XLOC_036533 (gene) - C. hemisphaerica

Overview
NameXLOC_036533
Unique NameXLOC_036533
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_302:387160..397377+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036533 ID=XLOC_036533|Name=XLOC_036533|organism=Clytia hemisphaerica|type=gene|length=10218bp|location=Sequence derived from alignment at scaffold_302:387160..397377+ (Clytia hemisphaerica)
AAACTCTTTATTGCCATTTTCTAAAAGTTATGCGTGACGGTTTATTTCAT
TGTAATCAGCTTTTCAATGAGATTGGTAATATGATTGCGTACTATTATAT
TCTTCGCTTATTATTCGCTTTTTAATGATATTAGCGCAACTGTTACGTGT
GTTTGTTGAAAGGTATAAAAGGGAGTCGACGCTTACCTAGTCTAGTAGTA
CCATATTCTAACGAGGTGAATGCTGATAAACCACTGAGAATACCAGAAGC
TGAAACTATGGTAAGAATAGGTTATCTCTTATTGTCTTGTATACTTAGCT
CAAAAAAGGtcctaaatttgaaaaaagatattgttGCTGAAATTCGACAC
AAGGAGGCTCCTCCTAGAACCtcccgaaaaaaaaaactgGAATTAAATCA
AAAGTGTTGGATCACTTTTTTTTAGGCGGGGGTTATGATGTCCACTGTCC
ACTATAAAttcttgcaaaaaaatttttttaaacgttttcaaaaatcaatt
tatcaTATTCATATCATATAACCACATTATTACATACATTTAGATATACT
TTAGGCATACAAACTATcagcccttttcgcgaaagtaattttctttgata
attctttgaaagGGCCATTTGCAAATCTGTAAAGATTTTAACTTAggata
aaatgtaaaatttatggCACTGTATAGCCTGTTAAAAGTTTCATAAATTC
AAAAGACAAAAGTTCGAAAGTTTCAAcctaattatttattttttacccta
agtatttgtccctctaagtcATTTGTTCATaagaaaatattcatttttat
gtcttgattcgcgatagtttctgcttgcgaaagtttgtGCGCCTAAAATA
CAATGTGTCCCAAAAAAGCAGAAAACTGACCGTATGAGTCCCTTATGAgt
cctttttccaagcttcccaaagtgcagtGTAAAGGTCAAAATGAGTaaat
atgaaaagaaaaagtgcACTTTAAGGGTGTAGAATCCCACGATATTTTAT
CTTACCGACCTTTTTACCTTTAGTGCCCCCCCGGGCTGGGTTTGTATCTG
TTATAATGATTAATTTTCTCTTATGATGGTTAAATTACCAAGTTCAATGT
TTTGTTGGTCACGATCTTTTTAACATACCTTTCCTTTGACAGGGCTTAAT
AGCATAAAGAAGGAATTGCTTAATCTCTAAATCAATTATGATACTGCATT
CATCCCTTTTATCTTATTGCTATCAAATTGTATTTTAGACAGCGGCTCAA
TTCATTGTGCAAATCGCATTATTTACCAAAACAAAATTCGTGCAACGTAT
CTAGACACGTCAAACGTCAGACATGAAATCATAGAGGTCCATAAACACGA
GAGATTTGCTTTAAGATAAAGCCTACTATTGTCACTTCTCCACCGGAAAA
ACTGGGTCCCAGACtatctttgaagtgaatttccTCGAGTTTTCTAAACT
GTTAAAAGATTCATTTGCATTGGAgtacaatatgaaatatattttccaag
tTCAGAATTTTCGTCATATGTTCCAACGCGTTTTTAGTCAATCAGATTGC
TTACATTtttctagcctggatatcctgGATAGCCCCTTACGACTTCAGCG
GAATGAgtgcaagcaagcggactgtaTTCTGATCTGAGAaggcaaatcgc
