XLOC_036835 (gene) - C. hemisphaerica

Overview
NameXLOC_036835
Unique NameXLOC_036835
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:610500..619845+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036835 ID=XLOC_036835|Name=XLOC_036835|organism=Clytia hemisphaerica|type=gene|length=9346bp|location=Sequence derived from alignment at scaffold_311:610500..619845+ (Clytia hemisphaerica)
CGATTGGGGTAGTACCCTACCTTTTGGGAACACCCAAGccaaatcaatat ttttacatgttGGATCATAAGGTGGAAATTTGAGATTTGATGTGTGATTT GggctttttttctcaattttattgTGATGGTCTAATTTTGAGCAATATTT GCTGTTTCTTATGagttatcaatattttttgtctttttcagcTTCAGAGA ATGTTTATAAATGAAACTTATCAACTTAggccaattttttaaatacaaaC AGAATCTTCAATTGAATGTTAGATTGGTAAGGAATATAAGCGATTTAAAA CATAAAGCATTGAAAGTTGCTTTCTTTGGAACTGATGAATTTAGTTTAAC ACCATTGGAAAAACTTGTTCAATTGAGGTGAGTTATTTATCATAAGTCTT CTTTTTTAAAAGTAATGTTTGTTTATTTATATGTTATTTTACATTAATGC CAGTGCTGAATGTACCTTCATCTGGGCCGACCAATGTCGTGTCAAGAGAA GTAGGTACCACTGCCCTGATCTTCAAGGGTCTTTGGTGCGGTATGGACAG CTGTTATGTTCCAACTAAAAGAAATGCAGTATTTGTCCCATACATTTGAT TTCTCATGAAAGTGTGTGCTTTACTGAGATATTACAATTTCTACTACAAA CAAGTTCTAGCCTCTTTAGCGCATCTCActaacaaatttatttttagaaa cGAAACAAACCTTGTAGAGGAGGTGGCAGTCGTTTCTCAATTTGAAACCC AAAAGGTAACACATGAATTACAAACTTAAAAATCCAATCAGTATGTGGTA cttactttttggacctaccccggtggggtggaggtcctataaattaaccc gtgttcgttagttagttagttcgttcgttagttaccaccttttctcgaga ttggctcattcaatttttctgattttttgcacaaaggtgcattactataa accctcgaatgtgacggagcccgattttcgaaaaaaaaaattttccggcc ggtagaaccggaaatgtcccgaaaaagcggttttttgtcGAGAttttttc attagttttttgcgattttttgcacatagatgcacattagtactgccgaa aaggtgtcgaaaaccgtttgccgaaaaaaaaatttttccgggcTGTAGAA CCGGAattgtgccggaaatcgtcgttttttcacatttccgtcacgttttt tcaacttatttaattgtttctttacagaaaaatgttctttatgatgatgc ccaaaacttagcatcgtttgatttccaaaaactcatcctttgaatccgga attccttaaaaatcgccggaacagccgaaaaccggcgtaaaacggttttc cttcattttagGAACTTATActtgacagattttcatgattttttgcacaa tgatgtaaaatggcaatgcccaaaatgtgacagggcccaattttcgaaaa aggaatttttccggccgctagaaccggaaatgtcccgaaaaaagcggttt tttgagatttttttttttttgcgattttttgcacatagatgcacattagt actgccgaaaaggtgtcgaaaaccgtttgtcgaaaaaaaattttttccgg tctgtagaacctgAAATGTGCAGGAAATcttcgtttttttcacatttccg tcacattttttcaacttatttaattgtttctttacagaaaaatgttcttt atgatgatgcccaaaacttagcattgtttgattNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNTTAAAAATcgcaaacgactaattttaatagatcgtcactatttgtgtt ctgaatgattgtttaacggtcatgctcacgtagatatcaattaaattata tatgtgttaaatgcataaccaggtaggtccataaaagtatcacttgtttg cttaattttcaaagtaaatttttttttcacggtAAGAATTTTCTCTCTCT TATCCTCTTGTATATTGactaaattttatttattatttttctggAGTAGA AGAAGCAATACCTTGTATTGAAACtgatatgaaaacaaaaaatatgtaaa atcatcaaaatccatagattattttcatttcatccaTAGAAATCTACTAA AGGCATTATTCCAGTAGTCCATAGATATGTCAGAGAAAATGAACTACCAA