TCONS_00061099 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061099
Unique NameTCONS_00061099
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3381

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061099 ID=TCONS_00061099|Name=TCONS_00061099|organism=Clytia hemisphaerica|type=transcript|length=3381bp
caaaatttgattaaattagGGATAATTTGTTCgaaatttttatttctgat
ttcAGCAAATCTTACAATCAAAACATACAAAAGAAGAGTGTCTAGATCAA
AACATGAGTTTGAAAGCTGCTGGTAAATCGTACCGAACAAGATTAATTTT
ATTGTTCGTCTCGCTCGTTCGTCGAGAGTggaagagaagaagaaacaagt
tgaaattttcataCGTGGCGTGGCGTGTTGTGTGTAAAAACTACCTTTGG
ACattaaaaacgaaaataaatttggaaaaagaagacaaaaattGATAAGA
GTGGAGGGTTAAATTTATATACTTGAAAATGGGTGATTACGGGCCTACGA
CGACGACCACAAATACTTCAAGTTTCGAACCGTTTAACGCAGATATTTTC
AAGGAAGCAAAATTGCAAAAGGAATTGAACGACAGTAAAGACTCTGATGA
AGGGTTTAGCTCATCATTTTCACCTACTAGTGAATCTTCCATGATTCAAG
GAGAGGCAATTTCTACAAGTTTACACCTGTGGGGTAACAACTCTGCTGAC
AAAGACGACCAATATTTTATCAATTCATTGGCTCCGGTGAGTTCAAATTC
CTCCTTTCTTCCTCAAAGTTCAAGACGTACAGCACAAGCACCATCTCCTA
TTCAAAATGTCAAGAAGCCCTCTCCTGCTTTATCAAATTATTTGGCCACA
AATAAAGCTGCAGCTCATTCGTTGGGAGTCTCATCAAATGGAAATGATTG
GAATCAACAACAACCCCCAACTCAAACTTCAAGTTGGCCCATGAACCCAC
CACCACCAAATCCCATTGGAACAAATGCTAATTGGAATTTGCCCCACATG
AAGAATGGTATGAGTACCCATACTCAATCTGCTCCTGCTTTGCAACACAT
GAATAATGCTCAACAGATTGCTTATCAACTTCAACAACAAAAGAATATGC
TGACCAAAACAAATGGAATCATGACAAACGGACACTCGTCTGGAAATCAC
CCTTTCCCTCCAAATATCGTACACTCGAAGAATATGAAGAATAGTATTCG
TGGTTTTCCTGCCTCCCAAGTTCCCCTTACTTCAACAGGAAGGgcccatc
atcatcatcataatcaTCATCATCTACCTCATCATGGAAACACAGGAATA
GATTCAACAATTGTTGAAGATATTGGGCATTTGACAAACAGTTTTTCAAA
TCTGTCTACAAGCAGTGAACACTCGCATTCAAATTCTCATCCTGCTAATG
GCTTTTCATCAAACCATcagGATAGACGCGGCGAGGATGGTATGAAATAC
TCATCCCTCGAAAGTCGCTTCCTTGGTGATGTATTCAAGTCACCAATCGA
TTCAGATAATCTCAATAACTATGACGCTTTTCGAGCATACAACAATCAAA
AGAGTAAAGGCTTCCCCAGAGCTAGAGAagATCAAATTGTTCCTTCTATT
GGCTCGTCATTAAATGGTTCTCCGAGATCTGACTTGGATTTTGGAATTGA
AAGATTCTCAAGAAAGGTTTTTGTTGGTGGACTCCCCCCAGACATCGATG
AAGATGAAATTCATGCAAGTTTTTGTAGATTTGGCCCCCTTACTGTTGAC
TGGCCCCACAAAGCAGAAAGCAAATCATATTTTCCTCCGAAAGggTATGC
ATTCCTCTTGTACAAAGATGAAATATCTGTGCAAAGACTCATTGATTGTT
GCATCATGCAAGATGGGAAACTCTATCTCTGTGTGTCTAGCCCAACAATC
AAAGACAAACCAGTCCAAATTCGACCATGGAATCTGGCTGATGCTGACTT
TGTCATGGATGGCTCACAACCCTTGGATCcaagaaaaaccatttttgttG
GTGGTGTCCCAAGACCTCTTCGTGCTGTTGAATTAGCCATGATCATGGAC
CGACTTTATGGCGGAGTCTGCTATGCTGGTATTGATGTTGACCCAGAACT
GAAATACCCAAAAGGTGCTGGAAGAGTTGCCTTTTCAAACCAACAAAGCT
ACATTGCCGCAATCAGTGCAAGATTCATTCAGCTGCAACATGGAGAAATT
GATAAGAGGGTTGAAGTTAAACCATATGTCCTAGATGATCAAATGTGCGA
TGAATGTCATGGTGTCAGATGTAATGGAAAATTTGCTCCATTCTTCTGtt
caaacatcacttgccttcAATATTATTGTGAGCAGTGTTGGGCAATCATT