tctagggagaccaggctgtaaatcagaacatgaaatatcaaaaactagac
tgtgaaatagtttacagcctggatatccaggctaatattCTTCATGTTAA
TGATAAACATGTTTACTGTTGAcgaatccaagatcttggattaagttcaa
agttgatattttttacgCGTCATTGAAAGCACAACTCAGAAATGTTATCA
acgcttttttaaaaagagtcagtaatagagaatcataacataaagatttG
TCTATTATGTCGGTTCCATTGAAGTAATATTACCATAATCCCATAATTAA
TATAATTATTgttgggaatcatgtagaagatttcttttgaaagaaactca
tttcaattacaatttctggggaattcgtcaaCAGTAAACATGTTTATCat
caataacatgaaaaatatTAGCCTGCATGTCCAGGATTGGattgttgaaa
ctttttttttatctatagtataggtaacacgaacaaatagtacaaaacaa
aagtttgaaagttgaaactttGCCACATGTTCAGAGAAGTGTAAAATATT
TATAGGTAACAGACCAAGGGAGGTAGAGAAATTCCAATTTTCTACATTTT
CGACTTATTCTCAAATTTGCCTTTaaacaatacacgtttttttttataag
gaacacgtttataaggaactcgaggctgaaaatggttcaaaaaataagga
attgtcaaggaactgctcaggctgagaataagtggatttgaaaataatgt
accttattgggactaatttgaccaaattttgatctttcaaggggcaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagtaaggaactcga
taaggaactttgagactgaaattctctgtaaaaataaggaactccaggct
cagagcaaagttaaggttccttataaaaaaaaaacgtgtacgccAACCCG
GATCCAGTCGTCCGGATCCAGCCTCACACCAAGCGTGAGTGTTCTGTAGT
ctcatttagaaaaaaatgcagGAAAATCATGCAGcgagaaaaaaagtaaa
aggaaGCGGTCCTTACCCCGAATATAAAAACAGGAAATTCAGTAGCGCTC
TCAAGGTTTCGGAAAGTTTGTGTAGGAGAGCGCAATTTTGTTGCGAAGTT
ATTATCTTTTAATTTTATGAATAGATAGTCactttgtcataaaaatctgc
tcttcGACACAAATTTTCCGACACCCCTGAGAACGCTCTTGTCGGAAACC
GGTCCAATTTAATTTAGACGTCCCTAATGCAAATCTAATAATTAACATAT
CAattaattcaattttaattATGCTTCCGCTCTCTcaatcaaaatattat
aaaagaaGCTTTCTTACGTGTAAGAGGCATCACTCGTCTTTTGATTCAAG
TCCAAAGTAAACTAACATGGTAGGTGTACTAATAACTTTGTGTAGGGATT
TTCATTATAAATCGGCGGTTATGGTTTTTATAGCCTACCATTTTTGCATT
GCATAACTTTATACTCGTTCTTTTTAGAATTCATTGTGCACCATCATCCT
ATTTGTGTGCGTGATCAACGCAGTATTTGGTCGTTATTACTATGACAACG
ATAGAGCACCATGGAAACAATACAACGAGAAAAGAGATGACAGACAACCG
TCGTTTCTAACGAGAGATTCCTTTAGACAAGACAATGAGAATTTTCCAAG
ATTGCAAGATTCAAGATTCGCAAGATTTCATGATTTCCAAAAAGAAGAGC
CAAACCCGAACCGCCCACTTCCGATCCCTTTGAAAGACGCAGTCCGGTAT
GTCCGACAATACGGGCCACATGCGGACATGTTGCGGGCAAAGGAAGAAAA
AGTGATGAGCTACAAATTCTCAGATGCAGTGAATCACTTTAGGAATAAGA
ACAAACGATCTGAAGAACCAAAGTGTCAACGTCGAACGGGTGACCCAAGT
GAGTGgaataaaatacaaatcaaACTGGTCCCCAGTTTTTTATTATTCAC