AAATTCATTGGGAAGAGTTGAAGATAAATCCAAAGTATGCTTTTTTTTAA GAGAATCTAAATTTGGAAGGTCTAAATTGTCACTGACATAGACCCCAAAT GAGACATATCTTTTTCGTTATTAAACAGTCTTCCTCCACCACTAAGATCG TCTTTTTGAACCCCTGGATTTCACTTCCTTGAGCTAGGCAAATGTAGGTA TGTCTTAAAATAGGGTTTCATATGGACCCCCTCGTCGTCGTACAACCTTC TCAAcatggatttttgaaaaagcctAATTAAAATCCATCTTTTAATAAAT GACTTAATTaattttaaatactttttttaaagacatCATCTCGATCATGA TTTGGCTATAGTTGCTTCTTTCGGTGAATTCATCCCTTCGAAGGTTATCA AGTGTTTTCCAAAGTAAGTTACATTGTCTgtcttttattgacaattttct ttatcaaaacaCCCTTTTGGTACAGAtgcaatttttgtttacattatgTG AACAAGATGGGAGCTgaagttttcaaaattcatttctaTTTGCAAACTAA AGCTACCTGATAATGATATACAAGTAAGTAAAgcacaacctcgttccctg cgcactatcagcttttttatgcttactgatagtgcTAGACAAAAGAAGtt gcatcagccaacaccagggtattctctggcgccaatcagtaacgtaaata aagcctgaatacacggggacgaggttgagtaAAGCAATGAATCTCTTTGA CTTTTGTTCTTGATTTATATGTTTCTTACTTTTGATTTTATGAAACTCAT GATTTATTACTATTGCAGGGGTGCTATCAATATTCATCCTTCCTTGCTAC CAAGATGGCGGGGAGCTTCACCACTGATCCATACTATCCTTGCCGGTGAT ACAGTGACTGGAATTTCGTTCATTGAAATCTCACCCAAAAAGTATGTTGA CATTTTTCTAAAGAAGATTATATTGATTATTTACTATAATgtcaagaaag tttttttggttATATACAAAAAACTATTGTTTTCCTTGTTGGTTATAACA TCATCCCCTCTACTATAGAAAGTCTTTTAACGTTGCTGGGCCAAGTGTTG GAACGTGGAGTTTTTCTGTACaatgtttttcctttttgatgaaataattt tgtttcGATTTAGATTTGATATTGGAAAGATCCTCTATCAAGCAGAGTTC CAGGTAGATCTATAGTTCATTCTGCCTTGTGGAAACAATGCTATTGCAAT ttaactaccttaagggaagaaatttttgcggagcTTAATTTCGCGGCTCA CAGCTTGAAATTCGaaagttttgcggaatttaatttcgcggttgagagga ttttttgtttacaatatggcctaaaaaggcaaattttaaaaatgaatggt ctttagagcaaaataaataaaatactgaATACtcttcggggggggggggg gtttttttttccCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNggggggggggggggtattatTCTATCCCTTATTTCAAGC TTTTAGGATGAATTTCTAATTTCTGTACCTCTTCAGTTTACAGGATTTGT TTGCCAATACactcattttttataagcatacgggaaaTTGGGACGAGGCT CAATttgcttagcaaaatctcattttcagccttaatttatgcttTTTTAT ATGCGTAGACTTTCTTGTAGATTCGTTAATTTTCTTTGGATTCATGgaaa tttcatgaatttttaagtcggaacattgattcggctcaaagaatgaaagt tttctttgtaatttggcacTGCAGggaaaatctttggtctaaAAAGCTCA AATAGCTTGAAAAGTAACCCTTAAAGGTCAGTGTTTTAGAAGAGCTACAT GAATTTCttgcatttcagcttggaggtatgcttagcattttGCATATTAT TTTTGCTGAATTCGAGCATAAGTATGCTTATTATAAACGTTGATTaacgt ttttgaaaaaaaatatgacatctaatatttttcatattttatttttatca aataattaGATCCCACCTCGATGTACAACTGAAAATTTGAGAGacatttt atcaaataaagCTGCTGACTTGGTAAGAGAAGTTCAATTTTGAGTATTTC ACCAGTACTTTGGTTGCGATTTCAGACTTTTTATTTATCCAAGAATATCG AATAAATTCAGTTAAAGTTAAAGTCAGTTAAAGGTGTTTTTGAATTAGGt attattgttttgatcatCCTATTTCGATTGGAAATTTCAATGTGGTTCCA GTCCATGCTTCGAAAAGACGGGCAAACAGTGTGCGTTTTATTAAGTTCCa gtcgacgctctctaattcgatgttctaCTATTCTTAGATTTATTGAAAGT CGCCATTAGTAAGAAAGTctcccttttttgaaaaaaaaatctaattcctt ttgaaaatcagagcgtcaactgtattattTTTGTAGCTACCAGaagtaat tgacaatttacCAACGTTGAGGGAGAATTCAATTGACCAAGATGACTCTG