CATGCAAGACCTGGACGTGAATTTCACAAGCCACTTGTCAAGGAAGGCGG
TGATCGTCCAAGACAAACAAGTCTTGGCTTGAGATGGCCCTTGAAAACCA
CACCCCTTGGTGGAATTCCTTCCATTCCATTACTTCAGTGATTGCCATAC
AAAATGGAATTGGAATCATCAATGGGatcaaaatcagaaagaaaaatttT
GGAGTGAACGTGTGGTGTTGCTTTTTACATTAAAAAAGTATGTACGATGT
TTTTGTGAACAACTGCTGACACACTCAACATTGGCAATCCACCATATCAT
ATTCATATTTTTATGTCCATTTCTGTGGAGAAGTTTCTTGTACGAGCTTT
CCTATGTTCATGTTGTTTACTGAAAGTTATTTATTGTTACTACTACCTTC
CagaataattttttaaagtaaattttttaagAGAATTCTTTTTTGATTCA
CCGTTACATATATTCTATTTATTCTTTTGTGCTGTGTTTTTTTTACTGAA
TGCTTGATTTGTATACCTCTTCCTGAAAGGTTGAATTATATTCAAGTCTA
CCTAAAGAATGGTTCAAACTACTTTTGGCGTGCAGTTTTCTGTCAGagaa
ttatttattttcttatagaattttttaaggttttcacACTTGTAGCTTAC
AGCGATCAGCagaatttcattttgttttagtAGTGAGATAACTTGACATT
TTTGGGGGCAAAGCAGCATTGATTTCCTTTTTTATATTAAATTTATGTAT
ATATTATATAGGTCCATGTTCCCAAATAACTTTCTTTAGCTATTATTCAA
GATTTAAGTTGAAGTTATTAAAAAATCCTTTATACATTTTAAATACGGTT
ATCTatgtttttaataagaaattAATAATAGTTTTTGGACTAGTTTTTAC
GTTTATCTGCTAtactatttttgttattttacattttttcttagttgaaa
atattttgtcactattattttaaaagattttttgccctttttatcataaa
gttcaaattttttgagagaaaaaaacataaaaataccaaaaaaatatcTC
GGTTATTATTACAAACTTTTACGTATTATTATATAAAGTATATATAttgt
attttatcatttttaaaactataatgatttttttgaaagggtataaatta
tcatttttttcagaaaaaagttacttttgaa
Run BLAST on NCBI

transcript from alignment at scaffold_354:800251..808537+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061099 ID=TCONS_00061099|Name=TCONS_00061099|organism=Clytia hemisphaerica|type=transcript|length=8287bp|location=Sequence derived from alignment at scaffold_354:800251..808537+ (Clytia hemisphaerica)
caaaatttgattaaattagGGATAATTTGTTCgaaatttttatttctgat
ttcAGCAAATCTTACAATCAAAACATACAAAAGAAGAGTGTCTAGATCAA
AACATGAGTTTGAAAGCTGCTGGTAAATCGTACCGAACAAGAGTAGGTTA
TTATTTTGGCGCGATTTGTTTTAGAAAGCAGCATTAAACATTGCAAGGTT
TCAAAATTCCGGGGGAGTAAAGCGCTTTGTATAGCGGCTTTCCAGGTTTC
ATTCTGAACTTTGGAGCGAAATCGGAAAATGAAACTAAATAATGGaccgg
aaaaatattttttattttgtcgtTTCACTGGAAAGATTTCACCTGCTCTT
ATCTTGTCACTCAATGAGAAAAATCCaatgtttgtaaaaattttctttac
ccCCGTCTATACAATCGAATTCATAAAGTAGAAGATTCCATGGAACACAG
AAAAATTCGATTGTATATCCGGGGGTCAAGACTCTTTTCTCTTCACGAAA
AATTTCAAGGTTATTGTTTGAAAACTATCAATCTGTTTATTTCTATCAAA
TATATTAAAATGATCTTTTGTTATCATTGAGTATAtgtaaaattaagaaa
aacagCTGCGTGGAATATTTTTCcacatttatatattttataaagtttta
ctACATAACCCCCTGATAGGTTTTGAACTTGTTTTCCTTTGCATCTTCAG
TTAATTTTATTGTTCGTCTCGCTCGTTCGTCGAGAGTggaagagaagaag
aaacaagttgaaattttcataCGTGGCGTGGCGTGTTGTGTGTAAAAACT
ACCTTTGGACattaaaaacgaaaataaatttggaaaaagaagacaaaaat
tGATAAGAGTGGAGGGTTAAATTTATATACTTGAAAATGGGTGATTACGG
GCCTACGACGACGACCACAAATACTTCAAGTTTCGAACCGTTTAACGCAG
ATATTTTCAAGGAAGCAAAATTGCAAAAGGAATTGAACGACAGTAAAGAC
TCTGATGAAGGGTTTAGCTCATCATTTTCACCTACTAGTGAATCTTCCAT
