ATAGTAATTGGAAAGAATTATTTTATTGTTGTGTCAGTAACGATTGATTG GGTGACCTAATTGACCTTTTTGTCACTTTAAATTCAAAGTGTGTTGTTAA TTGATCAATGTTTATTGTGAACATGTGTTTCTTGTCAGACGCACATGGAT GAACTGTATTTGCTTTTAGCGTAGTACACCGGTGCTTCTACGTCAGGCAC GTGTTTTAATTTATAGAAAAATGGACAGAAAAAATAAGCTTTTTTCTATT CGAGTCTCATTTCTATCTGTGAGCTTCAGTGAGTAAACAAGTTTGTCTTG AATACAGTTGAATAATGAAGCTGTATTTCCAATTTCAGGATAGACGCGGC GAGGATGGTATGAAATACTCATCCCTCGAAAGTCGCTTCCTTGGTGATGT ATTCAAGTCACCAATCGATTCAGATAATCTCAATAACTATGACGGTAAGT TGGTTTTCAATCTagccattttttaaaaagattttaacaatattgcattc tgttttttcttctatttgACCTCCCCTACTTTTTTTGTCCATCATTTGCT TTGAATTATGTATAACTTTAACGAGGCTATTCAGCGCATTCAAAAACGTG TTTTGGCTTGAATAATGCGCCGTTTCGACATTAATTAGTTTTTgccgttt tgattttttcataatGCTGTCCCTAGTTGCTAGGAGACAAGTGCACCGAT TAAATATTACAAGTGATTTTTTCTTGCAGCTTTTCGAGCATACAACAATC AAAAGAGTAAAGGCTTCCCCAGAGCTAGAGAaggtttgtttattttatta gtatgttaacTGTAAATGCTTTAAAGGGGTTATTGTGTAATATTGATTAG GCTTTTACTTTGCCCCCTTTCTTACCCTTGATCAAAAGATAGATCGTCTT TCGAGTGACTCACTTTCTTCAATTGCTATTACtatattttcccatttttt aaTTCTTCAGATCAAATTGTTCCTTCTATTGGCTCGTCATTAAATGGTTC TCCGAGATCTGACTTGGATTTTGGAATTGAAAGATTCTCAAGAAAGGTTT TTGTTGGTGGACTCCCCCCAGACATCGATGAAGGTAAGTAGGAAACTtct cttatttatttatttattgtgAAACCATTGTTCAATGACAACATCGAGCT TGATTATGACTCATTGGCATTTAGAACTTGTCCCCATGAGATAGGAACAT CTGcagtattttcattgtttgaagggagaagaaaacaaaaagaagtcATT AAATATGCATCCCCCTgtacattttgatcaaaatttttcttttcattttc gcTTCCCCATcttcttattttttattatattaaatAGATTATATctggtt tacaaaaatatggCACCCTGAAAGGCTTTTCTCCTTTATCATAGACACAT TTATTATTCCTTATTTTGGGAAAACATGAGTAATTTCTAAATTTATTCAC AATTTCTCTGCTCTTATTTTTTAGATGAAATTCATGCAAGTTTTTGTAGA TTTGGCCCCCTTACTGTTGACTGGCCCCACAAAGCAGAAAGCAAATCATA TTTTCCTCCGAAAGGTAGATTTCTAATAATTTGACATTCCTCTCATTAAT TTTGTATTGTCCTAATGCTCAATGTCACATAACATAGCGATNcccccccc cccccaattatATTATGTCCCCAAAAATTATTGTACTTCCAGCCCACTCC TATTTATGGAAAGGAGGGTGTAACCCCCTCTTTCCGGGGGGGCTGATGAT CAGGATAAAGTGTTGGTTCTGGTTGGTTCGCTCCTGGGTTGATCTATCTC AAAGCAATGGCTCCACCCTTCAATACTAAACAGAAGGCTATTGTGTATCC CCTTTATCActttgttacatactttttaaactcttaaattcttttttagg gTATGCATTCCTCTTGTACAAAGATGAAATATCTGTGCAAAGACTCATTG ATTGTTGCATCATGCAAGATGGGAAACTCTATCTCTGTGTGTCTAGCCCA ACAATCAAAGACAAACCAGTCCAAATTCGACCATGGAATCTGGCTGATGC TGACTTTGTCATGGATGGCTCACAACCCTTGGATCcaagaaaaaccattt ttgttGGTGGTGTCCCAAGACCTCTTCGTGCTGTTGAATTAGCCATGATC ATGGACCGACTTTATGGCGGAGTCTGCTATGCTGGTATTGATGTTGACCC AGAACTGAAATACCCAAAAGGTGCTGGAAGAGTTGCCTTTTCAAACCAAC AAAGCTACATTGCCGCAATCAGTGCAAGATTCATTCAGCTGCAACATGGA GAAATTGATAAGAGGGTAAGTGTCAACTTATAGCAAATCCAAGCTCGCTA TAGTTGCTTTAGCTCACCTGAATGACAATGTTTGACAATTCTTGAATAAT TATCGAATTAACTTCACCTTACTTTTAATGGCCCTGCAAATAACTACTGT GTTTTTAGTTACTTTAATCTTGTTGAATCTTTCCATTGTCCAGGTTGAAG TTAAACCATATGTCCTAGATGATCAAATGTGCGATGAATGTCATGGTGTC AGATGTAATGGAAAATTTGCTCCATTCTTCTGttcaaacatcacttgcct tcAATATTATTGTGAGCAGTGTTGGGCAATCATTCATGCAAGACCTGGAC