ATCTGAAATTAGTAAATCCAAGTCTATCAGAATTCTAATGTAATTATAGA
ACCACAATGTAAAATCTATTGTAAATTACGGGATAGTTGTCCGGGACAAT
TCATCCAGCAGGATCAACAATGTCCATAAGCTAACATTCATGGAAAACAA
TGTGTAATGTATATTTCATGTATTTGGCTATCCTTCGTCTTTTAGAATGC
AAACGAGACGTGAATGGTTGTGGATCTGGTTTCACTGAAGGAATCCCTTT
CTTTTTTCGTGAAGCTTTTACACCATGCTGCAACAAGCACGACGTCTGCT
ATGATTGTGTAAGTTCAAAAccctcccgccgatttttttccgtaccGCCA
TAAcaccataccgccatattttcctgTAACGGACAATAACATTGTCTACC
GTATGTCAAAAGGTTGAAGATTAAGAAATATATTAACCTATGACGATTAA
AATTAATTTAGGGCCCTGGGGACCATGTTTTAGAGTGTATTATATGTGGC
GAAAGCTTTGAATGCGGAAAAACAAAACATGGCGGGTgccaaaacttgat
ttaagtCCTTAATGGCCCTTAATGCTATCTTTTATTTCTGGTATTTTTCT
TGCAGGGTGTGACAGATTCTTGGACGCGAAAAGAATGCGATACAGCTTTT
TACAACGATATGGTGGATGTTTGTGAGTGCGAATATCCTAACTGGTCGCA
ATATGCACAATATCTGGCATGTCAGTTACGAGCATCTGAGTTATGGGCAG
CTGTTAATGTCTTCGCTGGATCATTTTTCGGTACCAAAGAGAAGGCAGTG
TGCAAACAACAATGTATCTTGCCCTATGGTAGTCCCAAAATAAGCTTGTT
GGAATAGTTCTGTCTTGCAATGAGCTTTAAAGATTTCTGCTCCTGGGTTG
TGACAAGCTAATCGAAACGGATATAACTTTCTAGTCATTTTTTTATGAGT
TTATACtatttttttaaccctttgagtgccagggtccttttttctaagtt
ttttttaaaaaatcgctagttcaaactttaagggcttatatctcctgatc
tagaaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaataacgatttctaac
tcaaactgggcattacaggagggcttcgccctcctatatagcccatgtcg
tatatatacgacatcggcacttaaagggttaacattTTGGTAATAATCTT
AGCCTGTAATTTTACTAGTACTAAAGAAAAGGAATACATTATAGTGGCAA
CCCAAATGCTGTAAATCTTTTTACTCAAGCCTTAATTGACGGCTTTAAAT
ATGGCTATCAAacaaacccttggaaaaattgaaaacttcttACAATACCG
GCCATAATAGTTAAGAACAAAGAGACATTATAGCCACAATATTTTAAGCG
CTCCAACTTAGTttcaactctgagttttaacatgagacttaaacttagga
tttgaggatccaaaagttcaaaaaagatCCAAAAGGGATCAGAATATGGC
CTGGAAGTCTTTAAACCCtacccaaattgaaatatccgattaaatctAAC
AAATAGCCCAAAAGCCACTTTCTCACccaaaaacgaggaattaaccaaaa
ttctcaatagacTTTGACCGATATTGTGGTCTTAGCTTTCTGCTCAAAAT
TTAGTTATTCTGAGCAATGACAAGTAGTTGAGAAATGGCAATTCTCTGGG
TTTCAAACTACCTATCCGCATTCTCAAAAAGGGCTAAGGATGGAAACTTA
TAAAACCATAGTAGCAGTTTTTCATGACATTTGGAGTTTAGATTTTCAAC
AAGGTAAAAAAGCTGCCTCGCGCCCGCGATAAGGTGAACAGTTAATTCTA
TGTGACAGCTCAATCCTTTTTCATTGACAAAAGATTGGTAGGATTCGTTT
TCATATTTCCCTCTTTATTCAGAATTCGCATTAACCAATTATAATCGTCG
CATCCTTAGCTTTATTGAATAAGCTAAATACTCATTAAGACTATACAAAT