AAACAACTCATGGTAAGGAAGATCATATTGAGACCTCCCAATTTGAAGGG CTGTTCCACTTTTGGACACACGTGTTCACCCCATATCACGTTAACTCGAC TGGTTTTTACGCTGTTTTATAGCCCTGCaatacaactgtcaatcattttt aagaaaactgattGGATGATTAATGTCACGTGGCCGGTCAATATTTCCCC ATAGTGACCagttatgaaattgacatcattaaaatgtcaatttttacgat gtaaaacaatagaatacacttgttaattacttttattactttattttcgC AGGGCTATAAATGGATTATTAACCTCAGAAGCCTGTCTCTCTTGCAAAAT ATCGACCTCGTTCGCtcgtattttaaaaatttcttgaaaatattcACAAG ACAAAACTTATTTACAGCCGATAATTAGTGAGTGAAAATCTATTCAGAAA ATAGGCGAAAAGTTGCACAGACCTGTGAAAATCTCTTTAATGCATGAATT TAGCTTAGGAATTAATTTTGGAAGTAAGCGTATTATGATATTATAATATA CCATGAGAATCATGAAAAGTGATTGTACTGTTTCGTGGTGAATAACGCTG GATTTGAATATTTCATTCACACTAATCTGAAAAATCTGATAAACGGATTT CTCTCACTAGAAAGTCTCTGTATctctttaaaatcaaaaaatttagtttt tgtgaTATGCAAACAATTTTTCTACACATAGAAGTGGTCTGACACAAGAC TTTTTTCAGTATATGTCCTTTTTAATTTTAGCACCAAAGATATCAAAGAC GGTGGGTTACATTGATTTTCATGAACAGAATTGTGACGAAATCGAGCGAA CTTATCGAGCTGTTGGTCAACGGGTAAGGATTCGTGAAATTGGGCTTCAT GgataattttgtgaattttttaatGGAATTCGATTCCATGACAAAATATT CCTTCATGGATAATTTTGTGAAATTGTTAATGGAATTCGATTCCATGACA AAATATTCCATTAATTTTTgcgaaacattaaaaaaattcttttttcagac ATTCGATGAATTCGTTTTTCCgcaaaaaagctaaattttctgaaattaaa atGCTCTCGTGTACTTCTTTATTAAGAtaacaaaatattaattttaatTA GGGATACTTTTAGACAGCAGTGGCTGGAAATGCTTCCTGCCTCTGTGATT CGCAGCGCTCCTAGTTCCACTCCAGACCCACCTTAAAGGACTGAAAGAAA TCGAGCAATCCCTTGTGATACCATTGGTACTTAACGGGTCAAATATCATT GTTTACATTTCGTAAAAACCAAGGGCTTTACCAAATTTAGTTTAATTTCT ACATTGTATTGAGATGAGATTTCAGCTTAAAAATGACGAAGTGATTTAAA CACACtcaggcaattacttttttattttctggtttacggaatcGCCGAcg tttttttcgcaaaaatgaaataaaaataaaattggattttacaaatattt tatttatttatgctCTTCCGACCTTGTACTGAACAGCCATAAAAAGGaaa ctttaaataaaattacattttataaaagcaaaaagGGCAAGTAAAAGGGT CAGTGTCCAGGCCTTTAATAACTTAAACACAATTTCCCTACTAAAAACGT TCTTTAATGTATGTaagttttctcaaaacattattttaattttttacaac attaaagtttgaaaagagcaattttatctccaaatgtccgtaaaccagaa aataaaaaagtaattgcctcaTACATAAAAAGGTGGGCGTTTTCGGCGGA TACTTGGTTGTTTTTAAAGATAATCTTTTTGAATTAAATCTTTTATTTTA GGTTGGTATTAAATCATTATGGGGTGGAAAACAAGTAAAGCTCGAGAATA TTGTAGACATCAAAATGGAAAATGGTAATTTAAAGCTGATAAACTTTTCC ACGAATGTTCGCAGTTTTTCATCTCTGAAAAAAGCAATCAAACTTTCCCA CTTTTTCTAATGGGCTTGATTTATCACATATTAGAAAAGTCTGCTGTTTG AATTTGATGACCGTtagtttgttttgaatattcaTGATaagaaacaatat tttttttttcagagtcCGAAATAACACCAGGGACTTGCcaatattcgaaa aaagaacGAATGATTTGGATAAAATGCAAGGTATGCATAGTGTGCATATA TTTCATCCccctattttaaaaatttttcgaacCTGCACCAACTACAATCG TGGTTCACAAACCGAAATCCCCCATTTTACTCggaaaatctcttatttct cctATAAAGCCTATGAAAAGTTGGATCCCCCCTTAAAGAAGGGGTCACAC TATGATGTTATGAAGTGTTTGGACAAAAAACggaaaaggttttgttttaa agaaaaCTAGTATAAAATAAACTTGGAAAAGTTAAAGTCTTTCACGTTCA TTCAATAGAAATCCCGACCACTGTCGCAATCATATTTTTTAAAAGTCACT TCTGTTTTTCTGGAACTGTAAGGATgatattcgattttttttaccATAGA