GATTCAAGGAGAGGCAATTTCTACAAGTTTACATCTGTGGGGTAACAACT
CTGCTGACAAAGACGACCAATATTTTATCAATTCATTGGCTCCGGTGAGT
TCAAATTCCTCCTTCCTTCCTCAAAGTTCAAGACGTACAGCACAAGCACC
ATCTCCTATTCAAAATGTCAAGAAGCCCTCTCCTGCTTTATCAAATTATT
TGGCCACAAATAAGGCTGCAGCTCATTCGTTGGGAGTCTCATCAAATGGA
AATGATTGGAATCAACAACAACCCCCAACTCAAACTTCAAGTTGGCCCAT
GAACCCNAAAACTAAATAATGGaccggaaaaatattttttattttgtcgt
TTCACTGGAAAGATTTCACCTGCTCTTATCTTGTCACTCAATGAGAAAAA
TCTaatgtttgtaaaaattttctttacccCCGTCTATACAATCGAATTCA
TAAAGTAGAAGATTCCATGGAACACAGAAAAATTCGATTGTATATCCGGG
GGTCAAGACTCTTTTCTCTTCACGAAAAATTTCAAGGTTATTGTTTGAAA
ACTATCAATCTGTTTATTTCTATCAAATATATTAAAATGATCTTTTGTTA
TCATTGAGTATAtgtaaaattaagaaaaacagCTGCGTGGAATATTTTTC
cacatttatatattttataaagttttactACATAACCCCCTGATAGGTTT
TGAACTTGTTTTCCTTTGCATCTTCAGTTAATTTTATTGTTCGTCTCGCT
CGTTCGTCGAGAGTggaagagaagaagaaacaagttgaaattttcataCG
TGGCGTGGCGTGTTGTGTGTAAAAACTACCTTTGGACattaaaaacgaaa
ataaatttggaaaaagaagacaaaaattGATAAGAGTGGAGGGTTAAATT
TATATACTTGAAAATGGGTGATTACGGGCCTACGACGACGACCACAAATA
CTTCAAGTTTCGAACCGTTTAACGCAGATATTTTCAAGGAAGCAAAATTG
CAAAAGGAATTGAACGACAGTAAAGACTCTGATGAAGGGTTTAGCTCATC
ATTTTCACCTACTAGTGAATCTTCCATGATTCAAGGAGAGGCAATTTCTA
CAAGTTTACACCTGTGGGGTAACAACTCTGCTGACAAAGACGACCAATAT
TTTATCAATTCATTGGCTCCGGTGAGTTCAAATTCCTCCTTTCTTCCTCA
AAGTTCAAGACGTACAGCACAAGCACCATCTCCTATTCAAAATGTCAAGA
AGCCCTCTCCTGCTTTATCAAATTATTTGGCCACAAATAAAGCTGCAGCT
CATTCGTTGGGAGTCTCATCAAATGGAAATGATTGGAATCAACAACAACC
CCCAACTCAAACTTCAAGTTGGCCCATGAACCCACCACCACCAAATCCCA
TTGGAACAAATGCTAATTGGAATTTGCCCCACATGAAGAATGGTATGAGT
ACCCATACTCAATCTGCTCCTGCTTTGCAACACATGAATAATGCTCAACA
GATTGCTTATCAACTTCAACAACAAAAGAATATGCTGACCAAAACAAATG
GAATCATGACAAACGGACACTCGTCTGGAAATCACCCTTTCCCTCCAAAT
ATCGTACACTCGAAGAATATGAAGAATAGTATTCGTGGTTTTCCTGCCTC
CCAAGTTCCCCTTACTTCAACAGGAAGGgcccatcatcatcatcataatc
aTCATCATCTACCTCATCATGGAAACACAGGAATAGATTCAACAATTGTT
GAAGATATTGGGCATTTGACAAACAGTTTTTCAAATCTGTCTACAAGCAG
TGAACACTCGCATTCAAATTCTCATCCTGCTAATGGCTTTTCATCAAACC
ATcaggtaaatattttttttcgcttctttttttctcaaatgtcTTGATAT
AGTTTTGTGTAAAGAGTGGTtcataatatttttcatttttatttttggta
tcTTAGCgacatttttgaaaacaaaagaagtgCGTCGACCAGAGAGAGGT
TTTGTTACTacgaaaagttttttatttagaatcagcttttttgacaaata
atattttcatttctagtTATGACATCCATGCATACTTTTATGataaacag
tagaattttcTCTCTGAATATTTAGATATCTTTTGTTTGCTGAGAGTTCT
CGTAATAAAAAATTTAGCTAGCTTTCTCTTGAAGGGGGCAggtgttatga
aaaaaaaagtttttttttattgcatGATGTGTTAAGATATAAAAAGGTTT
TTCATACTGAAACATGTTGGATTGTGTGAAAAGAACGCATGTCCATATAT
TTTCTGTTTCTCACCCGGCTACTTTTCTCTTTTTCCTCTCAAAAAATTTA
TGCAATCTTTTTCATTGCACCgcgaaaaaataacaaaagaaaactcTCAG
AAACCGCTTTCCAAGTAGACAAAACGTTTGACTTACTGctcaaaaattat
aagaaaaattacaaGATTAAAATGAATTACGAAAAAGTATGAAAGAAAAT
ATAGTAATTGGAAAGAATTATTTTATTGTTGTGTCAGTAACGATTGATTG