GTGAATTTCACAAGCCACTTGTCAAGGAAGGCGGTGATCGTCCAAGACAA ACAAGTCTTGGCTTGAGATGGTAAGCTACTACTTACATTTCCACTAACAG TGGTTGCCTTGGCAGATTGTCAAccaaattaaaattaattttgttaatCA AAAATTTCCACAAAAAATATTAAGGTCATATCAGATTGTGCATCGTGGGA ATAGAATTTTGCATTGTACTTCATTAAGTGGATTTGTGGaattatatttc ttttgttttaaatctcTCCTTTTTTTTCTGTTCAGGCCCTTGAAAACCAC ACCCCTTGGTGGAATTCCTTCCATTCCATTACTTCAGTGATTGCCATACA AAATGGAATTGGAATCATCAATGGGatcaaaatcagaaagaaaaatttgt aaataatacTTTTCTTATTACTTTCTAAAAATTAGCATTGCTAGTTAATG cctattttttattaaaatgaaaACGACAGTTTAATGCAGCAGAGGTCAAA TCAAGCTCTTTTCCAagtcaatgataaaattttaccTTCTTTGAAGCATA GTATTTGCTCTCAGCTGTATTACTGTCCAGATtacattttttattacttt ctttcTTACATTCCACTTCAGCtgcatttcttttttatttgacatggaaa aagttttttctaaaCATAGATATTTTAAACGTCTGAAATGCTAAGTTTTC TTCTGTCATGCAAGTTTATTAAAATTCTTTAATTTGATAATTTCTTATTT CTGGCTGTGCCAGGCTTCAAAGGCTTTTTTTGATGTGCACTTAAAAAAAT GCTTAACACTTTTTAGTCATCGCCTTatttcttgcaatttttttaacaac tGATATCTTATAGAAAAGTTGGCATTTTTATGTTTAATACTTAGTTTTTT GTATTTGTTGGGTTTCGATACTAATTATTAGTTCATTAGCCCAGCTGAAT TCACGATTTTTTCCaatagtttgttttttaagaaagagtttatttttatt ttcaagtgacattttttcaaagcaaaatttagaATTAGTTTCTACTGATT AATTGTTTAAATGTTAGTAGGTATAGTCTTTTGAAGCATCTGCTCTATTT TTAAGTGGAGTGAACGTGTGGTGTTGCTTTTTACATTAAAAAAGTATGTA CGATGTTTTTGTGAACAACTGCTGACACACTCAACATTGGCAATCCACCA TATCATATTCATATTTTTATGTCCATTTCTGTGGAGAAGTTTCTTGTACG AGCTTTCCTATGTTCATGTTGTTTACTGAAAGTTATTTATTGTTACTACT ACCTTCCagaataattttttaaagtaaattttttaagAGAATTCTTTTTT GATTCACCGTTACATATATTCTATTTATTCTTTTGTGCTGTGTTTTTTTT ACTGAATGCTTGATTTGTATACCTCTTCCTGAAAGGTTGAATTATATTCA AGTCTACCTAAAGAATGGTTCAAACTACTTTTGGCGTGCAGTTTTCTGTC AGagaattatttattttcttatagaattttttaaggttttcacACTTGTA GCTTACAGCGATCAGCagaatttcattttgttttagtAGTGAGATAACTT GACATTTTTGGGGGCAAAGCAGCATTGATTTCCTTTTTTATATTAAATTT ATGTATATATTATATAGGTCCATGTTCCCAAATAACTTTCTTTAGCTATT ATTCAAGATTTAAGTTGAAGTTATTAAAAAATCCTTTATACATTTTAAAT ACGGTTATCTatgtttttaataagaaattAATAATAGTTTTTGGACTAGT TTTTACGTTTATCTGCTAtactatttttgttattttacattttttcttag ttgaaaatattttgtcactattattttaaaagattttttgccctttttat cataaagttcaaattttttgagagaaaaaaacataaaaataccaaaaaaa tatcTCGGTTATTATTACAAACTTTTACGTATTATTATATAAAGTATATA TAttgtattttatcatttttaaaactataatgatttttttgaaagggtat aaattatcatttttttcagaaaaaagttacttttgaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061099TCONS_00061099Clytia hemisphaericatranscript
TCONS_00061100TCONS_00061100Clytia hemisphaericatranscript
TCONS_00061101TCONS_00061101Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061101-proteinTCONS_00061101-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:800251..808537 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.13 1.01 0.41 0.15 104.79 90.62 108.52 116.27 29.66 37.38 34.42 28.14 26.82 23.71 20.94 44.85 31.96 31.64 12.78 17.02 26.38 23.82 12.3 17.31 213.89 186.35 12.2 8.85 6.72 7.54