CTGGTTGGGTTGGTGTGGATGGATTTCAATTCGATCAACGAAAGAAAATA ATCTCCGCTCAATCGTTTTACAATGGTTACGTCATTGATAAACAGACTGG AAAACCTGGAAGCACAAAGTTCGAAACGATGATTGAATGACACTTCGGAG AACAATTTGAGCTTCAAAATGAGGGAAAGATGAAGGTCTGGTTCTCTACA GAAATTCAGTGTTAGCCTTGGAAACTTTAATAATCATTGCTGTGAAGTCA TAATATCACCATGATTATTCTTACATCGCGGTTGAAATCTACTTTATCAG CTGcttaaatatcatatttcatggAGTGCCCTAGAATATCGCCCTCCTAC CTCTTTAAATGAATGATTGAACAGCTTTAAAAGTTATTTGACAAAGTGAA GCACCGTCAGGCGAGATTCAAATGACGGAGGTTGTAGGTTGAAATTGATA CACCTGCGATTTTCTCAAGGAGTTATTATTCGTGAAAAACAGTTCAGAAC GCCGGATGGATTCCAGTCccacaatgtttaaaaattgtaaaaggggACTA GTAACTAATTGTAGTATTTTCTGTTATTGTTCACTGCAAAGATATTTACA TGAATGTATTGTTATATAGATTTCAGGGTATGCTTTTTGTTATGATTTGC CGAACAAAAGAGTCTAAGAGAACAATTTTCCTCCAAAGGTTTTTTTGTCA GGTTggattcattttttttgtttttagttaATCCAAGGAAGAACATCTTC AATCTTCAGGTTTTTTTGGATCAAGATCAAGTTCTTTAAAACAATACAGT ATGTTGCTTGCGTTTTTCCTGCTGTTATCGCTTTCCATTAGGTGTGAAGT TAGTTGTACTAAAAAATTTGGTCAGAAAAATGATGGGATGGCTAAAAATG CCTTTAACTCAACTAAAGTAAGTACTTGATTTAAAGAATTTCCGACTAAA GGGGGTATTTAGAGCGGGTTTTTGTGGTATTTTGCTCCTCTCGATCCTTT TAAACttctttttgatcaattttacATGGAGCGCTCTTATAGTTTGTGAA AGGAAATTAGTAACTTggcatttttgcaaaaataaagaaacctGCTTGAA AAAACTCGAACATGCACGTTGATCACAAATTTGTCAGAGTTAAAGAAATT CGATATAGGGTTCTTCCCGAAAATGtccgtgggggggggggggggggggg aggatatagtgtccggggggtagtgaaatttacaaaatttgccttgtccg gaggtaaatttgctttgtttgggggtaattttgctcggGGTAAATTTCCC AGAAATGTTACATCCTCCACTCCCCCCCtcatattcaattatttttttga aaaacccATAGAGGTTCGCGTGCGTTAAAAAGGCGATAACCATTACAAGA ATCATCTCATCTTATCGTTAACTTGGAGACTTCTTGTTCATTCCAAGGGA TCTCGTCGCGAGTGGATCGGTTATTCGCTTCCTTTTGTTGAAAATTACGC GTAATGAATTAACGTCTTCTGCTTTTTAAGGTTGATAAGTCAGCGAATGT TTGTTTGAATGGACGTGATGGAATAAATGGGATCAACGGTAGAGATGGCC GAGATGGTATGACTATTTTATTCACTATATAGACTATGAACTGAGTTGAG tttgaaattatcttttttcgcctcaatttgaaaaagaagtgtattttgtt tttttgtatctTCAAAATGAGTTCTGTTTTATTGCCCTCTTCTGAATTGa cttactttaggcgtacaaactttcgcgatttttgctaattttggcccttt tcgccaaagtaaatgtctttgaaaattctaaacagGGCAATTCgggaaag tttatgctcgcgaaaaattctcaaaaaaaaagacaatctataaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058455TCONS_00058455Clytia hemisphaericatranscript
TCONS_00058456TCONS_00058456Clytia hemisphaericatranscript
TCONS_00058457TCONS_00058457Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058456-proteinTCONS_00058456-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:610500..619845 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MTFMTmethionyl-tRNA formyltransferase, mitochondrial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.5 22.69 12.67 11.62 20.62 15.83 12.13 12.03 7.56 7.74 5.48 5.9 6.29 4.25 7.11 5.28 10.78 8.47 3.14 4.43 7.48 9.22 13.99 13.28 5.66 6.15 4.08 3.07 9.78 12.21