GGTGACCTAATTGACCTTTTTGTCACTTTAAATTCAAAGTGTGTTGTTAA
TTGATCAATGTTTATTGTGAACATGTGTTTCTTGTCAGACGCACATGGAT
GAACTGTATTTGCTTTTAGCGTAGTACACCGGTGCTTCTACGTCAGGCAC
GTGTTTTAATTTATAGAAAAATGGACAGAAAAAATAAGCTTTTTTCTATT
CGAGTCTCATTTCTATCTGTGAGCTTCAGTGAGTAAACAAGTTTGTCTTG
AATACAGTTGAATAATGAAGCTGTATTTCCAATTTCAGGATAGACGCGGC
GAGGATGGTATGAAATACTCATCCCTCGAAAGTCGCTTCCTTGGTGATGT
ATTCAAGTCACCAATCGATTCAGATAATCTCAATAACTATGACGGTAAGT
TGGTTTTCAATCTagccattttttaaaaagattttaacaatattgcattc
tgttttttcttctatttgACCTCCCCTACTTTTTTTGTCCATCATTTGCT
TTGAATTATGTATAACTTTAACGAGGCTATTCAGCGCATTCAAAAACGTG
TTTTGGCTTGAATAATGCGCCGTTTCGACATTAATTAGTTTTTgccgttt
tgattttttcataatGCTGTCCCTAGTTGCTAGGAGACAAGTGCACCGAT
TAAATATTACAAGTGATTTTTTCTTGCAGCTTTTCGAGCATACAACAATC
AAAAGAGTAAAGGCTTCCCCAGAGCTAGAGAaggtttgtttattttatta
gtatgttaacTGTAAATGCTTTAAAGGGGTTATTGTGTAATATTGATTAG
GCTTTTACTTTGCCCCCTTTCTTACCCTTGATCAAAAGATAGATCGTCTT
TCGAGTGACTCACTTTCTTCAATTGCTATTACtatattttcccatttttt
aaTTCTTCAGATCAAATTGTTCCTTCTATTGGCTCGTCATTAAATGGTTC
TCCGAGATCTGACTTGGATTTTGGAATTGAAAGATTCTCAAGAAAGGTTT
TTGTTGGTGGACTCCCCCCAGACATCGATGAAGGTAAGTAGGAAACTtct
cttatttatttatttattgtgAAACCATTGTTCAATGACAACATCGAGCT
TGATTATGACTCATTGGCATTTAGAACTTGTCCCCATGAGATAGGAACAT
CTGcagtattttcattgtttgaagggagaagaaaacaaaaagaagtcATT
AAATATGCATCCCCCTgtacattttgatcaaaatttttcttttcattttc
gcTTCCCCATcttcttattttttattatattaaatAGATTATATctggtt
tacaaaaatatggCACCCTGAAAGGCTTTTCTCCTTTATCATAGACACAT
TTATTATTCCTTATTTTGGGAAAACATGAGTAATTTCTAAATTTATTCAC
AATTTCTCTGCTCTTATTTTTTAGATGAAATTCATGCAAGTTTTTGTAGA
TTTGGCCCCCTTACTGTTGACTGGCCCCACAAAGCAGAAAGCAAATCATA
TTTTCCTCCGAAAGGTAGATTTCTAATAATTTGACATTCCTCTCATTAAT
TTTGTATTGTCCTAATGCTCAATGTCACATAACATAGCGATNcccccccc
cccccaattatATTATGTCCCCAAAAATTATTGTACTTCCAGCCCACTCC
TATTTATGGAAAGGAGGGTGTAACCCCCTCTTTCCGGGGGGGCTGATGAT
CAGGATAAAGTGTTGGTTCTGGTTGGTTCGCTCCTGGGTTGATCTATCTC
AAAGCAATGGCTCCACCCTTCAATACTAAACAGAAGGCTATTGTGTATCC
CCTTTATCActttgttacatactttttaaactcttaaattcttttttagg
gTATGCATTCCTCTTGTACAAAGATGAAATATCTGTGCAAAGACTCATTG
ATTGTTGCATCATGCAAGATGGGAAACTCTATCTCTGTGTGTCTAGCCCA
ACAATCAAAGACAAACCAGTCCAAATTCGACCATGGAATCTGGCTGATGC
TGACTTTGTCATGGATGGCTCACAACCCTTGGATCcaagaaaaaccattt
ttgttGGTGGTGTCCCAAGACCTCTTCGTGCTGTTGAATTAGCCATGATC
ATGGACCGACTTTATGGCGGAGTCTGCTATGCTGGTATTGATGTTGACCC
AGAACTGAAATACCCAAAAGGTGCTGGAAGAGTTGCCTTTTCAAACCAAC
AAAGCTACATTGCCGCAATCAGTGCAAGATTCATTCAGCTGCAACATGGA
GAAATTGATAAGAGGGTAAGTGTCAACTTATAGCAAATCCAAGCTCGCTA
TAGTTGCTTTAGCTCACCTGAATGACAATGTTTGACAATTCTTGAATAAT
TATCGAATTAACTTCACCTTACTTTTAATGGCCCTGCAAATAACTACTGT
GTTTTTAGTTACTTTAATCTTGTTGAATCTTTCCATTGTCCAGGTTGAAG
TTAAACCATATGTCCTAGATGATCAAATGTGCGATGAATGTCATGGTGTC