ACCTTTGCATCAAAGTTAAAATCAGATAAAAGTCTTTATCTCTAGATAAG
TAAAATGAATAATAGCCTTTTAATCAACTAATTATGGAACGTCTACCGAT
ATATCGGTGGTATTAATGTATGATTTATGCAGTTGGAACATCGACCAAGG
TATCACAGGAGGTTAAAACAAGAGCTAGAAGTGATGgtatgaaattttct
ttaaatgtcTTCTACCAACAAAGGACATAGCAAATAACTCAATATTTGGA
CAATCTAAGTAATTTTTAGGGTATCTTAATTAGAGCGGGGAAAATTATCT
TTTTGATTCAGTATTTGGATCAAAAAGCCATCTAATCTATTGACATTTAA
GACAAAGTATCTATACACGATTCTAGTGctattaatttttctaaaaatgt
accTAAACGGTTTCTCTCTATAACCTATTAATATTTTTCGATACATTCTA
TTTTTATTCGGCAATTTAAACTTTAGAACTCCTTGAAAACGATCCTACTT
TTGTGTGTCGTCAATGCAGCATTTGGCCGTTATTACCATGACAACGTAAG
ATCACCACAAAGACAATATTATGAGCAGAGGGATAAGGACAAAAACCCTT
TTGAAAGGTAAGATATTATTCAATAGGCTGTTTGCAAACTTGTAAATGAG
AAATTCTTGTTACAAATTATCGAACATTGGCttcaacttttcctaattat
aCCAAAGTACCTTCCTAACAACTTTTCACCGCAGCTTTCATAGTGAAGTT
GTCTTTGCTACAAATCTACAGTATGAAAACATCTAGAATATCTTTAAGTC
GAATCATTTGATTTAACCAAAGCAATTGCAGAATCAACCTTAATAAACTT
CTCAAATCTATTTCTCAACTTCAGCAACATCCCTTTACCCTCTGACTttg
atgatgacgtcacagaCCAGCTAAAACATGACGATCCACACCATTACCGA
CCTTTACCACTCCCGATGAAAGATGCTATCCGATACGTGAGAAAATACGG
ACGGCACGCTGAATCGTTACGGAAGTTTGAAGACGAGTTGAGACGTTTAC
CTCGGTCACATGTCATGTTAGACCAACTCCGAAACGAGAAAAGATCACCG
TTTAAATGTCAAACTCGACCAAAAGATAAAGGTAGCATACGAGAATATTC
AGGAAGAAAGATACAAGAGTGTACATGGAAAAGAaaatatacacattttt
tataagcaaccaagtTGCTAAGGGTCCAGTTCTGGCCAAAAACAGCCAAA
TAATTAAGCAACTCAGCCTTAGCAACCTAGTCCTGAAACTGAGCATGAAC
CGGGAAAGCaactaaaaatctaaaaaagagGCATTTTTGGCATAATTTGG
CATTAAAATGGGTAGCGATCTTATTTGAATACCAAATTTGGGGTATTTTG
AAcataaaatgagataaaaagtcaaaacttttgaagttgCTAaacatttt
tggctcaaaatcaATAAGCaactttttggctgaaatccAGAATATCCGTA
GCAACTCCAACCCTGAGCCAAAAATTGGGTTACTCATAAAACAATGTGTA
CAAGGTTATATTGGGGAAAGATAGAGGTGTAAAGGCTAATACAGGTGTAC
ATGGTAATATGTAATAGTGTGCATTTGAAAGATACAAGTATACACAAAGA
AAATAACAGGGCAGGAGGGAAATATACAAGGGGTGTACATGGAAAATATA
GCGAAGATATTCAAGAAAAAGATGCACGGCCGTTTAGGGGTGTACATAGA
AACACACGGGAAAGATATAGGGGTGTGCATGGGAAATATACAGGGGCGTT
CATGGAAAAGCTGCGAGGTAAAATTTAACACGTCAAGGTACCATTTTTGA
TACTCCTAGAAAGACCTTAATTCACGTGTTGCGTTATTGAAAAGGTGTAG
AAATATCTTCCTATGGTTGTTTTGTAGTCCCACTTAGAGTTAGAGAAAGC
GGTGAAATTCATTTAGCTACTGTATTGTTTGTTATCAGgggaaatatttc