AGATGTAATGGAAAATTTGCTCCATTCTTCTGttcaaacatcacttgcct
tcAATATTATTGTGAGCAGTGTTGGGCAATCATTCATGCAAGACCTGGAC
GTGAATTTCACAAGCCACTTGTCAAGGAAGGCGGTGATCGTCCAAGACAA
ACAAGTCTTGGCTTGAGATGGTAAGCTACTACTTACATTTCCACTAACAG
TGGTTGCCTTGGCAGATTGTCAAccaaattaaaattaattttgttaatCA
AAAATTTCCACAAAAAATATTAAGGTCATATCAGATTGTGCATCGTGGGA
ATAGAATTTTGCATTGTACTTCATTAAGTGGATTTGTGGaattatatttc
ttttgttttaaatctcTCCTTTTTTTTCTGTTCAGGCCCTTGAAAACCAC
ACCCCTTGGTGGAATTCCTTCCATTCCATTACTTCAGTGATTGCCATACA
AAATGGAATTGGAATCATCAATGGGatcaaaatcagaaagaaaaatttgt
aaataatacTTTTCTTATTACTTTCTAAAAATTAGCATTGCTAGTTAATG
cctattttttattaaaatgaaaACGACAGTTTAATGCAGCAGAGGTCAAA
TCAAGCTCTTTTCCAagtcaatgataaaattttaccTTCTTTGAAGCATA
GTATTTGCTCTCAGCTGTATTACTGTCCAGATtacattttttattacttt
ctttcTTACATTCCACTTCAGCtgcatttcttttttatttgacatggaaa
aagttttttctaaaCATAGATATTTTAAACGTCTGAAATGCTAAGTTTTC
TTCTGTCATGCAAGTTTATTAAAATTCTTTAATTTGATAATTTCTTATTT
CTGGCTGTGCCAGGCTTCAAAGGCTTTTTTTGATGTGCACTTAAAAAAAT
GCTTAACACTTTTTAGTCATCGCCTTatttcttgcaatttttttaacaac
tGATATCTTATAGAAAAGTTGGCATTTTTATGTTTAATACTTAGTTTTTT
GTATTTGTTGGGTTTCGATACTAATTATTAGTTCATTAGCCCAGCTGAAT
TCACGATTTTTTCCaatagtttgttttttaagaaagagtttatttttatt
ttcaagtgacattttttcaaagcaaaatttagaATTAGTTTCTACTGATT
AATTGTTTAAATGTTAGTAGGTATAGTCTTTTGAAGCATCTGCTCTATTT
TTAAGTGGAGTGAACGTGTGGTGTTGCTTTTTACATTAAAAAAGTATGTA
CGATGTTTTTGTGAACAACTGCTGACACACTCAACATTGGCAATCCACCA
TATCATATTCATATTTTTATGTCCATTTCTGTGGAGAAGTTTCTTGTACG
AGCTTTCCTATGTTCATGTTGTTTACTGAAAGTTATTTATTGTTACTACT
ACCTTCCagaataattttttaaagtaaattttttaagAGAATTCTTTTTT
GATTCACCGTTACATATATTCTATTTATTCTTTTGTGCTGTGTTTTTTTT
ACTGAATGCTTGATTTGTATACCTCTTCCTGAAAGGTTGAATTATATTCA
AGTCTACCTAAAGAATGGTTCAAACTACTTTTGGCGTGCAGTTTTCTGTC
AGagaattatttattttcttatagaattttttaaggttttcacACTTGTA
GCTTACAGCGATCAGCagaatttcattttgttttagtAGTGAGATAACTT
GACATTTTTGGGGGCAAAGCAGCATTGATTTCCTTTTTTATATTAAATTT
ATGTATATATTATATAGGTCCATGTTCCCAAATAACTTTCTTTAGCTATT
ATTCAAGATTTAAGTTGAAGTTATTAAAAAATCCTTTATACATTTTAAAT
ACGGTTATCTatgtttttaataagaaattAATAATAGTTTTTGGACTAGT
TTTTACGTTTATCTGCTAtactatttttgttattttacattttttcttag
ttgaaaatattttgtcactattattttaaaagattttttgccctttttat
cataaagttcaaattttttgagagaaaaaaacataaaaataccaaaaaaa
tatcTCGGTTATTATTACAAACTTTTACGTATTATTATATAAAGTATATA
TAttgtattttatcatttttaaaactataatgatttttttgaaagggtat
aaattatcatttttttcagaaaaaagttacttttgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038336XLOC_038336Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061099-exon-scaffold_354-1491911889:800251..800392TCONS_00061099-exon-scaffold_354-1491911889:800251..800392Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:800251..800392TCONS_00061099-exon-scaffold_354-1510915933:800251..800392Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:800251..800392TCONS_00061099-exon-scaffold_354-1575043694:800251..800392Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:802028..803155TCONS_00061099-exon-scaffold_354-1491911889:802028..803155Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:802028..803155TCONS_00061099-exon-scaffold_354-1510915933:802028..803155Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:802028..803155TCONS_00061099-exon-scaffold_354-1575043694:802028..803155Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:804139..804244TCONS_00061099-exon-scaffold_354-1491911889:804139..804244Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:804139..804244TCONS_00061099-exon-scaffold_354-1510915933:804139..804244Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:804139..804244TCONS_00061099-exon-scaffold_354-1575043694:804139..804244Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:804530..804583TCONS_00061099-exon-scaffold_354-1491911889:804530..804583Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:804530..804583TCONS_00061099-exon-scaffold_354-1510915933:804530..804583Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:804530..804583TCONS_00061099-exon-scaffold_354-1575043694:804530..804583Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:804761..804883TCONS_00061099-exon-scaffold_354-1491911889:804761..804883Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:804761..804883TCONS_00061099-exon-scaffold_354-1510915933:804761..804883Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:804761..804883TCONS_00061099-exon-scaffold_354-1575043694:804761..804883Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:805275..805364TCONS_00061099-exon-scaffold_354-1491911889:805275..805364Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:805275..805364TCONS_00061099-exon-scaffold_354-1510915933:805275..805364Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:805275..805364TCONS_00061099-exon-scaffold_354-1575043694:805275..805364Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:805700..806115TCONS_00061099-exon-scaffold_354-1491911889:805700..806115Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:805700..806115TCONS_00061099-exon-scaffold_354-1510915933:805700..806115Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:805700..806115TCONS_00061099-exon-scaffold_354-1575043694:805700..806115Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:806294..806520TCONS_00061099-exon-scaffold_354-1491911889:806294..806520Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:806294..806520TCONS_00061099-exon-scaffold_354-1510915933:806294..806520Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:806294..806520TCONS_00061099-exon-scaffold_354-1575043694:806294..806520Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:806736..806848TCONS_00061099-exon-scaffold_354-1491911889:806736..806848Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:806736..806848TCONS_00061099-exon-scaffold_354-1510915933:806736..806848Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:806736..806848TCONS_00061099-exon-scaffold_354-1575043694:806736..806848Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1491911889:807556..808537TCONS_00061099-exon-scaffold_354-1491911889:807556..808537Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1510915933:807556..808537TCONS_00061099-exon-scaffold_354-1510915933:807556..808537Clytia hemisphaericaexon
TCONS_00061099-exon-scaffold_354-1575043694:807556..808537TCONS_00061099-exon-scaffold_354-1575043694:807556..808537Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:800251..808537 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.925173	0.910209	0.405243	0.152683	66.6517	62.3062	74.2595	84.24	20.6916	28.741	24.5049	20.4527	20.4775	18.6121	15.6971	34.6966	26.3509	25.9295	8.51101	12.5577	17.7962	15.5851	8.72936	11.8689	178.184	150.061	8.98952	5.08552	4.65525	5.06807
Blast
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BLAST of TCONS_00061099 vs. Swiss-Prot (Human)
Match: CPEB4 (Cytoplasmic polyadenylation element-binding protein 4 OS=Homo sapiens GN=CPEB4 PE=1 SV=1)

HSP 1 Score: 505.753 bits (1301), Expect = 1.804e-163
Identity = 233/264 (88.26%), Postives = 245/264 (92.80%), Query Frame = 2 
Query: 1496 IERFSRKVFVGGLPPDIDEDEIHASFCRFGPLTVDWPHKAESKSYFPPKGYAFLLYKDEISVQRLIDCCIMQDGKLYLCVSSPTIKDKPVQIRPWNLADADFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDVDPELKYPKGAGRVAFSNQQSYIAAISARFIQLQHGEIDKRVEVKPYVLDDQMCDECHGVRCNGKFAPFFCSNITCLQYYCEQCWAIIHARPGREFHKPLVKEGGDRPRQTSLGLRW 2287
            +ER+SRKVFVGGLPPDIDEDEI ASF RFGPL VDWPHKAESKSYFPPKGYAFLL++DE SVQ LID CI +DGKLYLCVSSPTIKDKPVQIRPWNL+D+DFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID DPELKYPKGAGRVAFSNQQSYIAAISARF+QLQHGEIDKRVEVKPYVLDDQ+CDEC G RC GKFAPFFC+N+TCLQYYCE CWA IH+R GREFHKPLVKEGGDRPR  S   RW
Sbjct:  467 VERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHIS--FRW 728
The following BLAST results are available for this feature:
BLAST of TCONS_00061099 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CPEB41.804e-16388.26Cytoplasmic polyadenylation element-binding protei... [more]
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