ttttcttttagcaTGCAAGCGAGACGTGAATGGTTGTGGATCTGGTTTCA
CTGCTTCTCTACCGCTTTTTTATCGTGAAGAATTTACACCATGCTGCAAT
AAACACGACGTTTGTTACGATTGTGTAAGTGTGCTTAGAAACTTCGAAGA
AGTACAATAATgacacctctgtctcacagccctggtaGGGCTTTTTCCta
gaatggggataaaaatttcgattgaaattccaatagggatagaaattata
ttgtttccAAGATTAAgatatccagtggggatggttttggagtgcaattt
ttggcattgaatttcaaatggggataaaaacaaagtcaatttccaagtgG
TACCGAAATTGTAGAGTTATTTTGTCCGctggggacaaaattttggccaa
attttccagtggggctgttAGTATggcaataatttttaaaatttttgtat
ttatcGAGGTCTGTTTACAGACAACAACAATAATAAATAAGTTAAAGCCC
TTAAAACCTATTTTGACCGTGATTGGACCGTACGGGTAAATTGTTTTTAG
AAGTATCGACTAAATAATTTTTAAGGATATCTACTTCTAGTGTGTTGCTA
GGTAGCATTGCAACCACGACATACCTTCTGCTTTCCGTTGAAACCATGAA
TGAGTTATTCATACTAGTAACATAAGATCaatgtcaattttatttttctt
agggCGTCACACGTCATTGGACGAGAGAACAATGCGACAATAAATTTTAT
GATGATATGGAAAACACATGTAGCTGTTTATACCCTAGTTGGTATCAATA
CCCTGCCTACAAAACATGCAAATTGTGGGCTTCTACCTTATACGCTGTTG
TTGATGTCTTCAGTGCAAGCTATTTTGGAACAAAGGTTAAAGATGTTTGT
AAATCAAAATGCATTTTACCATACGGTAGTCCCCAGATCTCGTTATTAGG
CTAATAGAATATTTTCATGATCCAATCCGTTGACTCTGGTCATTTTCCTG
GTCAGAACTTACATTCAACTAGCGGACACTCCATTTATCGGacatatttt
tttaatgaaatagtGAAGTTCCATTTTATCCTAGGGATAAATTTAGTCTG
AACCgcaaacctctatagatatacttcctatataagaaactttttcgcta
gaggatgagcagaagcctagggAAAATTGGTCTTTATAGtccaaattttt
tcaacatttgcCTTGACCGCAAATCTTTCAATGTAGgataatttttgtat
aaaaattttgtttcaatatcattttcaactactttttttgcttttatgtC
CTTAGCTTGTTTAGCTGAAACGAATATTTGAATTTTGGCACACAGGCTTT
TACTAAAATCTATCTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057941TCONS_00057941Clytia hemisphaericatranscript
TCONS_00057942TCONS_00057942Clytia hemisphaericatranscript
TCONS_00057943TCONS_00057943Clytia hemisphaericatranscript
TCONS_00057944TCONS_00057944Clytia hemisphaericatranscript
TCONS_00057945TCONS_00057945Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057945-proteinTCONS_00057945-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:387160..397377 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.03	2.07	1.49	1.6	289.57	238.29	513.19	557.17	919.05	950.14	350.62	705.45	30.05	26.91	11.03	6.06	497.79	452.4	120.16	104.08	15.97	15.45	25.38	32.07	20.6	24.23	230.65	161.45	1.22	0.94